RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 ADAM22Q9P0K1 906 aa11.75□□□□□ -0.53
VAPB-204ENST00000475243 NLRP1Q9C000 1473 aa11.75□□□□□ -0.53
VAPB-204ENST00000475243 DENND3A2RUS2 1198 aa11.75□□□□□ -0.53
VAPB-204ENST00000475243 GNL1P36915 607 aaPredicted RBP11.75□□□□□ -0.53
VAPB-204ENST00000475243 RNF219Q5W0B1 726 aaPredicted RBP11.75□□□□□ -0.53
VAPB-204ENST00000475243 SLFN12LQ6IEE8 588 aa11.75□□□□□ -0.53
VAPB-204ENST00000475243 CEP95Q96GE4 821 aa11.75□□□□□ -0.53
VAPB-204ENST00000475243 STRBPQ96SI9 672 aaKnown RBP11.75□□□□□ -0.53
VAPB-204ENST00000475243 GFPT1Q06210 699 aaPredicted RBP11.75□□□□□ -0.53
VAPB-204ENST00000475243 DRP2Q13474 957 aa11.75□□□□□ -0.53
VAPB-204ENST00000475243 TBC1D9BQ66K14 1250 aa11.75□□□□□ -0.53
VAPB-204ENST00000475243 FOXP4Q8IVH2 680 aaPredicted RBP11.75□□□□□ -0.53
VAPB-204ENST00000475243 MMTAG2Q9BU76 263 aaKnown RBP11.75□□□□□ -0.53
VAPB-204ENST00000475243 SUGT1Q9Y2Z0 365 aa11.75□□□□□ -0.53
VAPB-204ENST00000475243 RNF123Q5XPI4 1314 aa11.75□□□□□ -0.53
VAPB-204ENST00000475243 MAPK6Q16659 721 aa11.75□□□□□ -0.53
VAPB-204ENST00000475243 CCHCR1Q8TD31 782 aa11.75□□□□□ -0.53
VAPB-204ENST00000475243 SLC13A4Q9UKG4 626 aa11.75□□□□□ -0.53
VAPB-204ENST00000475243 MINPP1Q9UNW1 487 aa11.75□□□□□ -0.53
VAPB-204ENST00000475243 SYNMO15061 1565 aa11.75□□□□□ -0.53
VAPB-204ENST00000475243 DISP1Q96F81 1524 aa11.75□□□□□ -0.53
VAPB-204ENST00000475243 ESRRAP11474 423 aaPredicted RBP11.75□□□□□ -0.53
VAPB-204ENST00000475243 RWDD2BP57060 319 aa11.75□□□□□ -0.53
VAPB-204ENST00000475243 STXBP2Q15833 593 aa11.75□□□□□ -0.53
VAPB-204ENST00000475243 SNRNP48Q6IEG0 339 aaKnown RBP11.75□□□□□ -0.53
VAPB-204ENST00000475243 PDIK1LQ8N165 341 aa11.75□□□□□ -0.53
VAPB-204ENST00000475243 SFMBT1Q9UHJ3 866 aa11.75□□□□□ -0.53
VAPB-204ENST00000475243 USP17L10C9JJH3 530 aa11.75□□□□□ -0.53
VAPB-204ENST00000475243 NME3Q13232 169 aa11.75□□□□□ -0.53
VAPB-204ENST00000475243 KDM5DQ9BY66 1539 aa11.75□□□□□ -0.53
VAPB-204ENST00000475243 ARHGEF37A1IGU5 675 aa11.74□□□□□ -0.53
VAPB-204ENST00000475243 hCG_1984214I3L0E3 225 aa11.74□□□□□ -0.53
VAPB-204ENST00000475243 ZBTB7AO95365 584 aa11.74□□□□□ -0.53
VAPB-204ENST00000475243 NECTIN1Q15223 517 aa11.74□□□□□ -0.53
VAPB-204ENST00000475243 ZNF713Q8N859 430 aaPredicted RBP11.74□□□□□ -0.53
VAPB-204ENST00000475243 STAT3P40763 770 aa11.74□□□□□ -0.53
VAPB-204ENST00000475243 RESP18Q5W5W9 173 aa11.74□□□□□ -0.53
VAPB-204ENST00000475243 TOGARAM2Q6ZUX3 1019 aa11.74□□□□□ -0.53
VAPB-204ENST00000475243 IFT43Q96FT9 208 aa11.74□□□□□ -0.53
VAPB-204ENST00000475243 DYDC2Q96IM9 177 aa11.74□□□□□ -0.53
VAPB-204ENST00000475243 TRIM4Q9C037 500 aa11.74□□□□□ -0.53
VAPB-204ENST00000475243 CNOT8Q9UFF9 292 aaKnown RBP11.74□□□□□ -0.53
VAPB-204ENST00000475243 PCSK1NQ9UHG2 260 aa11.74□□□□□ -0.53
VAPB-204ENST00000475243 USP6P35125 1406 aa11.74□□□□□ -0.53
VAPB-204ENST00000475243 PRCPP42785 496 aa11.74□□□□□ -0.53
VAPB-204ENST00000475243 NOP14P78316 857 aaKnown RBP11.74□□□□□ -0.53
VAPB-204ENST00000475243 SMYD3Q9H7B4 428 aa11.74□□□□□ -0.53
VAPB-204ENST00000475243 MLXIPLQ9NP71 852 aa11.74□□□□□ -0.53
VAPB-204ENST00000475243 IQANK1A0A1B0GTG1 560 aa11.74□□□□□ -0.53
VAPB-204ENST00000475243 KPNA2P52292 529 aaKnown RBP11.74□□□□□ -0.53
VAPB-204ENST00000475243 GYS2P54840 703 aa11.74□□□□□ -0.53
VAPB-204ENST00000475243 SWSAP1Q6NVH7 229 aa11.74□□□□□ -0.53
VAPB-204ENST00000475243 EFHD1Q9BUP0 239 aa11.74□□□□□ -0.53
VAPB-204ENST00000475243 H3BRJ5 948 aa11.74□□□□□ -0.53
VAPB-204ENST00000475243 ECE2O60344 883 aa11.74□□□□□ -0.53
VAPB-204ENST00000475243 LIFRP42702 1097 aa11.74□□□□□ -0.53
VAPB-204ENST00000475243 CAPRIN1Q14444 709 aaKnown RBP11.74□□□□□ -0.53
VAPB-204ENST00000475243 SFR1Q86XK3 245 aa11.74□□□□□ -0.53
VAPB-204ENST00000475243 RNF135Q8IUD6 432 aa11.74□□□□□ -0.53
VAPB-204ENST00000475243 TRIM59Q8IWR1 403 aa11.74□□□□□ -0.53
VAPB-204ENST00000475243 NEK9Q8TD19 979 aa11.74□□□□□ -0.53
VAPB-204ENST00000475243 PIM2Q9P1W9 311 aa11.74□□□□□ -0.53
VAPB-204ENST00000475243 POTEB3A0JP26 581 aa11.74□□□□□ -0.53
VAPB-204ENST00000475243 POTECB2RU33 542 aa11.74□□□□□ -0.53
VAPB-204ENST00000475243 NEMP1O14524 444 aa11.74□□□□□ -0.53
VAPB-204ENST00000475243 ZBTB5O15062 677 aa11.74□□□□□ -0.53
VAPB-204ENST00000475243 NR1D1P20393 614 aa11.74□□□□□ -0.53
VAPB-204ENST00000475243 NUGGCQ68CJ6 796 aa11.74□□□□□ -0.53
VAPB-204ENST00000475243 POTEBQ6S5H4 581 aa11.74□□□□□ -0.53
VAPB-204ENST00000475243 PANX2Q96RD6 677 aa11.74□□□□□ -0.53
VAPB-204ENST00000475243 TMEM47Q9BQJ4 181 aa11.74□□□□□ -0.53
VAPB-204ENST00000475243 ERBB3P21860 1342 aa11.74□□□□□ -0.53
VAPB-204ENST00000475243 A0A0G2JND7 137 aa11.73□□□□□ -0.53
VAPB-204ENST00000475243 POTEFA5A3E0 1075 aa11.73□□□□□ -0.53
VAPB-204ENST00000475243 PIK3R2O00459 728 aa11.73□□□□□ -0.53
VAPB-204ENST00000475243 POTEIP0CG38 1075 aa11.73□□□□□ -0.53
VAPB-204ENST00000475243 PAMP19021 973 aa11.73□□□□□ -0.53
VAPB-204ENST00000475243 ZNF746Q6NUN9 644 aaPredicted RBP11.73□□□□□ -0.53
VAPB-204ENST00000475243 POTEGQ6S5H5 508 aa11.73□□□□□ -0.53
VAPB-204ENST00000475243 POTEEQ6S8J3 1075 aa11.73□□□□□ -0.53
VAPB-204ENST00000475243 TBC1D10CQ8IV04 446 aa11.73□□□□□ -0.53
VAPB-204ENST00000475243 TRAIPQ9BWF2 469 aa11.73□□□□□ -0.53
VAPB-204ENST00000475243 PRELPP51888 382 aa11.73□□□□□ -0.53
VAPB-204ENST00000475243 KCNA1Q09470 495 aa11.73□□□□□ -0.53
VAPB-204ENST00000475243 CRLF3Q8IUI8 442 aa11.73□□□□□ -0.53
VAPB-204ENST00000475243 C2orf69Q8N8R5 385 aa11.73□□□□□ -0.53
VAPB-204ENST00000475243 SNX19Q92543 992 aa11.73□□□□□ -0.53
VAPB-204ENST00000475243 ATP6V0A4Q9HBG4 840 aa11.73□□□□□ -0.53
VAPB-204ENST00000475243 ABCB6Q9NP58 842 aa11.73□□□□□ -0.53
VAPB-204ENST00000475243 FAM8A1Q9UBU6 413 aa11.73□□□□□ -0.53
VAPB-204ENST00000475243 E9PMD0 336 aa11.73□□□□□ -0.53
VAPB-204ENST00000475243 HSPA4LO95757 839 aa11.73□□□□□ -0.53
VAPB-204ENST00000475243 ATG16L1Q676U5 607 aa11.73□□□□□ -0.53
VAPB-204ENST00000475243 OXER1Q8TDS5 423 aa11.73□□□□□ -0.53
VAPB-204ENST00000475243 ELAC2Q9BQ52 826 aaKnown RBP11.73□□□□□ -0.53
VAPB-204ENST00000475243 HPCAL4Q9UM19 191 aa11.73□□□□□ -0.53
VAPB-204ENST00000475243 TTI1O43156 1089 aa11.73□□□□□ -0.53
VAPB-204ENST00000475243 CHEK2O96017 543 aa11.73□□□□□ -0.53
VAPB-204ENST00000475243 LDHAP00338 332 aaKnown RBP11.73□□□□□ -0.53
VAPB-204ENST00000475243 ACCSLQ4AC99 568 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms