RNA–Protein interactions for RNA: ENST00000474961.5

DDX39B-217, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 974 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-217ENST00000474961 XRCC6P12956 609 aaKnown RBP eCLIP10.61□□□□□ -0.71
DDX39B-217ENST00000474961 HOXD8P13378 290 aaPredicted RBP10.61□□□□□ -0.71
DDX39B-217ENST00000474961 ATP4AP20648 1035 aa10.61□□□□□ -0.71
DDX39B-217ENST00000474961 CLCN1P35523 988 aa10.61□□□□□ -0.71
DDX39B-217ENST00000474961 STAT5BP51692 787 aa10.61□□□□□ -0.71
DDX39B-217ENST00000474961 GJA9P57773 515 aa10.61□□□□□ -0.71
DDX39B-217ENST00000474961 MDM2Q00987 491 aaPredicted RBP10.61□□□□□ -0.71
DDX39B-217ENST00000474961 BEX3Q00994 111 aa10.61□□□□□ -0.71
DDX39B-217ENST00000474961 PRKCEQ02156 737 aa10.61□□□□□ -0.71
DDX39B-217ENST00000474961 DHX8Q14562 1220 aaKnown RBP10.61□□□□□ -0.71
DDX39B-217ENST00000474961 DGKDQ16760 1214 aa10.61□□□□□ -0.71
DDX39B-217ENST00000474961 SLC9C1Q4G0N8 1177 aa10.61□□□□□ -0.71
DDX39B-217ENST00000474961 CCDC183Q5T5S1 534 aa10.61□□□□□ -0.71
DDX39B-217ENST00000474961 KANK3Q6NY19 840 aa10.61□□□□□ -0.71
DDX39B-217ENST00000474961 SV2BQ7L1I2 683 aa10.61□□□□□ -0.71
DDX39B-217ENST00000474961 PLPPR4Q7Z2D5 763 aa10.61□□□□□ -0.71
DDX39B-217ENST00000474961 SH3RF1Q7Z6J0 888 aa10.61□□□□□ -0.71
DDX39B-217ENST00000474961 TRIM50Q86XT4 487 aa10.61□□□□□ -0.71
DDX39B-217ENST00000474961 ELOA2Q8IYF1 753 aaPredicted RBP10.61□□□□□ -0.71
DDX39B-217ENST00000474961 GRAMD1CQ8IYS0 662 aa10.61□□□□□ -0.71
DDX39B-217ENST00000474961 LARP4BQ92615 738 aaKnown RBP10.61□□□□□ -0.71
DDX39B-217ENST00000474961 STAMQ92783 540 aa10.61□□□□□ -0.71
DDX39B-217ENST00000474961 GLG1Q92896 1179 aa10.61□□□□□ -0.71
DDX39B-217ENST00000474961 SYAP1Q96A49 352 aaPredicted RBP10.61□□□□□ -0.71
DDX39B-217ENST00000474961 PHOX2BQ99453 314 aa10.61□□□□□ -0.71
DDX39B-217ENST00000474961 MTRQ99707 1265 aa10.61□□□□□ -0.71
DDX39B-217ENST00000474961 TNMDQ9H2S6 317 aa10.61□□□□□ -0.71
DDX39B-217ENST00000474961 SMARCAD1Q9H4L7 1026 aa10.61□□□□□ -0.71
DDX39B-217ENST00000474961 AZI2Q9H6S1 392 aa10.61□□□□□ -0.71
DDX39B-217ENST00000474961 MAGEF1Q9HAY2 307 aa10.61□□□□□ -0.71
DDX39B-217ENST00000474961 ANKEF1Q9NU02 776 aa10.61□□□□□ -0.71
DDX39B-217ENST00000474961 KBTBD4Q9NVX7 518 aa10.61□□□□□ -0.71
DDX39B-217ENST00000474961 DDX20Q9UHI6 824 aaKnown RBP10.61□□□□□ -0.71
DDX39B-217ENST00000474961 EVPLQ92817 2033 aa10.61□□□□□ -0.71
DDX39B-217ENST00000474961 SYNRGQ9UMZ2 1314 aa10.6□□□□□ -0.71
DDX39B-217ENST00000474961 TRIP12Q14669 1992 aaPredicted RBP10.6□□□□□ -0.71
DDX39B-217ENST00000474961 MYADML2A6NDP7 307 aa10.6□□□□□ -0.71
DDX39B-217ENST00000474961 CTAGE5O15320 804 aa10.6□□□□□ -0.71
DDX39B-217ENST00000474961 PGK1P00558 417 aa10.6□□□□□ -0.71
DDX39B-217ENST00000474961 SSBP05455 408 aaKnown RBP eCLIP10.6□□□□□ -0.71
DDX39B-217ENST00000474961 C6orf222P0C671 652 aaPredicted RBP10.6□□□□□ -0.71
DDX39B-217ENST00000474961 ZNF286BP0CG31 522 aa10.6□□□□□ -0.71
DDX39B-217ENST00000474961 YWHABP31946 246 aaKnown RBP10.6□□□□□ -0.71
DDX39B-217ENST00000474961 CPT1AP50416 773 aa10.6□□□□□ -0.71
DDX39B-217ENST00000474961 SLC12A3P55017 1021 aa10.6□□□□□ -0.71
DDX39B-217ENST00000474961 NKX3-2P78367 333 aa10.6□□□□□ -0.71
DDX39B-217ENST00000474961 PKN2Q16513 984 aaKnown RBP10.6□□□□□ -0.71
DDX39B-217ENST00000474961 FSCN1Q16658 493 aaKnown RBP10.6□□□□□ -0.71
DDX39B-217ENST00000474961 BRDTQ58F21 947 aaPredicted RBP10.6□□□□□ -0.71
DDX39B-217ENST00000474961 XKR3Q5GH77 459 aa10.6□□□□□ -0.71
DDX39B-217ENST00000474961 FBXO46Q6PJ61 603 aaPredicted RBP10.6□□□□□ -0.71
DDX39B-217ENST00000474961 TRMT1LQ7Z2T5 733 aaKnown RBP10.6□□□□□ -0.71
DDX39B-217ENST00000474961 CKAP2LQ8IYA6 745 aa10.6□□□□□ -0.71
DDX39B-217ENST00000474961 SYT2Q8N9I0 419 aaPredicted RBP10.6□□□□□ -0.71
DDX39B-217ENST00000474961 RDH13Q8NBN7 331 aa10.6□□□□□ -0.71
DDX39B-217ENST00000474961 CCDC34Q96HJ3 373 aa10.6□□□□□ -0.71
DDX39B-217ENST00000474961 C16orf70Q9BSU1 422 aa10.6□□□□□ -0.71
DDX39B-217ENST00000474961 BHMT2Q9H2M3 363 aa10.6□□□□□ -0.71
DDX39B-217ENST00000474961 SPC25Q9HBM1 224 aa10.6□□□□□ -0.71
DDX39B-217ENST00000474961 XPNPEP3Q9NQH7 507 aa10.6□□□□□ -0.71
DDX39B-217ENST00000474961 NRBP2Q9NSY0 501 aa10.6□□□□□ -0.71
DDX39B-217ENST00000474961 DBR1Q9UK59 544 aaKnown RBP10.6□□□□□ -0.71
DDX39B-217ENST00000474961 ARHGEF35A5YM69 484 aa10.59□□□□□ -0.71
DDX39B-217ENST00000474961 TMEM150BA6NC51 233 aa10.59□□□□□ -0.71
DDX39B-217ENST00000474961 MYMKA6NI61 221 aa10.59□□□□□ -0.71
DDX39B-217ENST00000474961 MSCO60682 206 aa10.59□□□□□ -0.71
DDX39B-217ENST00000474961 ADAMTS4O75173 837 aa10.59□□□□□ -0.71
DDX39B-217ENST00000474961 MYL3P08590 195 aa10.59□□□□□ -0.71
DDX39B-217ENST00000474961 MARK3P27448 753 aa10.59□□□□□ -0.71
DDX39B-217ENST00000474961 CASP1P29466 404 aa10.59□□□□□ -0.71
DDX39B-217ENST00000474961 SLC26A2P50443 739 aa10.59□□□□□ -0.71
DDX39B-217ENST00000474961 AMPD3Q01432 767 aa10.59□□□□□ -0.71
DDX39B-217ENST00000474961 PNOCQ13519 176 aa10.59□□□□□ -0.71
DDX39B-217ENST00000474961 POSTNQ15063 836 aa10.59□□□□□ -0.71
DDX39B-217ENST00000474961 PLCB4Q15147 1175 aa10.59□□□□□ -0.71
DDX39B-217ENST00000474961 XKR9Q5GH70 373 aa10.59□□□□□ -0.71
DDX39B-217ENST00000474961 GNASQ5JWF2 1037 aa10.59□□□□□ -0.71
DDX39B-217ENST00000474961 PLA2G4FQ68DD2 849 aa10.59□□□□□ -0.71
DDX39B-217ENST00000474961 ANO5Q75V66 913 aa10.59□□□□□ -0.71
DDX39B-217ENST00000474961 OTUD6AQ7L8S5 288 aa10.59□□□□□ -0.71
DDX39B-217ENST00000474961 GPBP1Q86WP2 473 aa10.59□□□□□ -0.71
DDX39B-217ENST00000474961 KLHDC9Q8NEP7 349 aa10.59□□□□□ -0.71
DDX39B-217ENST00000474961 ATP8B4Q8TF62 1192 aa10.59□□□□□ -0.71
DDX39B-217ENST00000474961 ERCC4Q92889 916 aaPredicted RBP10.59□□□□□ -0.71
DDX39B-217ENST00000474961 FAM167AQ96KS9 214 aa10.59□□□□□ -0.71
DDX39B-217ENST00000474961 C7orf25Q9BPX7 421 aa10.59□□□□□ -0.71
DDX39B-217ENST00000474961 LRRC27Q9C0I9 530 aa10.59□□□□□ -0.71
DDX39B-217ENST00000474961 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.59□□□□□ -0.71
DDX39B-217ENST00000474961 UNC93B1Q9H1C4 597 aa10.59□□□□□ -0.71
DDX39B-217ENST00000474961 ERAP1Q9NZ08 941 aa10.59□□□□□ -0.71
DDX39B-217ENST00000474961 HOOK1Q9UJC3 728 aaKnown RBP10.59□□□□□ -0.71
DDX39B-217ENST00000474961 SCN10AQ9Y5Y9 1956 aa10.59□□□□□ -0.71
DDX39B-217ENST00000474961 H3BRB1 525 aa10.58□□□□□ -0.72
DDX39B-217ENST00000474961 ZEB2O60315 1214 aa10.58□□□□□ -0.72
DDX39B-217ENST00000474961 KPNA6O60684 536 aa10.58□□□□□ -0.72
DDX39B-217ENST00000474961 MYCP01106 439 aaPredicted RBP10.58□□□□□ -0.72
DDX39B-217ENST00000474961 CCL5P13501 91 aa10.58□□□□□ -0.72
DDX39B-217ENST00000474961 CYP11B2P19099 503 aa10.58□□□□□ -0.72
DDX39B-217ENST00000474961 RARRES1P49788 294 aa10.58□□□□□ -0.72
DDX39B-217ENST00000474961 NPEPPSP55786 919 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms