RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 NBPF20Q3BBV1 942 aa11.15□□□□□ -0.62
COL8A1-206ENST00000474648 ZNF484Q5JVG2 852 aa11.15□□□□□ -0.62
COL8A1-206ENST00000474648 MARCH8Q5T0T0 291 aa11.15□□□□□ -0.62
COL8A1-206ENST00000474648 PADI6Q6TGC4 694 aa11.15□□□□□ -0.62
COL8A1-206ENST00000474648 CEP57L1Q8IYX8 460 aa11.15□□□□□ -0.62
COL8A1-206ENST00000474648 CEP170P1Q96L14 293 aa11.15□□□□□ -0.62
COL8A1-206ENST00000474648 C7orf25Q9BPX7 421 aa11.15□□□□□ -0.62
COL8A1-206ENST00000474648 RUSC1Q9BVN2 902 aa11.15□□□□□ -0.62
COL8A1-206ENST00000474648 TNMDQ9H2S6 317 aa11.15□□□□□ -0.62
COL8A1-206ENST00000474648 CLSTN2Q9H4D0 955 aa11.15□□□□□ -0.62
COL8A1-206ENST00000474648 MAGEF1Q9HAY2 307 aa11.15□□□□□ -0.62
COL8A1-206ENST00000474648 SEPT9Q9UHD8 586 aaPredicted RBP11.15□□□□□ -0.62
COL8A1-206ENST00000474648 ZNF215Q9UL58 517 aaPredicted RBP11.15□□□□□ -0.62
COL8A1-206ENST00000474648 IGKV6-21A0A0C4DH24 114 aa11.14□□□□□ -0.63
COL8A1-206ENST00000474648 NPHP3-ACAD11A0A0J9YXS1 232 aa11.14□□□□□ -0.63
COL8A1-206ENST00000474648 ARHGEF35A5YM69 484 aa11.14□□□□□ -0.63
COL8A1-206ENST00000474648 SSBP05455 408 aaKnown RBP eCLIP11.14□□□□□ -0.63
COL8A1-206ENST00000474648 SMIM10L2AP0DMW4 78 aa11.14□□□□□ -0.63
COL8A1-206ENST00000474648 SMIM10L2BP0DMW5 78 aa11.14□□□□□ -0.63
COL8A1-206ENST00000474648 HOXC8P31273 242 aa11.14□□□□□ -0.63
COL8A1-206ENST00000474648 ADAM17P78536 824 aa11.14□□□□□ -0.63
COL8A1-206ENST00000474648 CUL4BQ13620 913 aa11.14□□□□□ -0.63
COL8A1-206ENST00000474648 GIT2Q14161 759 aa11.14□□□□□ -0.63
COL8A1-206ENST00000474648 CAMK4Q16566 473 aa11.14□□□□□ -0.63
COL8A1-206ENST00000474648 SKOR2Q2VWA4 1001 aaPredicted RBP11.14□□□□□ -0.63
COL8A1-206ENST00000474648 MTERF2Q49AM1 385 aa11.14□□□□□ -0.63
COL8A1-206ENST00000474648 KANK3Q6NY19 840 aa11.14□□□□□ -0.63
COL8A1-206ENST00000474648 CNNM4Q6P4Q7 775 aa11.14□□□□□ -0.63
COL8A1-206ENST00000474648 GPBP1Q86WP2 473 aa11.14□□□□□ -0.63
COL8A1-206ENST00000474648 SLC43A3Q8NBI5 491 aa11.14□□□□□ -0.63
COL8A1-206ENST00000474648 TRAPPC12Q8WVT3 735 aa11.14□□□□□ -0.63
COL8A1-206ENST00000474648 DNAJC19Q96DA6 116 aa11.14□□□□□ -0.63
COL8A1-206ENST00000474648 ZBTB10Q96DT7 871 aa11.14□□□□□ -0.63
COL8A1-206ENST00000474648 KATNAL1Q9BW62 490 aa11.14□□□□□ -0.63
COL8A1-206ENST00000474648 DHX33Q9H6R0 707 aaKnown RBP11.14□□□□□ -0.63
COL8A1-206ENST00000474648 POLD4Q9HCU8 107 aa11.14□□□□□ -0.63
COL8A1-206ENST00000474648 XPNPEP1Q9NQW7 623 aa11.14□□□□□ -0.63
COL8A1-206ENST00000474648 SETD4Q9NVD3 440 aa11.14□□□□□ -0.63
COL8A1-206ENST00000474648 TMEM63CQ9P1W3 806 aa11.14□□□□□ -0.63
COL8A1-206ENST00000474648 HDAC6Q9UBN7 1215 aa11.14□□□□□ -0.63
COL8A1-206ENST00000474648 PPME1Q9Y570 386 aa11.14□□□□□ -0.63
COL8A1-206ENST00000474648 A0A1W2PQ45 241 aaPredicted RBP11.13□□□□□ -0.63
COL8A1-206ENST00000474648 A0A1W2PQY0 241 aa11.13□□□□□ -0.63
COL8A1-206ENST00000474648 GTPBP6O43824 516 aaPredicted RBP11.13□□□□□ -0.63
COL8A1-206ENST00000474648 KLRC4O43908 158 aa11.13□□□□□ -0.63
COL8A1-206ENST00000474648 MAFO75444 373 aaPredicted RBP11.13□□□□□ -0.63
COL8A1-206ENST00000474648 C22orf31O95567 290 aa11.13□□□□□ -0.63
COL8A1-206ENST00000474648 COL6A1P12109 1028 aa11.13□□□□□ -0.63
COL8A1-206ENST00000474648 GUCY2CP25092 1073 aa11.13□□□□□ -0.63
COL8A1-206ENST00000474648 KLRC1P26715 233 aa11.13□□□□□ -0.63
COL8A1-206ENST00000474648 SARSP49591 514 aaKnown RBP11.13□□□□□ -0.63
COL8A1-206ENST00000474648 CDK7P50613 346 aa11.13□□□□□ -0.63
COL8A1-206ENST00000474648 CHMP4BP1P59074 171 aa11.13□□□□□ -0.63
COL8A1-206ENST00000474648 ZNF200P98182 395 aaPredicted RBP11.13□□□□□ -0.63
COL8A1-206ENST00000474648 DPYDQ12882 1025 aa11.13□□□□□ -0.63
COL8A1-206ENST00000474648 PPFIA1Q13136 1202 aa11.13□□□□□ -0.63
COL8A1-206ENST00000474648 PNOCQ13519 176 aa11.13□□□□□ -0.63
COL8A1-206ENST00000474648 GRIK4Q16099 956 aa11.13□□□□□ -0.63
COL8A1-206ENST00000474648 COL13A1Q5TAT6 717 aaPredicted RBP11.13□□□□□ -0.63
COL8A1-206ENST00000474648 SESTD1Q86VW0 696 aa11.13□□□□□ -0.63
COL8A1-206ENST00000474648 DAW1Q8N136 415 aa11.13□□□□□ -0.63
COL8A1-206ENST00000474648 LINC01465Q8N7H1 131 aa11.13□□□□□ -0.63
COL8A1-206ENST00000474648 SPATA20Q8TB22 786 aa11.13□□□□□ -0.63
COL8A1-206ENST00000474648 DDX12PQ92771 950 aa11.13□□□□□ -0.63
COL8A1-206ENST00000474648 ERCC4Q92889 916 aaPredicted RBP11.13□□□□□ -0.63
COL8A1-206ENST00000474648 TRIM9Q9C026 710 aa11.13□□□□□ -0.63
COL8A1-206ENST00000474648 BLZF1Q9H2G9 400 aa11.13□□□□□ -0.63
COL8A1-206ENST00000474648 BOLA1Q9Y3E2 137 aa11.13□□□□□ -0.63
COL8A1-206ENST00000474648 CENPFP49454 3210 aa11.13□□□□□ -0.63
COL8A1-206ENST00000474648 COL1A2P08123 1366 aa11.13□□□□□ -0.63
COL8A1-206ENST00000474648 NRCAMQ92823 1304 aa11.12□□□□□ -0.63
COL8A1-206ENST00000474648 MBLAC1A4D2B0 266 aaPredicted RBP11.12□□□□□ -0.63
COL8A1-206ENST00000474648 RRN3P2A6NIE6 340 aa11.12□□□□□ -0.63
COL8A1-206ENST00000474648 KBTBD13C9JR72 458 aa11.12□□□□□ -0.63
COL8A1-206ENST00000474648 USO1O60763 962 aaKnown RBP11.12□□□□□ -0.63
COL8A1-206ENST00000474648 DGAT1O75907 488 aa11.12□□□□□ -0.63
COL8A1-206ENST00000474648 MYL1P05976 194 aa11.12□□□□□ -0.63
COL8A1-206ENST00000474648 CAPN2P17655 700 aa11.12□□□□□ -0.63
COL8A1-206ENST00000474648 RFC5P40937 340 aa11.12□□□□□ -0.63
COL8A1-206ENST00000474648 SOX10P56693 466 aa11.12□□□□□ -0.63
COL8A1-206ENST00000474648 IGBP1P78318 339 aa11.12□□□□□ -0.63
COL8A1-206ENST00000474648 AMPD3Q01432 767 aa11.12□□□□□ -0.63
COL8A1-206ENST00000474648 MAPK7Q13164 816 aa11.12□□□□□ -0.63
COL8A1-206ENST00000474648 ITGA7Q13683 1181 aa11.12□□□□□ -0.63
COL8A1-206ENST00000474648 POSTNQ15063 836 aa11.12□□□□□ -0.63
COL8A1-206ENST00000474648 GDF6Q6KF10 455 aaPredicted RBP11.12□□□□□ -0.63
COL8A1-206ENST00000474648 CAVIN1Q6NZI2 390 aaKnown RBP11.12□□□□□ -0.63
COL8A1-206ENST00000474648 NFRKBQ6P4R8 1299 aa11.12□□□□□ -0.63
COL8A1-206ENST00000474648 MTHFD1LQ6UB35 978 aa11.12□□□□□ -0.63
COL8A1-206ENST00000474648 RBM43Q6ZSC3 357 aaKnown RBP11.12□□□□□ -0.63
COL8A1-206ENST00000474648 DYMQ7RTS9 669 aa11.12□□□□□ -0.63
COL8A1-206ENST00000474648 C7orf31Q8N865 590 aa11.12□□□□□ -0.63
COL8A1-206ENST00000474648 ANKLE1Q8NAG6 615 aa11.12□□□□□ -0.63
COL8A1-206ENST00000474648 LMBR1Q8WVP7 490 aa11.12□□□□□ -0.63
COL8A1-206ENST00000474648 VTI1AQ96AJ9 217 aa11.12□□□□□ -0.63
COL8A1-206ENST00000474648 GLT1D1Q96MS3 346 aa11.12□□□□□ -0.63
COL8A1-206ENST00000474648 CTAGE1Q96RT6 745 aa11.12□□□□□ -0.63
COL8A1-206ENST00000474648 LRRC27Q9C0I9 530 aa11.12□□□□□ -0.63
COL8A1-206ENST00000474648 KCND2Q9NZV8 630 aa11.12□□□□□ -0.63
COL8A1-206ENST00000474648 PCDHA5Q9Y5H7 936 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms