RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 KIAA1586Q9HCI6 787 aa15.34■□□□□ 0.05
NPHP4-208ENST00000478423 ZNF302Q9NR11 478 aa15.34■□□□□ 0.05
NPHP4-208ENST00000478423 WDR46O15213 610 aaKnown RBP15.33■□□□□ 0.05
NPHP4-208ENST00000478423 ATP8B1O43520 1251 aa15.33■□□□□ 0.05
NPHP4-208ENST00000478423 PALMO75781 387 aa15.33■□□□□ 0.05
NPHP4-208ENST00000478423 MYO1EQ12965 1108 aa15.33■□□□□ 0.05
NPHP4-208ENST00000478423 ZNF667Q5HYK9 610 aa15.33■□□□□ 0.05
NPHP4-208ENST00000478423 STYK1Q6J9G0 422 aa15.33■□□□□ 0.05
NPHP4-208ENST00000478423 PPP1R2P3Q6NXS1 205 aa15.33■□□□□ 0.05
NPHP4-208ENST00000478423 ADGRA1Q86SQ6 560 aa15.33■□□□□ 0.05
NPHP4-208ENST00000478423 COL23A1Q86Y22 540 aaPredicted RBP15.33■□□□□ 0.05
NPHP4-208ENST00000478423 ATP2A3Q93084 1043 aa15.33■□□□□ 0.05
NPHP4-208ENST00000478423 SAAL1Q96ER3 474 aa15.33■□□□□ 0.05
NPHP4-208ENST00000478423 TEX13BQ9BXU2 312 aa15.33■□□□□ 0.05
NPHP4-208ENST00000478423 MAD1L1Q9Y6D9 718 aa15.33■□□□□ 0.05
NPHP4-208ENST00000478423 COL5A2P05997 1499 aaPredicted RBP15.33■□□□□ 0.05
NPHP4-208ENST00000478423 RNF40O75150 1001 aa15.33■□□□□ 0.04
NPHP4-208ENST00000478423 VAMP7P51809 220 aa15.33■□□□□ 0.04
NPHP4-208ENST00000478423 APBA1Q02410 837 aa15.33■□□□□ 0.04
NPHP4-208ENST00000478423 TTC31Q49AM3 519 aaPredicted RBP15.33■□□□□ 0.04
NPHP4-208ENST00000478423 RSRC2Q7L4I2 434 aaKnown RBP15.33■□□□□ 0.04
NPHP4-208ENST00000478423 CCDC13Q8IYE1 715 aa15.33■□□□□ 0.04
NPHP4-208ENST00000478423 ABI1Q8IZP0 508 aa15.33■□□□□ 0.04
NPHP4-208ENST00000478423 NBPF3Q9H094 633 aa15.33■□□□□ 0.04
NPHP4-208ENST00000478423 SLIT1O75093 1534 aa15.33■□□□□ 0.04
NPHP4-208ENST00000478423 MYMKA6NI61 221 aa15.33■□□□□ 0.04
NPHP4-208ENST00000478423 MED7O43513 233 aa15.33■□□□□ 0.04
NPHP4-208ENST00000478423 RHOBTB3O94955 611 aa15.33■□□□□ 0.04
NPHP4-208ENST00000478423 ECEL1O95672 775 aa15.33■□□□□ 0.04
NPHP4-208ENST00000478423 DYNLT1P63172 113 aa15.33■□□□□ 0.04
NPHP4-208ENST00000478423 OR6B2Q6IFH4 312 aa15.33■□□□□ 0.04
NPHP4-208ENST00000478423 RFX6Q8HWS3 928 aa15.33■□□□□ 0.04
NPHP4-208ENST00000478423 NPHP3-ACAD11A0A0J9YXS1 232 aa15.33■□□□□ 0.04
NPHP4-208ENST00000478423 BUB1BO60566 1050 aaPredicted RBP15.33■□□□□ 0.04
NPHP4-208ENST00000478423 HIP1RO75146 1068 aa15.33■□□□□ 0.04
NPHP4-208ENST00000478423 DPEP1P16444 411 aa15.33■□□□□ 0.04
NPHP4-208ENST00000478423 DHX9Q08211 1270 aaKnown RBP15.33■□□□□ 0.04
NPHP4-208ENST00000478423 DRAP1Q14919 205 aaPredicted RBP15.33■□□□□ 0.04
NPHP4-208ENST00000478423 CYP4F22Q6NT55 531 aa15.33■□□□□ 0.04
NPHP4-208ENST00000478423 PNMA8AQ86V59 439 aaPredicted RBP15.33■□□□□ 0.04
NPHP4-208ENST00000478423 C2orf69Q8N8R5 385 aa15.33■□□□□ 0.04
NPHP4-208ENST00000478423 RASSF4Q9H2L5 321 aa15.33■□□□□ 0.04
NPHP4-208ENST00000478423 SEPT10Q9P0V9 454 aa15.33■□□□□ 0.04
NPHP4-208ENST00000478423 I3L4J1 428 aa15.32■□□□□ 0.04
NPHP4-208ENST00000478423 FGGP02679 453 aa15.32■□□□□ 0.04
NPHP4-208ENST00000478423 KRT1P04264 644 aa15.32■□□□□ 0.04
NPHP4-208ENST00000478423 RINT1Q6NUQ1 792 aa15.32■□□□□ 0.04
NPHP4-208ENST00000478423 CYFIP1Q7L576 1253 aa15.32■□□□□ 0.04
NPHP4-208ENST00000478423 KSR1Q8IVT5 923 aa15.32■□□□□ 0.04
NPHP4-208ENST00000478423 ADAM22Q9P0K1 906 aa15.32■□□□□ 0.04
NPHP4-208ENST00000478423 ARHGAP23Q9P227 1491 aa15.32■□□□□ 0.04
NPHP4-208ENST00000478423 KIF20BQ96Q89 1820 aa15.32■□□□□ 0.04
NPHP4-208ENST00000478423 A0A1B0GTH6 734 aa15.32■□□□□ 0.04
NPHP4-208ENST00000478423 SMARCA1P28370 1054 aa15.32■□□□□ 0.04
NPHP4-208ENST00000478423 SLC12A2P55011 1212 aa15.32■□□□□ 0.04
NPHP4-208ENST00000478423 ANKRD20A3Q5VUR7 823 aa15.32■□□□□ 0.04
NPHP4-208ENST00000478423 HEXIM2Q96MH2 286 aaKnown RBP15.32■□□□□ 0.04
NPHP4-208ENST00000478423 POC1B-GALNT4F8VUJ3 575 aa15.32■□□□□ 0.04
NPHP4-208ENST00000478423 PPP2R5CQ13362 524 aa15.32■□□□□ 0.04
NPHP4-208ENST00000478423 C7orf25Q9BPX7 421 aa15.32■□□□□ 0.04
NPHP4-208ENST00000478423 LIMA1Q9UHB6 759 aaKnown RBP15.32■□□□□ 0.04
NPHP4-208ENST00000478423 MAD2L2Q9UI95 211 aa15.32■□□□□ 0.04
NPHP4-208ENST00000478423 ABT1Q9ULW3 272 aaKnown RBP15.32■□□□□ 0.04
NPHP4-208ENST00000478423 ZNF131P52739 623 aa15.31■□□□□ 0.04
NPHP4-208ENST00000478423 HDLBPQ00341 1268 aaKnown RBP15.31■□□□□ 0.04
NPHP4-208ENST00000478423 NAA30Q147X3 362 aaPredicted RBP15.31■□□□□ 0.04
NPHP4-208ENST00000478423 ZNF568Q3ZCX4 644 aa15.31■□□□□ 0.04
NPHP4-208ENST00000478423 ERICH1Q86X53 443 aa15.31■□□□□ 0.04
NPHP4-208ENST00000478423 LRRC4Q9HBW1 653 aa15.31■□□□□ 0.04
NPHP4-208ENST00000478423 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.31■□□□□ 0.04
NPHP4-208ENST00000478423 CNOT8Q9UFF9 292 aaKnown RBP15.31■□□□□ 0.04
NPHP4-208ENST00000478423 ESYT2A0FGR8 921 aa15.31■□□□□ 0.04
NPHP4-208ENST00000478423 PDXKO00764 312 aa15.31■□□□□ 0.04
NPHP4-208ENST00000478423 ZSCAN20P17040 1043 aaPredicted RBP15.31■□□□□ 0.04
NPHP4-208ENST00000478423 ARHGAP25P42331 645 aa15.31■□□□□ 0.04
NPHP4-208ENST00000478423 YWHAGP61981 247 aaKnown RBP eCLIP15.31■□□□□ 0.04
NPHP4-208ENST00000478423 GABPAQ06546 454 aa15.31■□□□□ 0.04
NPHP4-208ENST00000478423 PTPAQ15257 358 aa15.31■□□□□ 0.04
NPHP4-208ENST00000478423 ANGEL2Q5VTE6 544 aaKnown RBP15.31■□□□□ 0.04
NPHP4-208ENST00000478423 SMC1BQ8NDV3 1235 aa15.31■□□□□ 0.04
NPHP4-208ENST00000478423 PRMT6Q96LA8 375 aaPredicted RBP15.31■□□□□ 0.04
NPHP4-208ENST00000478423 MTRQ99707 1265 aa15.31■□□□□ 0.04
NPHP4-208ENST00000478423 TUFT1Q9NNX1 390 aa15.31■□□□□ 0.04
NPHP4-208ENST00000478423 ANAPC7Q9UJX3 599 aa15.31■□□□□ 0.04
NPHP4-208ENST00000478423 ODF2LQ9ULJ1 636 aa15.31■□□□□ 0.04
NPHP4-208ENST00000478423 TBX3O15119 743 aa15.31■□□□□ 0.04
NPHP4-208ENST00000478423 SEC23AQ15436 765 aa15.31■□□□□ 0.04
NPHP4-208ENST00000478423 ZNF746Q6NUN9 644 aaPredicted RBP15.31■□□□□ 0.04
NPHP4-208ENST00000478423 TMEM270Q6UE05 265 aa15.31■□□□□ 0.04
NPHP4-208ENST00000478423 ZNF280CQ8ND82 737 aa15.31■□□□□ 0.04
NPHP4-208ENST00000478423 PPM1EQ8WY54 764 aa15.31■□□□□ 0.04
NPHP4-208ENST00000478423 CHP1Q99653 195 aa15.31■□□□□ 0.04
NPHP4-208ENST00000478423 IRX2Q9BZI1 471 aaPredicted RBP15.31■□□□□ 0.04
NPHP4-208ENST00000478423 ABCB6Q9NP58 842 aa15.31■□□□□ 0.04
NPHP4-208ENST00000478423 ANO9A1A5B4 782 aa15.31■□□□□ 0.04
NPHP4-208ENST00000478423 SRGNP10124 158 aa15.31■□□□□ 0.04
NPHP4-208ENST00000478423 TTLL4Q14679 1199 aa15.31■□□□□ 0.04
NPHP4-208ENST00000478423 TTC19Q6DKK2 380 aaPredicted RBP15.31■□□□□ 0.04
NPHP4-208ENST00000478423 DEFB132Q7Z7B7 95 aa15.31■□□□□ 0.04
NPHP4-208ENST00000478423 SLC4A9Q96Q91 983 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms