RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 GPATCH4Q5T3I0 446 aaKnown RBP14.19□□□□□ -0.14
HDAC8-217ENST00000478743 CABP7Q86V35 215 aa14.19□□□□□ -0.14
HDAC8-217ENST00000478743 FCHSD1Q86WN1 690 aa14.19□□□□□ -0.14
HDAC8-217ENST00000478743 PANK1Q8TE04 598 aa14.19□□□□□ -0.14
HDAC8-217ENST00000478743 BCL7CQ8WUZ0 217 aaPredicted RBP14.19□□□□□ -0.14
HDAC8-217ENST00000478743 ZBP1Q9H171 429 aa14.19□□□□□ -0.14
HDAC8-217ENST00000478743 ECHDC1Q9NTX5 307 aa14.19□□□□□ -0.14
HDAC8-217ENST00000478743 SPG21Q9NZD8 308 aa14.19□□□□□ -0.14
HDAC8-217ENST00000478743 CNOT1A5YKK6 2376 aaKnown RBP14.18□□□□□ -0.14
HDAC8-217ENST00000478743 GSTTP1A0A1W2PQM5 241 aa14.18□□□□□ -0.14
HDAC8-217ENST00000478743 LAMTOR5O43504 91 aa14.18□□□□□ -0.14
HDAC8-217ENST00000478743 METAP2P50579 478 aaKnown RBP eCLIP14.18□□□□□ -0.14
HDAC8-217ENST00000478743 LETM2Q2VYF4 491 aa14.18□□□□□ -0.14
HDAC8-217ENST00000478743 IER5Q5VY09 327 aa14.18□□□□□ -0.14
HDAC8-217ENST00000478743 DCLRE1AQ6PJP8 1040 aa14.18□□□□□ -0.14
HDAC8-217ENST00000478743 ATRIPQ8WXE1 791 aa14.18□□□□□ -0.14
HDAC8-217ENST00000478743 NELL1Q92832 810 aa14.18□□□□□ -0.14
HDAC8-217ENST00000478743 SFXN1Q9H9B4 322 aa14.18□□□□□ -0.14
HDAC8-217ENST00000478743 FBXO4Q9UKT5 387 aa14.18□□□□□ -0.14
HDAC8-217ENST00000478743 FRMPD4Q14CM0 1322 aa14.17□□□□□ -0.14
HDAC8-217ENST00000478743 DENND3A2RUS2 1198 aa14.17□□□□□ -0.14
HDAC8-217ENST00000478743 CYSRT1A8MQ03 144 aa14.17□□□□□ -0.14
HDAC8-217ENST00000478743 INSRRP14616 1297 aa14.17□□□□□ -0.14
HDAC8-217ENST00000478743 GBP2P32456 591 aaPredicted RBP14.17□□□□□ -0.14
HDAC8-217ENST00000478743 PPM1AP35813 382 aa14.17□□□□□ -0.14
HDAC8-217ENST00000478743 KRT17Q04695 432 aa14.17□□□□□ -0.14
HDAC8-217ENST00000478743 NEDD9Q14511 834 aa14.17□□□□□ -0.14
HDAC8-217ENST00000478743 PTPN14Q15678 1187 aa14.17□□□□□ -0.14
HDAC8-217ENST00000478743 SLC24A5Q71RS6 500 aa14.17□□□□□ -0.14
HDAC8-217ENST00000478743 SECISBP2LQ93073 1101 aaKnown RBP14.17□□□□□ -0.14
HDAC8-217ENST00000478743 PPP1R16BQ96T49 567 aa14.17□□□□□ -0.14
HDAC8-217ENST00000478743 PCYT2Q99447 389 aa14.17□□□□□ -0.14
HDAC8-217ENST00000478743 TMEM117Q9H0C3 514 aa14.17□□□□□ -0.14
HDAC8-217ENST00000478743 ATP6V0A4Q9HBG4 840 aa14.17□□□□□ -0.14
HDAC8-217ENST00000478743 TMEM161AQ9NX61 479 aa14.17□□□□□ -0.14
HDAC8-217ENST00000478743 ZSCAN32Q9NX65 697 aa14.17□□□□□ -0.14
HDAC8-217ENST00000478743 GINS2Q9Y248 185 aa14.17□□□□□ -0.14
HDAC8-217ENST00000478743 PCDHA1Q9Y5I3 950 aa14.17□□□□□ -0.14
HDAC8-217ENST00000478743 RALGAPA1Q6GYQ0 2036 aa14.17□□□□□ -0.14
HDAC8-217ENST00000478743 SMG1Q96Q15 3661 aaKnown RBP14.17□□□□□ -0.14
HDAC8-217ENST00000478743 LOC400499M0QZD8 3231 aa14.17□□□□□ -0.14
HDAC8-217ENST00000478743 KDM3AQ9Y4C1 1321 aa14.16□□□□□ -0.14
HDAC8-217ENST00000478743 ASH1LQ9NR48 2969 aaKnown RBP14.16□□□□□ -0.14
HDAC8-217ENST00000478743 DHX16O60231 1041 aaKnown RBP14.16□□□□□ -0.14
HDAC8-217ENST00000478743 ATP9AO75110 1047 aa14.16□□□□□ -0.14
HDAC8-217ENST00000478743 MYBP10242 640 aa14.16□□□□□ -0.14
HDAC8-217ENST00000478743 HAND2P61296 217 aa14.16□□□□□ -0.14
HDAC8-217ENST00000478743 SLC35G1Q2M3R5 365 aa14.16□□□□□ -0.14
HDAC8-217ENST00000478743 CLLU1OSQ5K130 101 aa14.16□□□□□ -0.14
HDAC8-217ENST00000478743 VPS52Q8N1B4 723 aa14.16□□□□□ -0.14
HDAC8-217ENST00000478743 LRRC43Q8N309 656 aa14.16□□□□□ -0.14
HDAC8-217ENST00000478743 RPP25Q9BUL9 199 aaKnown RBP14.16□□□□□ -0.14
HDAC8-217ENST00000478743 VN1R3Q9BXE9 311 aa14.16□□□□□ -0.14
HDAC8-217ENST00000478743 C1orf112Q9NSG2 853 aa14.16□□□□□ -0.14
HDAC8-217ENST00000478743 GMEB2Q9UKD1 530 aa14.16□□□□□ -0.14
HDAC8-217ENST00000478743 ST3GAL5Q9UNP4 418 aa14.16□□□□□ -0.14
HDAC8-217ENST00000478743 M0QZ92 97 aa14.15□□□□□ -0.14
HDAC8-217ENST00000478743 FIBPO43427 364 aa14.15□□□□□ -0.14
HDAC8-217ENST00000478743 STARD6P59095 220 aa14.15□□□□□ -0.14
HDAC8-217ENST00000478743 FAM189BP81408 668 aa14.15□□□□□ -0.14
HDAC8-217ENST00000478743 KRT76Q01546 638 aa14.15□□□□□ -0.14
HDAC8-217ENST00000478743 RING1Q06587 406 aa14.15□□□□□ -0.14
HDAC8-217ENST00000478743 DSC3Q14574 896 aa14.15□□□□□ -0.14
HDAC8-217ENST00000478743 PLCB4Q15147 1175 aa14.15□□□□□ -0.14
HDAC8-217ENST00000478743 UNQ6494/PRO21346Q6UXR6 183 aa14.15□□□□□ -0.14
HDAC8-217ENST00000478743 PRR23CQ6ZRP0 262 aa14.15□□□□□ -0.14
HDAC8-217ENST00000478743 FAM228AQ86W67 206 aa14.15□□□□□ -0.14
HDAC8-217ENST00000478743 TBC1D10CQ8IV04 446 aa14.15□□□□□ -0.14
HDAC8-217ENST00000478743 STAG2Q8N3U4 1231 aa14.15□□□□□ -0.14
HDAC8-217ENST00000478743 GLG1Q92896 1179 aa14.15□□□□□ -0.14
HDAC8-217ENST00000478743 TMEM121BQ9BXQ6 578 aaPredicted RBP14.15□□□□□ -0.14
HDAC8-217ENST00000478743 ERAP1Q9NZ08 941 aa14.15□□□□□ -0.14
HDAC8-217ENST00000478743 EPS15L1Q9UBC2 864 aa14.15□□□□□ -0.14
HDAC8-217ENST00000478743 AKAP13Q12802 2813 aa14.15□□□□□ -0.14
HDAC8-217ENST00000478743 EVPLQ92817 2033 aa14.15□□□□□ -0.14
HDAC8-217ENST00000478743 CLUHO75153 1309 aa14.15□□□□□ -0.15
HDAC8-217ENST00000478743 NEDD4P46934 1319 aa14.15□□□□□ -0.15
HDAC8-217ENST00000478743 RPS6KA5O75582 802 aa14.14□□□□□ -0.15
HDAC8-217ENST00000478743 CD72P21854 359 aa14.14□□□□□ -0.15
HDAC8-217ENST00000478743 LRSAM1Q6UWE0 723 aa14.14□□□□□ -0.15
HDAC8-217ENST00000478743 PNMA1Q8ND90 353 aa14.14□□□□□ -0.15
HDAC8-217ENST00000478743 AMNQ9BXJ7 453 aa14.14□□□□□ -0.15
HDAC8-217ENST00000478743 SEMA4GQ9NTN9 838 aa14.14□□□□□ -0.15
HDAC8-217ENST00000478743 PCDHA2Q9Y5H9 948 aa14.14□□□□□ -0.15
HDAC8-217ENST00000478743 DOCK6Q96HP0 2047 aa14.14□□□□□ -0.15
HDAC8-217ENST00000478743 FLNBO75369 2602 aaKnown RBP14.13□□□□□ -0.15
HDAC8-217ENST00000478743 TBC1D4O60343 1298 aa14.13□□□□□ -0.15
HDAC8-217ENST00000478743 CTSAP10619 480 aa14.13□□□□□ -0.15
HDAC8-217ENST00000478743 KCNA2P16389 499 aa14.13□□□□□ -0.15
HDAC8-217ENST00000478743 SPINK2P20155 84 aa14.13□□□□□ -0.15
HDAC8-217ENST00000478743 CLCN4P51793 760 aa14.13□□□□□ -0.15
HDAC8-217ENST00000478743 BCAR1P56945 870 aa14.13□□□□□ -0.15
HDAC8-217ENST00000478743 SNW1Q13573 536 aaKnown RBP14.13□□□□□ -0.15
HDAC8-217ENST00000478743 HTR4Q13639 388 aa14.13□□□□□ -0.15
HDAC8-217ENST00000478743 UBXN2BQ14CS0 331 aa14.13□□□□□ -0.15
HDAC8-217ENST00000478743 GNPTABQ3T906 1256 aa14.13□□□□□ -0.15
HDAC8-217ENST00000478743 BBXQ8WY36 941 aaPredicted RBP14.13□□□□□ -0.15
HDAC8-217ENST00000478743 MAP4K1Q92918 833 aa14.13□□□□□ -0.15
HDAC8-217ENST00000478743 TTC14Q96N46 770 aa14.13□□□□□ -0.15
HDAC8-217ENST00000478743 DDX23Q9BUQ8 820 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms