RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 MAGOHP61326 146 aaKnown RBP14.71□□□□□ -0.05
HLA-DMA-208ENST00000477541 LMNB2Q03252 620 aa14.71□□□□□ -0.05
HLA-DMA-208ENST00000477541 ARID5AQ03989 594 aa14.71□□□□□ -0.05
HLA-DMA-208ENST00000477541 DHX9Q08211 1270 aaKnown RBP14.71□□□□□ -0.05
HLA-DMA-208ENST00000477541 RIPK1Q13546 671 aa14.71□□□□□ -0.05
HLA-DMA-208ENST00000477541 TRADDQ15628 312 aa14.71□□□□□ -0.05
HLA-DMA-208ENST00000477541 ECM1Q16610 540 aa14.71□□□□□ -0.05
HLA-DMA-208ENST00000477541 CRELD2Q6UXH1 353 aaPredicted RBP14.71□□□□□ -0.05
HLA-DMA-208ENST00000477541 NBPF5PQ86XG9 351 aaPredicted RBP14.71□□□□□ -0.05
HLA-DMA-208ENST00000477541 TEX2Q8IWB9 1127 aa14.71□□□□□ -0.05
HLA-DMA-208ENST00000477541 CCHCR1Q8TD31 782 aa14.71□□□□□ -0.05
HLA-DMA-208ENST00000477541 RFFLQ8WZ73 363 aa14.71□□□□□ -0.05
HLA-DMA-208ENST00000477541 MAGOHBQ96A72 148 aaKnown RBP14.71□□□□□ -0.05
HLA-DMA-208ENST00000477541 NSRP1Q9H0G5 558 aaKnown RBP14.71□□□□□ -0.05
HLA-DMA-208ENST00000477541 DDX47Q9H0S4 455 aaKnown RBP14.71□□□□□ -0.05
HLA-DMA-208ENST00000477541 NEUROG2Q9H2A3 272 aa14.71□□□□□ -0.05
HLA-DMA-208ENST00000477541 DHX36Q9H2U1 1008 aaKnown RBP14.71□□□□□ -0.05
HLA-DMA-208ENST00000477541 VAT1LQ9HCJ6 419 aa14.71□□□□□ -0.05
HLA-DMA-208ENST00000477541 KCNMB3Q9NPA1 279 aa14.71□□□□□ -0.05
HLA-DMA-208ENST00000477541 MTMR7Q9Y216 660 aa14.71□□□□□ -0.05
HLA-DMA-208ENST00000477541 GAKO14976 1311 aa14.71□□□□□ -0.05
HLA-DMA-208ENST00000477541 LOC102724159A0A0B4J2E5 919 aa14.7□□□□□ -0.06
HLA-DMA-208ENST00000477541 PPP1R12BO60237 982 aaPredicted RBP14.7□□□□□ -0.06
HLA-DMA-208ENST00000477541 GGPS1O95749 300 aa14.7□□□□□ -0.06
HLA-DMA-208ENST00000477541 ELF1P32519 619 aa14.7□□□□□ -0.06
HLA-DMA-208ENST00000477541 ADCY2Q08462 1091 aa14.7□□□□□ -0.06
HLA-DMA-208ENST00000477541 ZNF543Q08ER8 600 aa14.7□□□□□ -0.06
HLA-DMA-208ENST00000477541 SLMAPQ14BN4 828 aa14.7□□□□□ -0.06
HLA-DMA-208ENST00000477541 TCEAL1Q15170 157 aa14.7□□□□□ -0.06
HLA-DMA-208ENST00000477541 PWP2Q15269 919 aaKnown RBP14.7□□□□□ -0.06
HLA-DMA-208ENST00000477541 TBC1D9BQ66K14 1250 aa14.7□□□□□ -0.06
HLA-DMA-208ENST00000477541 DUPD1Q68J44 220 aa14.7□□□□□ -0.06
HLA-DMA-208ENST00000477541 BICDL1Q6ZP65 573 aa14.7□□□□□ -0.06
HLA-DMA-208ENST00000477541 DAAM2Q86T65 1068 aa14.7□□□□□ -0.06
HLA-DMA-208ENST00000477541 COL23A1Q86Y22 540 aaPredicted RBP14.7□□□□□ -0.06
HLA-DMA-208ENST00000477541 GPATCH11Q8N954 259 aa14.7□□□□□ -0.06
HLA-DMA-208ENST00000477541 NEK9Q8TD19 979 aa14.7□□□□□ -0.06
HLA-DMA-208ENST00000477541 TBC1D22AQ8WUA7 517 aa14.7□□□□□ -0.06
HLA-DMA-208ENST00000477541 MKNK1Q9BUB5 465 aa14.7□□□□□ -0.06
HLA-DMA-208ENST00000477541 GREB1LQ9C091 1923 aaPredicted RBP14.7□□□□□ -0.06
HLA-DMA-208ENST00000477541 CPVLQ9H3G5 476 aa14.7□□□□□ -0.06
HLA-DMA-208ENST00000477541 ATP6V0A4Q9HBG4 840 aa14.7□□□□□ -0.06
HLA-DMA-208ENST00000477541 KIAA1024Q9UPX6 916 aa14.7□□□□□ -0.06
HLA-DMA-208ENST00000477541 UBE4BO95155 1302 aa14.69□□□□□ -0.06
HLA-DMA-208ENST00000477541 CCT8L1PA6NM43 557 aa14.69□□□□□ -0.06
HLA-DMA-208ENST00000477541 AGTP01019 485 aa14.69□□□□□ -0.06
HLA-DMA-208ENST00000477541 SSBP05455 408 aaKnown RBP eCLIP14.69□□□□□ -0.06
HLA-DMA-208ENST00000477541 GAP43P17677 238 aa14.69□□□□□ -0.06
HLA-DMA-208ENST00000477541 TM4SF1P30408 202 aa14.69□□□□□ -0.06
HLA-DMA-208ENST00000477541 MMP13P45452 471 aa14.69□□□□□ -0.06
HLA-DMA-208ENST00000477541 AP3B2Q13367 1082 aa14.69□□□□□ -0.06
HLA-DMA-208ENST00000477541 C6orf118Q5T5N4 469 aa14.69□□□□□ -0.06
HLA-DMA-208ENST00000477541 NELFCDQ8IXH7 590 aa14.69□□□□□ -0.06
HLA-DMA-208ENST00000477541 SYT2Q8N9I0 419 aaPredicted RBP14.69□□□□□ -0.06
HLA-DMA-208ENST00000477541 COA7Q96BR5 231 aa14.69□□□□□ -0.06
HLA-DMA-208ENST00000477541 HVCN1Q96D96 273 aa14.69□□□□□ -0.06
HLA-DMA-208ENST00000477541 ERP44Q9BS26 406 aa14.69□□□□□ -0.06
HLA-DMA-208ENST00000477541 AP1M1Q9BXS5 423 aa14.69□□□□□ -0.06
HLA-DMA-208ENST00000477541 PABPC3Q9H361 631 aaKnown RBP14.69□□□□□ -0.06
HLA-DMA-208ENST00000477541 AMACRQ9UHK6 382 aa14.69□□□□□ -0.06
HLA-DMA-208ENST00000477541 SAP30BPQ9UHR5 308 aaKnown RBP14.69□□□□□ -0.06
HLA-DMA-208ENST00000477541 PFASO15067 1338 aa14.69□□□□□ -0.06
HLA-DMA-208ENST00000477541 SYNGAP1Q96PV0 1343 aa14.69□□□□□ -0.06
HLA-DMA-208ENST00000477541 MIF4GDA9UHW6 222 aaKnown RBP14.69□□□□□ -0.06
HLA-DMA-208ENST00000477541 ZBTB5O15062 677 aa14.69□□□□□ -0.06
HLA-DMA-208ENST00000477541 TTI1O43156 1089 aa14.69□□□□□ -0.06
HLA-DMA-208ENST00000477541 RNASE9P60153 205 aaKnown RBP14.69□□□□□ -0.06
HLA-DMA-208ENST00000477541 DIXDC1Q155Q3 683 aa14.69□□□□□ -0.06
HLA-DMA-208ENST00000477541 SLC4A8Q2Y0W8 1093 aa14.69□□□□□ -0.06
HLA-DMA-208ENST00000477541 TXNRD3Q86VQ6 643 aa14.69□□□□□ -0.06
HLA-DMA-208ENST00000477541 MARCH10Q8NA82 808 aaPredicted RBP14.69□□□□□ -0.06
HLA-DMA-208ENST00000477541 SLC30A5Q8TAD4 765 aa14.69□□□□□ -0.06
HLA-DMA-208ENST00000477541 MORC4Q8TE76 937 aa14.69□□□□□ -0.06
HLA-DMA-208ENST00000477541 PLCD4Q9BRC7 762 aa14.69□□□□□ -0.06
HLA-DMA-208ENST00000477541 UBA5Q9GZZ9 404 aa14.69□□□□□ -0.06
HLA-DMA-208ENST00000477541 JMJD4Q9H9V9 463 aa14.69□□□□□ -0.06
HLA-DMA-208ENST00000477541 VEZTQ9HBM0 779 aa14.69□□□□□ -0.06
HLA-DMA-208ENST00000477541 SIX2Q9NPC8 291 aa14.69□□□□□ -0.06
HLA-DMA-208ENST00000477541 BCCIPQ9P287 314 aaKnown RBP eCLIP14.69□□□□□ -0.06
HLA-DMA-208ENST00000477541 CNOT8Q9UFF9 292 aaKnown RBP14.69□□□□□ -0.06
HLA-DMA-208ENST00000477541 ODF2LQ9ULJ1 636 aa14.69□□□□□ -0.06
HLA-DMA-208ENST00000477541 E9PMD0 336 aa14.68□□□□□ -0.06
HLA-DMA-208ENST00000477541 DNM1LO00429 736 aa14.68□□□□□ -0.06
HLA-DMA-208ENST00000477541 PODXLO00592 558 aa14.68□□□□□ -0.06
HLA-DMA-208ENST00000477541 EIF3DO15371 548 aaKnown RBP eCLIP14.68□□□□□ -0.06
HLA-DMA-208ENST00000477541 PPIP5K2O43314 1243 aa14.68□□□□□ -0.06
HLA-DMA-208ENST00000477541 ZPR1O75312 459 aa14.68□□□□□ -0.06
HLA-DMA-208ENST00000477541 TTLL1O95922 423 aa14.68□□□□□ -0.06
HLA-DMA-208ENST00000477541 SLC9A1P19634 815 aa14.68□□□□□ -0.06
HLA-DMA-208ENST00000477541 DR1Q01658 176 aa14.68□□□□□ -0.06
HLA-DMA-208ENST00000477541 PPATQ06203 517 aa14.68□□□□□ -0.06
HLA-DMA-208ENST00000477541 GRAPQ13588 217 aa14.68□□□□□ -0.06
HLA-DMA-208ENST00000477541 QPCTQ16769 361 aa14.68□□□□□ -0.06
HLA-DMA-208ENST00000477541 DENND2CQ68D51 928 aa14.68□□□□□ -0.06
HLA-DMA-208ENST00000477541 MSL1Q68DK7 614 aa14.68□□□□□ -0.06
HLA-DMA-208ENST00000477541 PIGWQ7Z7B1 504 aa14.68□□□□□ -0.06
HLA-DMA-208ENST00000477541 DDX42Q86XP3 938 aaKnown RBP eCLIP14.68□□□□□ -0.06
HLA-DMA-208ENST00000477541 OR2W6PQ8NHA6 318 aa14.68□□□□□ -0.06
HLA-DMA-208ENST00000477541 RBM46Q8TBY0 533 aaKnown RBP14.68□□□□□ -0.06
HLA-DMA-208ENST00000477541 GRAPLQ8TC17 118 aaPredicted RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms