RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 FHOD1Q9Y613 1164 aa14.68□□□□□ -0.06
HDAC7-221ENST00000477203 NCK2O43639 380 aa14.67□□□□□ -0.06
HDAC7-221ENST00000477203 CALUO43852 315 aaPredicted RBP14.67□□□□□ -0.06
HDAC7-221ENST00000477203 MATR3P43243 847 aaKnown RBP eCLIP14.67□□□□□ -0.06
HDAC7-221ENST00000477203 NOP2P46087 812 aaKnown RBP14.67□□□□□ -0.06
HDAC7-221ENST00000477203 RNASE9P60153 205 aaKnown RBP14.67□□□□□ -0.06
HDAC7-221ENST00000477203 SETQ01105 290 aaPredicted RBP14.67□□□□□ -0.06
HDAC7-221ENST00000477203 SEPT14Q6ZU15 432 aa14.67□□□□□ -0.06
HDAC7-221ENST00000477203 AJAP1Q9UKB5 411 aaPredicted RBP14.67□□□□□ -0.06
HDAC7-221ENST00000477203 SYNPO2Q9UMS6 1093 aa14.67□□□□□ -0.06
HDAC7-221ENST00000477203 TMCO5BA8MYB1 307 aa14.67□□□□□ -0.06
HDAC7-221ENST00000477203 TLR2O60603 784 aa14.67□□□□□ -0.06
HDAC7-221ENST00000477203 EPB41P11171 864 aaKnown RBP14.67□□□□□ -0.06
HDAC7-221ENST00000477203 MAGEA1P43355 309 aa14.67□□□□□ -0.06
HDAC7-221ENST00000477203 PLA2G4AP47712 749 aa14.67□□□□□ -0.06
HDAC7-221ENST00000477203 LMAN1P49257 510 aa14.67□□□□□ -0.06
HDAC7-221ENST00000477203 USP14P54578 494 aa14.67□□□□□ -0.06
HDAC7-221ENST00000477203 KIF5AQ12840 1032 aa14.67□□□□□ -0.06
HDAC7-221ENST00000477203 COBLL1Q53SF7 1204 aa14.67□□□□□ -0.06
HDAC7-221ENST00000477203 DAW1Q8N136 415 aa14.67□□□□□ -0.06
HDAC7-221ENST00000477203 PLAGL2Q9UPG8 496 aa14.67□□□□□ -0.06
HDAC7-221ENST00000477203 CAPN6Q9Y6Q1 641 aa14.67□□□□□ -0.06
HDAC7-221ENST00000477203 BRCA2P51587 3418 aa14.66□□□□□ -0.06
HDAC7-221ENST00000477203 EXOC3O60645 756 aa14.66□□□□□ -0.06
HDAC7-221ENST00000477203 YWHABP31946 246 aaKnown RBP14.66□□□□□ -0.06
HDAC7-221ENST00000477203 CHMP4BP1P59074 171 aa14.66□□□□□ -0.06
HDAC7-221ENST00000477203 EAPPQ56P03 285 aaPredicted RBP14.66□□□□□ -0.06
HDAC7-221ENST00000477203 SFMBT2Q5VUG0 894 aa14.66□□□□□ -0.06
HDAC7-221ENST00000477203 FAM186BQ8IYM0 893 aa14.66□□□□□ -0.06
HDAC7-221ENST00000477203 GOLPH3Q9H4A6 298 aa14.66□□□□□ -0.06
HDAC7-221ENST00000477203 AS3MTQ9HBK9 375 aa14.66□□□□□ -0.06
HDAC7-221ENST00000477203 EHD2Q9NZN4 543 aa14.66□□□□□ -0.06
HDAC7-221ENST00000477203 PCDHA13Q9Y5I0 950 aa14.66□□□□□ -0.06
HDAC7-221ENST00000477203 COL11A1P12107 1806 aaPredicted RBP14.66□□□□□ -0.06
HDAC7-221ENST00000477203 ZMYND10O75800 440 aa14.66□□□□□ -0.06
HDAC7-221ENST00000477203 CLSTN1O94985 981 aa14.66□□□□□ -0.06
HDAC7-221ENST00000477203 LMNB1P20700 586 aa14.66□□□□□ -0.06
HDAC7-221ENST00000477203 QARSP47897 775 aaKnown RBP14.66□□□□□ -0.06
HDAC7-221ENST00000477203 KRT83P78385 493 aa14.66□□□□□ -0.06
HDAC7-221ENST00000477203 MEA1Q16626 185 aa14.66□□□□□ -0.06
HDAC7-221ENST00000477203 PDXDC1Q6P996 788 aa14.66□□□□□ -0.06
HDAC7-221ENST00000477203 APOBEC3FQ8IUX4 373 aaKnown RBP14.66□□□□□ -0.06
HDAC7-221ENST00000477203 ANKRD35Q8N283 1001 aa14.66□□□□□ -0.06
HDAC7-221ENST00000477203 RETREG2Q8NC44 543 aa14.66□□□□□ -0.06
HDAC7-221ENST00000477203 CEP63Q96MT8 703 aa14.66□□□□□ -0.06
HDAC7-221ENST00000477203 PACSIN1Q9BY11 444 aa14.66□□□□□ -0.06
HDAC7-221ENST00000477203 TYW1Q9NV66 732 aaKnown RBP14.66□□□□□ -0.06
HDAC7-221ENST00000477203 GCNT4Q9P109 453 aa14.66□□□□□ -0.06
HDAC7-221ENST00000477203 GABBR1Q9UBS5 961 aa14.66□□□□□ -0.06
HDAC7-221ENST00000477203 SALL4Q9UJQ4 1053 aa14.66□□□□□ -0.06
HDAC7-221ENST00000477203 KRT86O43790 486 aa14.66□□□□□ -0.06
HDAC7-221ENST00000477203 P4HBP07237 508 aaKnown RBP14.66□□□□□ -0.06
HDAC7-221ENST00000477203 SEMA3FQ13275 785 aa14.66□□□□□ -0.06
HDAC7-221ENST00000477203 ARHGAP44Q17R89 818 aa14.66□□□□□ -0.06
HDAC7-221ENST00000477203 EXOC3L4Q17RC7 722 aa14.66□□□□□ -0.06
HDAC7-221ENST00000477203 PCNX4Q63HM2 1172 aa14.66□□□□□ -0.06
HDAC7-221ENST00000477203 SWSAP1Q6NVH7 229 aa14.66□□□□□ -0.06
HDAC7-221ENST00000477203 EPM2AIP1Q7L775 607 aaPredicted RBP14.66□□□□□ -0.06
HDAC7-221ENST00000477203 HS2ST1Q7LGA3 356 aa14.66□□□□□ -0.06
HDAC7-221ENST00000477203 ZNF720Q7Z2F6 126 aa14.66□□□□□ -0.06
HDAC7-221ENST00000477203 NLRX1Q86UT6 975 aa14.66□□□□□ -0.06
HDAC7-221ENST00000477203 A1CFQ9NQ94 594 aaKnown RBP14.66□□□□□ -0.06
HDAC7-221ENST00000477203 PLA2G6O60733 806 aa14.65□□□□□ -0.06
HDAC7-221ENST00000477203 AFPP02771 609 aaKnown RBP14.65□□□□□ -0.06
HDAC7-221ENST00000477203 FECHP22830 423 aa14.65□□□□□ -0.06
HDAC7-221ENST00000477203 RARRES1P49788 294 aa14.65□□□□□ -0.06
HDAC7-221ENST00000477203 KLHL30Q0D2K2 578 aa14.65□□□□□ -0.06
HDAC7-221ENST00000477203 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.65□□□□□ -0.06
HDAC7-221ENST00000477203 NCAPG2Q86XI2 1143 aa14.65□□□□□ -0.06
HDAC7-221ENST00000477203 CAGE1Q8TC20 777 aa14.65□□□□□ -0.06
HDAC7-221ENST00000477203 CBWD1Q9BRT8 395 aa14.65□□□□□ -0.06
HDAC7-221ENST00000477203 SEPT11Q9NVA2 429 aaKnown RBP14.65□□□□□ -0.06
HDAC7-221ENST00000477203 CDC23Q9UJX2 597 aa14.65□□□□□ -0.06
HDAC7-221ENST00000477203 ZNF214Q9UL59 606 aaPredicted RBP14.65□□□□□ -0.06
HDAC7-221ENST00000477203 UBIAD1Q9Y5Z9 338 aa14.65□□□□□ -0.06
HDAC7-221ENST00000477203 USP2O75604 605 aaPredicted RBP14.65□□□□□ -0.06
HDAC7-221ENST00000477203 BRD2P25440 801 aaKnown RBP14.65□□□□□ -0.06
HDAC7-221ENST00000477203 ICE2Q659A1 982 aa14.65□□□□□ -0.06
HDAC7-221ENST00000477203 CYFIP1Q7L576 1253 aa14.65□□□□□ -0.06
HDAC7-221ENST00000477203 SULF1Q8IWU6 871 aa14.65□□□□□ -0.06
HDAC7-221ENST00000477203 NOA1Q8NC60 698 aaKnown RBP14.65□□□□□ -0.06
HDAC7-221ENST00000477203 KCNG1Q9UIX4 513 aa14.65□□□□□ -0.06
HDAC7-221ENST00000477203 PACSIN2Q9UNF0 486 aaPredicted RBP14.65□□□□□ -0.06
HDAC7-221ENST00000477203 KIAA1217Q5T5P2 1943 aa14.65□□□□□ -0.06
HDAC7-221ENST00000477203 ZMYM2Q9UBW7 1377 aa14.65□□□□□ -0.07
HDAC7-221ENST00000477203 BRCA1P38398 1863 aaKnown RBP14.64□□□□□ -0.07
HDAC7-221ENST00000477203 DLG4P78352 724 aa14.64□□□□□ -0.07
HDAC7-221ENST00000477203 CCDC127Q96BQ5 260 aa14.64□□□□□ -0.07
HDAC7-221ENST00000477203 GDAP1L1Q96MZ0 367 aa14.64□□□□□ -0.07
HDAC7-221ENST00000477203 RIT2Q99578 217 aa14.64□□□□□ -0.07
HDAC7-221ENST00000477203 GBP3Q9H0R5 595 aa14.64□□□□□ -0.07
HDAC7-221ENST00000477203 HAUS4Q9H6D7 363 aa14.64□□□□□ -0.07
HDAC7-221ENST00000477203 MYO6Q9UM54 1294 aa14.64□□□□□ -0.07
HDAC7-221ENST00000477203 KIF13BQ9NQT8 1826 aa14.64□□□□□ -0.07
HDAC7-221ENST00000477203 A0A087X0T9 212 aa14.64□□□□□ -0.07
HDAC7-221ENST00000477203 PDXKO00764 312 aa14.64□□□□□ -0.07
HDAC7-221ENST00000477203 FAM228BP0C875 321 aa14.64□□□□□ -0.07
HDAC7-221ENST00000477203 RPL13P26373 211 aaKnown RBP14.64□□□□□ -0.07
HDAC7-221ENST00000477203 DSG3P32926 999 aa14.64□□□□□ -0.07
HDAC7-221ENST00000477203 TMCO3Q6UWJ1 677 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms