RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 C2CD4DB7Z1M9 353 aa22.97■■□□□ 1.27
APP-215ENST00000474136 ATG7O95352 703 aa22.97■■□□□ 1.27
APP-215ENST00000474136 HSPA4P34932 840 aa22.97■■□□□ 1.27
APP-215ENST00000474136 PLCB3Q01970 1234 aa22.97■■□□□ 1.27
APP-215ENST00000474136 NFXL1Q6ZNB6 911 aa22.97■■□□□ 1.27
APP-215ENST00000474136 FAM228AQ86W67 206 aa22.97■■□□□ 1.27
APP-215ENST00000474136 OSMRQ99650 979 aa22.97■■□□□ 1.27
APP-215ENST00000474136 POMKQ9H5K3 350 aa22.97■■□□□ 1.27
APP-215ENST00000474136 AGO4Q9HCK5 861 aaKnown RBP22.97■■□□□ 1.27
APP-215ENST00000474136 TMEM161AQ9NX61 479 aa22.97■■□□□ 1.27
APP-215ENST00000474136 PUF60Q9UHX1 559 aaKnown RBP22.97■■□□□ 1.27
APP-215ENST00000474136 RBM8AQ9Y5S9 174 aaKnown RBP22.97■■□□□ 1.27
APP-215ENST00000474136 DMDP11532 3685 aa22.96■■□□□ 1.27
APP-215ENST00000474136 DDX39AO00148 427 aaKnown RBP22.96■■□□□ 1.27
APP-215ENST00000474136 GPR182O15218 404 aa22.96■■□□□ 1.27
APP-215ENST00000474136 PRC1O43663 620 aa22.96■■□□□ 1.27
APP-215ENST00000474136 HBP1O60381 514 aa22.96■■□□□ 1.27
APP-215ENST00000474136 CCNE2O96020 404 aa22.96■■□□□ 1.27
APP-215ENST00000474136 NUBP1P53384 320 aa22.96■■□□□ 1.27
APP-215ENST00000474136 FAM189BP81408 668 aa22.96■■□□□ 1.27
APP-215ENST00000474136 NECTIN1Q15223 517 aa22.96■■□□□ 1.27
APP-215ENST00000474136 KIZQ2M2Z5 673 aa22.96■■□□□ 1.27
APP-215ENST00000474136 HEATR3Q7Z4Q2 680 aa22.96■■□□□ 1.27
APP-215ENST00000474136 RNF19AQ9NV58 838 aa22.96■■□□□ 1.27
APP-215ENST00000474136 NR2E1Q9Y466 385 aa22.96■■□□□ 1.27
APP-215ENST00000474136 IGKV6D-21A0A0A0MT36 114 aa22.95■■□□□ 1.26
APP-215ENST00000474136 PRR23AA6NEV1 266 aa22.95■■□□□ 1.26
APP-215ENST00000474136 BACH1O14867 736 aa22.95■■□□□ 1.26
APP-215ENST00000474136 HOXB8P17481 243 aaPredicted RBP22.95■■□□□ 1.26
APP-215ENST00000474136 DSC3Q14574 896 aa22.95■■□□□ 1.26
APP-215ENST00000474136 KCNT2Q6UVM3 1135 aa22.95■■□□□ 1.26
APP-215ENST00000474136 CASD1Q96PB1 797 aa22.95■■□□□ 1.26
APP-215ENST00000474136 TMEM117Q9H0C3 514 aa22.95■■□□□ 1.26
APP-215ENST00000474136 NGRNQ9NPE2 291 aaKnown RBP22.95■■□□□ 1.26
APP-215ENST00000474136 RNF216Q9NWF9 866 aaPredicted RBP22.95■■□□□ 1.26
APP-215ENST00000474136 SORCS3Q9UPU3 1222 aa22.95■■□□□ 1.26
APP-215ENST00000474136 ZBTB42B2RXF5 422 aa22.94■■□□□ 1.26
APP-215ENST00000474136 SH2B2O14492 632 aaPredicted RBP22.94■■□□□ 1.26
APP-215ENST00000474136 WEE2P0C1S8 567 aa22.94■■□□□ 1.26
APP-215ENST00000474136 SLC26A2P50443 739 aa22.94■■□□□ 1.26
APP-215ENST00000474136 FOXK2Q01167 660 aa22.94■■□□□ 1.26
APP-215ENST00000474136 MTMR3Q13615 1198 aa22.94■■□□□ 1.26
APP-215ENST00000474136 ODR4Q5SWX8 454 aa22.94■■□□□ 1.26
APP-215ENST00000474136 TMC7Q7Z402 723 aa22.94■■□□□ 1.26
APP-215ENST00000474136 CCDC60Q8IWA6 550 aaPredicted RBP22.94■■□□□ 1.26
APP-215ENST00000474136 ELAC1Q9H777 363 aaKnown RBP22.94■■□□□ 1.26
APP-215ENST00000474136 FAM186AA6NE01 2351 aa22.93■■□□□ 1.26
APP-215ENST00000474136 CCDC69A6NI79 296 aa22.93■■□□□ 1.26
APP-215ENST00000474136 VTNP04004 478 aa22.93■■□□□ 1.26
APP-215ENST00000474136 ASGR2P07307 311 aa22.93■■□□□ 1.26
APP-215ENST00000474136 NBL1P41271 181 aa22.93■■□□□ 1.26
APP-215ENST00000474136 KRT32Q14532 448 aa22.93■■□□□ 1.26
APP-215ENST00000474136 CEP55Q53EZ4 464 aa22.93■■□□□ 1.26
APP-215ENST00000474136 ABHD15Q6UXT9 468 aa22.93■■□□□ 1.26
APP-215ENST00000474136 UBALD2Q8IYN6 164 aa22.93■■□□□ 1.26
APP-215ENST00000474136 CASP10Q92851 521 aa22.93■■□□□ 1.26
APP-215ENST00000474136 KCNB2Q92953 911 aa22.93■■□□□ 1.26
APP-215ENST00000474136 ZNF558Q96NG5 402 aa22.93■■□□□ 1.26
APP-215ENST00000474136 ADAM7Q9H2U9 754 aa22.93■■□□□ 1.26
APP-215ENST00000474136 HCFC2Q9Y5Z7 792 aa22.93■■□□□ 1.26
APP-215ENST00000474136 VPS13AQ96RL7 3174 aa22.93■■□□□ 1.26
APP-215ENST00000474136 ATP4AP20648 1035 aa22.92■■□□□ 1.26
APP-215ENST00000474136 CRYBB1P53674 252 aaPredicted RBP22.92■■□□□ 1.26
APP-215ENST00000474136 TSGA10IPQ3SY00 556 aa22.92■■□□□ 1.26
APP-215ENST00000474136 TPRNQ4KMQ1 711 aa22.92■■□□□ 1.26
APP-215ENST00000474136 TYW1BQ6NUM6 668 aa22.92■■□□□ 1.26
APP-215ENST00000474136 PDXDC2PQ6P474 469 aa22.92■■□□□ 1.26
APP-215ENST00000474136 FAM43BQ6ZT52 329 aaPredicted RBP22.92■■□□□ 1.26
APP-215ENST00000474136 MYO10Q9HD67 2058 aa22.91■■□□□ 1.26
APP-215ENST00000474136 MEIS1O00470 390 aa22.91■■□□□ 1.26
APP-215ENST00000474136 GPR32O75388 356 aa22.91■■□□□ 1.26
APP-215ENST00000474136 C22orf31O95567 290 aa22.91■■□□□ 1.26
APP-215ENST00000474136 ZNF484Q5JVG2 852 aa22.91■■□□□ 1.26
APP-215ENST00000474136 FAM160B1Q5W0V3 765 aa22.91■■□□□ 1.26
APP-215ENST00000474136 CREB3L3Q68CJ9 461 aa22.91■■□□□ 1.26
APP-215ENST00000474136 WWC2Q6AWC2 1192 aa22.91■■□□□ 1.26
APP-215ENST00000474136 CES5AQ6NT32 575 aa22.91■■□□□ 1.26
APP-215ENST00000474136 KANK3Q6NY19 840 aa22.91■■□□□ 1.26
APP-215ENST00000474136 TMTC3Q6ZXV5 915 aa22.91■■□□□ 1.26
APP-215ENST00000474136 TRMT1LQ7Z2T5 733 aaKnown RBP22.91■■□□□ 1.26
APP-215ENST00000474136 FRMD5Q7Z6J6 570 aa22.91■■□□□ 1.26
APP-215ENST00000474136 ANO3Q9BYT9 981 aa22.91■■□□□ 1.26
APP-215ENST00000474136 ZNF302Q9NR11 478 aa22.91■■□□□ 1.26
APP-215ENST00000474136 SPG21Q9NZD8 308 aa22.91■■□□□ 1.26
APP-215ENST00000474136 COL1A2P08123 1366 aa22.9■■□□□ 1.26
APP-215ENST00000474136 C2orf71A6NGG8 1288 aa22.9■■□□□ 1.26
APP-215ENST00000474136 SLC27A2O14975 620 aa22.9■■□□□ 1.26
APP-215ENST00000474136 CLASP2O75122 1294 aaKnown RBP22.9■■□□□ 1.26
APP-215ENST00000474136 PPM1AP35813 382 aa22.9■■□□□ 1.26
APP-215ENST00000474136 KRT17Q04695 432 aa22.9■■□□□ 1.26
APP-215ENST00000474136 ASTLQ6HA08 431 aaPredicted RBP22.9■■□□□ 1.26
APP-215ENST00000474136 SWSAP1Q6NVH7 229 aa22.9■■□□□ 1.26
APP-215ENST00000474136 LRRC43Q8N309 656 aa22.9■■□□□ 1.26
APP-215ENST00000474136 METTL13Q8N6R0 699 aa22.9■■□□□ 1.26
APP-215ENST00000474136 C12orf76Q8N812 135 aaPredicted RBP22.9■■□□□ 1.26
APP-215ENST00000474136 MRPL43Q8N983 215 aaKnown RBP22.9■■□□□ 1.26
APP-215ENST00000474136 NECTIN4Q96NY8 510 aa22.9■■□□□ 1.26
APP-215ENST00000474136 ITIH3Q06033 890 aa22.89■■□□□ 1.26
APP-215ENST00000474136 SMC1AQ14683 1233 aaKnown RBP22.89■■□□□ 1.26
APP-215ENST00000474136 CLLU1OSQ5K130 101 aa22.89■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms