RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 SLC5A5Q92911 643 aa13.62□□□□□ -0.23
RNF220-211ENST00000474956 ZBED3Q96IU2 234 aaPredicted RBP13.62□□□□□ -0.23
RNF220-211ENST00000474956 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.62□□□□□ -0.23
RNF220-211ENST00000474956 CAPS2Q9BXY5 557 aa13.62□□□□□ -0.23
RNF220-211ENST00000474956 GANQ9H2C0 597 aa13.62□□□□□ -0.23
RNF220-211ENST00000474956 ADAMTS1Q9UHI8 967 aa13.62□□□□□ -0.23
RNF220-211ENST00000474956 ATAD5Q96QE3 1844 aa13.61□□□□□ -0.23
RNF220-211ENST00000474956 IPO5O00410 1097 aaKnown RBP13.61□□□□□ -0.23
RNF220-211ENST00000474956 TBCAO75347 108 aaKnown RBP13.61□□□□□ -0.23
RNF220-211ENST00000474956 EYA4O95677 639 aa13.61□□□□□ -0.23
RNF220-211ENST00000474956 FGFR1OPO95684 399 aaKnown RBP13.61□□□□□ -0.23
RNF220-211ENST00000474956 NR3C1P04150 777 aa13.61□□□□□ -0.23
RNF220-211ENST00000474956 MTMR2Q13614 643 aa13.61□□□□□ -0.23
RNF220-211ENST00000474956 NBPF12Q5TAG4 269 aaPredicted RBP13.61□□□□□ -0.23
RNF220-211ENST00000474956 HDAC7Q8WUI4 952 aa13.61□□□□□ -0.23
RNF220-211ENST00000474956 CLEC4DQ8WXI8 215 aa13.61□□□□□ -0.23
RNF220-211ENST00000474956 ZKSCAN4Q969J2 545 aaPredicted RBP13.61□□□□□ -0.23
RNF220-211ENST00000474956 FIZ1Q96SL8 496 aa13.61□□□□□ -0.23
RNF220-211ENST00000474956 SH3GL2Q99962 352 aa13.61□□□□□ -0.23
RNF220-211ENST00000474956 LXNQ9BS40 222 aa13.61□□□□□ -0.23
RNF220-211ENST00000474956 LRRC1Q9BTT6 524 aa13.61□□□□□ -0.23
RNF220-211ENST00000474956 DMGDHQ9UI17 866 aaKnown RBP13.61□□□□□ -0.23
RNF220-211ENST00000474956 PITPNM2Q9BZ72 1349 aa13.61□□□□□ -0.23
RNF220-211ENST00000474956 COL2A1P02458 1487 aaPredicted RBP13.61□□□□□ -0.23
RNF220-211ENST00000474956 CETN3O15182 167 aa13.61□□□□□ -0.23
RNF220-211ENST00000474956 PTGER2P43116 358 aa13.61□□□□□ -0.23
RNF220-211ENST00000474956 MAGEA1P43355 309 aa13.61□□□□□ -0.23
RNF220-211ENST00000474956 EPHB4P54760 987 aa13.61□□□□□ -0.23
RNF220-211ENST00000474956 ITGB3BPQ13352 177 aaPredicted RBP13.61□□□□□ -0.23
RNF220-211ENST00000474956 CHURC1Q8WUH1 139 aa13.61□□□□□ -0.23
RNF220-211ENST00000474956 ELMO3Q96BJ8 720 aa13.61□□□□□ -0.23
RNF220-211ENST00000474956 MS4A14Q96JA4 679 aa13.61□□□□□ -0.23
RNF220-211ENST00000474956 ALS2CR12Q96Q35 445 aa13.61□□□□□ -0.23
RNF220-211ENST00000474956 RIPK3Q9Y572 518 aa13.61□□□□□ -0.23
RNF220-211ENST00000474956 MYH11P35749 1972 aa13.61□□□□□ -0.23
RNF220-211ENST00000474956 A6NNZ2 444 aa13.61□□□□□ -0.23
RNF220-211ENST00000474956 HMGB2P26583 209 aaKnown RBP13.61□□□□□ -0.23
RNF220-211ENST00000474956 MRPS9P82933 396 aaKnown RBP13.61□□□□□ -0.23
RNF220-211ENST00000474956 TUBB8Q3ZCM7 444 aa13.61□□□□□ -0.23
RNF220-211ENST00000474956 EMBQ6PCB8 327 aa13.61□□□□□ -0.23
RNF220-211ENST00000474956 CEP63Q96MT8 703 aa13.61□□□□□ -0.23
RNF220-211ENST00000474956 POLR3CQ9BUI4 534 aaPredicted RBP13.61□□□□□ -0.23
RNF220-211ENST00000474956 HYOU1Q9Y4L1 999 aa13.61□□□□□ -0.23
RNF220-211ENST00000474956 TRIM49P0CI25 452 aa13.6□□□□□ -0.23
RNF220-211ENST00000474956 TRIM49CP0CI26 452 aa13.6□□□□□ -0.23
RNF220-211ENST00000474956 EPS15P42566 896 aa13.6□□□□□ -0.23
RNF220-211ENST00000474956 CCT5P48643 541 aa13.6□□□□□ -0.23
RNF220-211ENST00000474956 CYP2J2P51589 502 aa13.6□□□□□ -0.23
RNF220-211ENST00000474956 RNASE9P60153 205 aaKnown RBP13.6□□□□□ -0.23
RNF220-211ENST00000474956 SKIDA1Q1XH10 827 aa13.6□□□□□ -0.23
RNF220-211ENST00000474956 ALS2CLQ60I27 953 aa13.6□□□□□ -0.23
RNF220-211ENST00000474956 CIAPIN1Q6FI81 312 aa13.6□□□□□ -0.23
RNF220-211ENST00000474956 DAW1Q8N136 415 aa13.6□□□□□ -0.23
RNF220-211ENST00000474956 OSBPL9Q96SU4 736 aa13.6□□□□□ -0.23
RNF220-211ENST00000474956 KCNH7Q9NS40 1196 aa13.6□□□□□ -0.23
RNF220-211ENST00000474956 ARMCX3Q9UH62 379 aaPredicted RBP13.6□□□□□ -0.23
RNF220-211ENST00000474956 ATP9AO75110 1047 aa13.6□□□□□ -0.23
RNF220-211ENST00000474956 FAM13AO94988 1023 aa13.6□□□□□ -0.23
RNF220-211ENST00000474956 LCA5LO95447 670 aa13.6□□□□□ -0.23
RNF220-211ENST00000474956 EPB41P11171 864 aaKnown RBP13.6□□□□□ -0.23
RNF220-211ENST00000474956 GTF2A1P52655 376 aaPredicted RBP13.6□□□□□ -0.23
RNF220-211ENST00000474956 UGCGQ16739 394 aa13.6□□□□□ -0.23
RNF220-211ENST00000474956 CCDC181Q5TID7 509 aa13.6□□□□□ -0.23
RNF220-211ENST00000474956 SFMBT2Q5VUG0 894 aa13.6□□□□□ -0.23
RNF220-211ENST00000474956 TAAR1Q96RJ0 339 aa13.6□□□□□ -0.23
RNF220-211ENST00000474956 CEP72Q9P209 647 aa13.6□□□□□ -0.23
RNF220-211ENST00000474956 EIF3HO15372 352 aaKnown RBP eCLIP13.59□□□□□ -0.23
RNF220-211ENST00000474956 FTCDO95954 541 aa13.59□□□□□ -0.23
RNF220-211ENST00000474956 KLRC1P26715 233 aa13.59□□□□□ -0.23
RNF220-211ENST00000474956 PON1P27169 355 aa13.59□□□□□ -0.23
RNF220-211ENST00000474956 PAFAH1B1P43034 410 aa13.59□□□□□ -0.23
RNF220-211ENST00000474956 NAP1L1P55209 391 aaKnown RBP13.59□□□□□ -0.23
RNF220-211ENST00000474956 PPP2R5CQ13362 524 aa13.59□□□□□ -0.23
RNF220-211ENST00000474956 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.59□□□□□ -0.23
RNF220-211ENST00000474956 ZC3H3Q8IXZ2 948 aaKnown RBP13.59□□□□□ -0.23
RNF220-211ENST00000474956 BCAS4Q8TDM0 211 aa13.59□□□□□ -0.23
RNF220-211ENST00000474956 RUFY1Q96T51 708 aa13.59□□□□□ -0.23
RNF220-211ENST00000474956 GPRC5CQ9NQ84 441 aa13.59□□□□□ -0.23
RNF220-211ENST00000474956 STIM2Q9P246 746 aa13.59□□□□□ -0.23
RNF220-211ENST00000474956 TRAF3IP3Q9Y228 551 aa13.59□□□□□ -0.23
RNF220-211ENST00000474956 MRPL11Q9Y3B7 192 aaKnown RBP13.59□□□□□ -0.23
RNF220-211ENST00000474956 RGPD3A6NKT7 1758 aaPredicted RBP13.59□□□□□ -0.23
RNF220-211ENST00000474956 RGPD4Q7Z3J3 1758 aa13.59□□□□□ -0.23
RNF220-211ENST00000474956 FLOT1O75955 427 aa13.59□□□□□ -0.23
RNF220-211ENST00000474956 ASNSP08243 561 aa13.59□□□□□ -0.23
RNF220-211ENST00000474956 PTK2Q05397 1052 aa13.59□□□□□ -0.23
RNF220-211ENST00000474956 PRKG1Q13976 671 aa13.59□□□□□ -0.23
RNF220-211ENST00000474956 MICALL2Q8IY33 904 aa13.59□□□□□ -0.23
RNF220-211ENST00000474956 SLC35C1Q96A29 364 aa13.59□□□□□ -0.23
RNF220-211ENST00000474956 PIM2Q9P1W9 311 aa13.59□□□□□ -0.23
RNF220-211ENST00000474956 MYCLP12524 364 aaPredicted RBP13.59□□□□□ -0.23
RNF220-211ENST00000474956 TNFRSF8P28908 595 aa13.59□□□□□ -0.23
RNF220-211ENST00000474956 GMPSP49915 693 aaPredicted RBP13.59□□□□□ -0.23
RNF220-211ENST00000474956 SOX10P56693 466 aa13.59□□□□□ -0.23
RNF220-211ENST00000474956 SLC7A5Q01650 507 aa13.59□□□□□ -0.23
RNF220-211ENST00000474956 ZNF571Q7Z3V5 609 aaPredicted RBP13.59□□□□□ -0.23
RNF220-211ENST00000474956 MICALL1Q8N3F8 863 aa13.59□□□□□ -0.23
RNF220-211ENST00000474956 AGBL3Q8NEM8 1001 aa13.59□□□□□ -0.23
RNF220-211ENST00000474956 CAVIN3Q969G5 261 aa13.59□□□□□ -0.23
RNF220-211ENST00000474956 FAM84AQ96KN4 292 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms