RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 PPP1R16BQ96T49 567 aa18.77■□□□□ 0.6
APOBEC3F-203ENST00000476513 RNF19AQ9NV58 838 aa18.77■□□□□ 0.6
APOBEC3F-203ENST00000476513 HCFC2Q9Y5Z7 792 aa18.77■□□□□ 0.6
APOBEC3F-203ENST00000476513 MYO15AQ9UKN7 3530 aa18.77■□□□□ 0.6
APOBEC3F-203ENST00000476513 GVINP1Q7Z2Y8 2422 aa18.76■□□□□ 0.59
APOBEC3F-203ENST00000476513 CCNE2O96020 404 aa18.76■□□□□ 0.59
APOBEC3F-203ENST00000476513 ASGR2P07307 311 aa18.76■□□□□ 0.59
APOBEC3F-203ENST00000476513 PPM1AP35813 382 aa18.76■□□□□ 0.59
APOBEC3F-203ENST00000476513 CRYBB1P53674 252 aaPredicted RBP18.76■□□□□ 0.59
APOBEC3F-203ENST00000476513 ERMP1Q7Z2K6 904 aa18.76■□□□□ 0.59
APOBEC3F-203ENST00000476513 MRPL43Q8N983 215 aaKnown RBP18.76■□□□□ 0.59
APOBEC3F-203ENST00000476513 NKD2Q969F2 451 aaPredicted RBP18.76■□□□□ 0.59
APOBEC3F-203ENST00000476513 OSMRQ99650 979 aa18.76■□□□□ 0.59
APOBEC3F-203ENST00000476513 AGO4Q9HCK5 861 aaKnown RBP18.76■□□□□ 0.59
APOBEC3F-203ENST00000476513 SPG21Q9NZD8 308 aa18.76■□□□□ 0.59
APOBEC3F-203ENST00000476513 COL1A2P08123 1366 aa18.76■□□□□ 0.59
APOBEC3F-203ENST00000476513 C2orf71A6NGG8 1288 aa18.75■□□□□ 0.59
APOBEC3F-203ENST00000476513 ZBTB42B2RXF5 422 aa18.75■□□□□ 0.59
APOBEC3F-203ENST00000476513 BACH1O14867 736 aa18.75■□□□□ 0.59
APOBEC3F-203ENST00000476513 CLASP2O75122 1294 aaKnown RBP18.75■□□□□ 0.59
APOBEC3F-203ENST00000476513 WEE2P0C1S8 567 aa18.75■□□□□ 0.59
APOBEC3F-203ENST00000476513 RXRAP19793 462 aa18.75■□□□□ 0.59
APOBEC3F-203ENST00000476513 AAMPQ13685 434 aa18.75■□□□□ 0.59
APOBEC3F-203ENST00000476513 ABHD15Q6UXT9 468 aa18.75■□□□□ 0.59
APOBEC3F-203ENST00000476513 HEATR3Q7Z4Q2 680 aa18.75■□□□□ 0.59
APOBEC3F-203ENST00000476513 LRRC43Q8N309 656 aa18.75■□□□□ 0.59
APOBEC3F-203ENST00000476513 HOXA2O43364 376 aa18.74■□□□□ 0.59
APOBEC3F-203ENST00000476513 GPR32O75388 356 aa18.74■□□□□ 0.59
APOBEC3F-203ENST00000476513 GSPT1P15170 499 aaKnown RBP18.74■□□□□ 0.59
APOBEC3F-203ENST00000476513 MTHFRP42898 656 aa18.74■□□□□ 0.59
APOBEC3F-203ENST00000476513 ID4P47928 161 aa18.74■□□□□ 0.59
APOBEC3F-203ENST00000476513 CLCN5P51795 746 aa18.74■□□□□ 0.59
APOBEC3F-203ENST00000476513 SMC1AQ14683 1233 aaKnown RBP18.74■□□□□ 0.59
APOBEC3F-203ENST00000476513 CEP55Q53EZ4 464 aa18.74■□□□□ 0.59
APOBEC3F-203ENST00000476513 ZNF484Q5JVG2 852 aa18.74■□□□□ 0.59
APOBEC3F-203ENST00000476513 FAM160B1Q5W0V3 765 aa18.74■□□□□ 0.59
APOBEC3F-203ENST00000476513 MCTP2Q6DN12 878 aa18.74■□□□□ 0.59
APOBEC3F-203ENST00000476513 NFXL1Q6ZNB6 911 aa18.74■□□□□ 0.59
APOBEC3F-203ENST00000476513 CCDC60Q8IWA6 550 aaPredicted RBP18.74■□□□□ 0.59
APOBEC3F-203ENST00000476513 ZDHHC14Q8IZN3 488 aa18.74■□□□□ 0.59
APOBEC3F-203ENST00000476513 ADSSL1Q8N142 457 aa18.74■□□□□ 0.59
APOBEC3F-203ENST00000476513 CCDC82Q8N4S0 544 aa18.74■□□□□ 0.59
APOBEC3F-203ENST00000476513 RUFY2Q8WXA3 655 aa18.74■□□□□ 0.59
APOBEC3F-203ENST00000476513 PGBD1Q96JS3 809 aa18.74■□□□□ 0.59
APOBEC3F-203ENST00000476513 MFSD1Q9H3U5 465 aa18.74■□□□□ 0.59
APOBEC3F-203ENST00000476513 LIMD1Q9UGP4 676 aa18.74■□□□□ 0.59
APOBEC3F-203ENST00000476513 DDX39AO00148 427 aaKnown RBP18.73■□□□□ 0.59
APOBEC3F-203ENST00000476513 MEIS1O00470 390 aa18.73■□□□□ 0.59
APOBEC3F-203ENST00000476513 PRC1O43663 620 aa18.73■□□□□ 0.59
APOBEC3F-203ENST00000476513 C22orf31O95567 290 aa18.73■□□□□ 0.59
APOBEC3F-203ENST00000476513 VTNP04004 478 aa18.73■□□□□ 0.59
APOBEC3F-203ENST00000476513 CHMLP26374 656 aa18.73■□□□□ 0.59
APOBEC3F-203ENST00000476513 RARS2Q5T160 578 aaKnown RBP18.73■□□□□ 0.59
APOBEC3F-203ENST00000476513 PDXDC2PQ6P474 469 aa18.73■□□□□ 0.59
APOBEC3F-203ENST00000476513 CASC1Q6TDU7 716 aa18.73■□□□□ 0.59
APOBEC3F-203ENST00000476513 RAB11FIP4Q86YS3 637 aa18.73■□□□□ 0.59
APOBEC3F-203ENST00000476513 ABI1Q8IZP0 508 aa18.73■□□□□ 0.59
APOBEC3F-203ENST00000476513 SLC39A11Q8N1S5 342 aa18.73■□□□□ 0.59
APOBEC3F-203ENST00000476513 C12orf76Q8N812 135 aaPredicted RBP18.73■□□□□ 0.59
APOBEC3F-203ENST00000476513 TDRD5Q8NAT2 981 aaKnown RBP18.73■□□□□ 0.59
APOBEC3F-203ENST00000476513 MTA3Q9BTC8 594 aa18.73■□□□□ 0.59
APOBEC3F-203ENST00000476513 ZNF302Q9NR11 478 aa18.73■□□□□ 0.59
APOBEC3F-203ENST00000476513 MYO10Q9HD67 2058 aa18.73■□□□□ 0.59
APOBEC3F-203ENST00000476513 CCDC69A6NI79 296 aa18.72■□□□□ 0.59
APOBEC3F-203ENST00000476513 SH2B2O14492 632 aaPredicted RBP18.72■□□□□ 0.59
APOBEC3F-203ENST00000476513 ATP4AP20648 1035 aa18.72■□□□□ 0.59
APOBEC3F-203ENST00000476513 TMTC2Q8N394 836 aa18.72■□□□□ 0.59
APOBEC3F-203ENST00000476513 CALM1P0DP23 149 aa18.71■□□□□ 0.59
APOBEC3F-203ENST00000476513 CALM2P0DP24 149 aa18.71■□□□□ 0.59
APOBEC3F-203ENST00000476513 CALM3P0DP25 149 aa18.71■□□□□ 0.59
APOBEC3F-203ENST00000476513 COL9A3Q14050 684 aaPredicted RBP18.71■□□□□ 0.59
APOBEC3F-203ENST00000476513 CLLU1OSQ5K130 101 aa18.71■□□□□ 0.59
APOBEC3F-203ENST00000476513 TTC22Q5TAA0 569 aa18.71■□□□□ 0.59
APOBEC3F-203ENST00000476513 CWF19L1Q69YN2 538 aaKnown RBP18.71■□□□□ 0.59
APOBEC3F-203ENST00000476513 WWC2Q6AWC2 1192 aa18.71■□□□□ 0.59
APOBEC3F-203ENST00000476513 KIAA1841Q6NSI8 718 aa18.71■□□□□ 0.59
APOBEC3F-203ENST00000476513 SWSAP1Q6NVH7 229 aa18.71■□□□□ 0.59
APOBEC3F-203ENST00000476513 KANK3Q6NY19 840 aa18.71■□□□□ 0.59
APOBEC3F-203ENST00000476513 TMTC3Q6ZXV5 915 aa18.71■□□□□ 0.59
APOBEC3F-203ENST00000476513 ECHDC2Q86YB7 292 aa18.71■□□□□ 0.59
APOBEC3F-203ENST00000476513 METTL13Q8N6R0 699 aa18.71■□□□□ 0.59
APOBEC3F-203ENST00000476513 FLCNQ8NFG4 579 aa18.71■□□□□ 0.59
APOBEC3F-203ENST00000476513 FOSP01100 380 aaPredicted RBP18.7■□□□□ 0.58
APOBEC3F-203ENST00000476513 CA8P35219 290 aa18.7■□□□□ 0.58
APOBEC3F-203ENST00000476513 ATAT1Q5SQI0 421 aa18.7■□□□□ 0.58
APOBEC3F-203ENST00000476513 TYW1BQ6NUM6 668 aa18.7■□□□□ 0.58
APOBEC3F-203ENST00000476513 MIS18BP1Q6P0N0 1132 aa18.7■□□□□ 0.58
APOBEC3F-203ENST00000476513 PLCD3Q8N3E9 789 aa18.7■□□□□ 0.58
APOBEC3F-203ENST00000476513 RNF169Q8NCN4 708 aa18.7■□□□□ 0.58
APOBEC3F-203ENST00000476513 MAP4K1Q92918 833 aa18.7■□□□□ 0.58
APOBEC3F-203ENST00000476513 ANO3Q9BYT9 981 aa18.7■□□□□ 0.58
APOBEC3F-203ENST00000476513 RIC8AQ9NPQ8 531 aa18.7■□□□□ 0.58
APOBEC3F-203ENST00000476513 DBR1Q9UK59 544 aaKnown RBP18.7■□□□□ 0.58
APOBEC3F-203ENST00000476513 USTQ9Y2C2 406 aa18.7■□□□□ 0.58
APOBEC3F-203ENST00000476513 CACNA1AO00555 2505 aa18.69■□□□□ 0.58
APOBEC3F-203ENST00000476513 DHX15O43143 795 aaKnown RBP18.69■□□□□ 0.58
APOBEC3F-203ENST00000476513 SGSM2O43147 1006 aa18.69■□□□□ 0.58
APOBEC3F-203ENST00000476513 PI15O43692 258 aa18.69■□□□□ 0.58
APOBEC3F-203ENST00000476513 CXCL14O95715 111 aa18.69■□□□□ 0.58
APOBEC3F-203ENST00000476513 ZSCAN20P17040 1043 aaPredicted RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms