RNA–Protein interactions for RNA: ENST00000474065.5

CLASP1-211, Transcript of cytoplasmic linker associated protein 1, humanhuman

TSL 3

Gene CLASP1, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLASP1-211ENST00000474065 NFKBIBQ15653 356 aa8.49□□□□□ -1.05
CLASP1-211ENST00000474065 KLHL40Q2TBA0 621 aa8.49□□□□□ -1.05
CLASP1-211ENST00000474065 ABHD15Q6UXT9 468 aa8.49□□□□□ -1.05
CLASP1-211ENST00000474065 RETREG3Q86VR2 466 aa8.49□□□□□ -1.05
CLASP1-211ENST00000474065 CATSPER3Q86XQ3 398 aa8.49□□□□□ -1.05
CLASP1-211ENST00000474065 ARRDC4Q8NCT1 418 aa8.49□□□□□ -1.05
CLASP1-211ENST00000474065 CNNM3Q8NE01 707 aa8.49□□□□□ -1.05
CLASP1-211ENST00000474065 GLG1Q92896 1179 aa8.49□□□□□ -1.05
CLASP1-211ENST00000474065 CCDC47Q96A33 483 aaKnown RBP8.49□□□□□ -1.05
CLASP1-211ENST00000474065 GPR20Q99678 358 aa8.49□□□□□ -1.05
CLASP1-211ENST00000474065 JPH2Q9BR39 696 aaPredicted RBP8.49□□□□□ -1.05
CLASP1-211ENST00000474065 TIPINQ9BVW5 301 aa8.49□□□□□ -1.05
CLASP1-211ENST00000474065 UPF3AQ9H1J1 476 aaKnown RBP8.49□□□□□ -1.05
CLASP1-211ENST00000474065 TNMDQ9H2S6 317 aa8.49□□□□□ -1.05
CLASP1-211ENST00000474065 XPNPEP3Q9NQH7 507 aa8.49□□□□□ -1.05
CLASP1-211ENST00000474065 PDGFCQ9NRA1 345 aa8.49□□□□□ -1.05
CLASP1-211ENST00000474065 ANKEF1Q9NU02 776 aa8.49□□□□□ -1.05
CLASP1-211ENST00000474065 DBR1Q9UK59 544 aaKnown RBP8.49□□□□□ -1.05
CLASP1-211ENST00000474065 HPSEQ9Y251 543 aa8.49□□□□□ -1.05
CLASP1-211ENST00000474065 DDX49Q9Y6V7 483 aaKnown RBP8.49□□□□□ -1.05
CLASP1-211ENST00000474065 PLXNA1Q9UIW2 1896 aa8.49□□□□□ -1.05
CLASP1-211ENST00000474065 LCTP09848 1927 aa8.48□□□□□ -1.05
CLASP1-211ENST00000474065 A0A1B0GVL5 298 aa8.48□□□□□ -1.05
CLASP1-211ENST00000474065 MOXD2PA6NHM9 499 aa8.48□□□□□ -1.05
CLASP1-211ENST00000474065 POLR2DO15514 142 aaKnown RBP8.48□□□□□ -1.05
CLASP1-211ENST00000474065 DYNC1LI2O43237 492 aaPredicted RBP8.48□□□□□ -1.05
CLASP1-211ENST00000474065 LGR5O75473 907 aa8.48□□□□□ -1.05
CLASP1-211ENST00000474065 SLITRK3O94933 977 aa8.48□□□□□ -1.05
CLASP1-211ENST00000474065 ZNF202O95125 648 aa8.48□□□□□ -1.05
CLASP1-211ENST00000474065 ARIH2O95376 493 aa8.48□□□□□ -1.05
CLASP1-211ENST00000474065 CCNE2O96020 404 aa8.48□□□□□ -1.05
CLASP1-211ENST00000474065 RPLP2P05387 115 aaKnown RBP8.48□□□□□ -1.05
CLASP1-211ENST00000474065 MMP3P08254 477 aa8.48□□□□□ -1.05
CLASP1-211ENST00000474065 SLFN14P0C7P3 912 aa8.48□□□□□ -1.05
CLASP1-211ENST00000474065 HOXD8P13378 290 aaPredicted RBP8.48□□□□□ -1.05
CLASP1-211ENST00000474065 NDUFA8P51970 172 aa8.48□□□□□ -1.05
CLASP1-211ENST00000474065 FSCN1Q16658 493 aaKnown RBP8.48□□□□□ -1.05
CLASP1-211ENST00000474065 HSDL1Q3SXM5 330 aa8.48□□□□□ -1.05
CLASP1-211ENST00000474065 XKR3Q5GH77 459 aa8.48□□□□□ -1.05
CLASP1-211ENST00000474065 PRAMEF19Q5SWL8 479 aa8.48□□□□□ -1.05
CLASP1-211ENST00000474065 SWSAP1Q6NVH7 229 aa8.48□□□□□ -1.05
CLASP1-211ENST00000474065 PDXDC2PQ6P474 469 aa8.48□□□□□ -1.05
CLASP1-211ENST00000474065 SV2BQ7L1I2 683 aa8.48□□□□□ -1.05
CLASP1-211ENST00000474065 TPH2Q8IWU9 490 aa8.48□□□□□ -1.05
CLASP1-211ENST00000474065 CKAP2LQ8IYA6 745 aa8.48□□□□□ -1.05
CLASP1-211ENST00000474065 FMR1NBQ8N0W7 255 aaPredicted RBP8.48□□□□□ -1.05
CLASP1-211ENST00000474065 EPSTI1Q96J88 318 aa8.48□□□□□ -1.05
CLASP1-211ENST00000474065 LXNQ9BS40 222 aa8.48□□□□□ -1.05
CLASP1-211ENST00000474065 TSEN34Q9BSV6 310 aaKnown RBP8.48□□□□□ -1.05
CLASP1-211ENST00000474065 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.48□□□□□ -1.05
CLASP1-211ENST00000474065 ATP13A2Q9NQ11 1180 aa8.48□□□□□ -1.05
CLASP1-211ENST00000474065 GABBR1Q9UBS5 961 aa8.48□□□□□ -1.05
CLASP1-211ENST00000474065 KIAA1024Q9UPX6 916 aa8.48□□□□□ -1.05
CLASP1-211ENST00000474065 MAFBQ9Y5Q3 323 aaPredicted RBP8.48□□□□□ -1.05
CLASP1-211ENST00000474065 IGSF9BQ9UPX0 1349 aa8.48□□□□□ -1.05
CLASP1-211ENST00000474065 SMCHD1A6NHR9 2005 aa8.47□□□□□ -1.05
CLASP1-211ENST00000474065 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.47□□□□□ -1.05
CLASP1-211ENST00000474065 GSTTP1A0A1W2PQM5 241 aa8.47□□□□□ -1.05
CLASP1-211ENST00000474065 EML1O00423 815 aa8.47□□□□□ -1.05
CLASP1-211ENST00000474065 GAS2O43903 313 aaKnown RBP8.47□□□□□ -1.05
CLASP1-211ENST00000474065 HBP1O60381 514 aa8.47□□□□□ -1.05
CLASP1-211ENST00000474065 SMC2O95347 1197 aa8.47□□□□□ -1.05
CLASP1-211ENST00000474065 EYA4O95677 639 aa8.47□□□□□ -1.05
CLASP1-211ENST00000474065 C6orf222P0C671 652 aaPredicted RBP8.47□□□□□ -1.05
CLASP1-211ENST00000474065 SPATA31C1P0DKV0 1188 aa8.47□□□□□ -1.05
CLASP1-211ENST00000474065 GNAT1P11488 350 aa8.47□□□□□ -1.05
CLASP1-211ENST00000474065 PLCG1P19174 1290 aa8.47□□□□□ -1.05
CLASP1-211ENST00000474065 SCP2P22307 547 aa8.47□□□□□ -1.05
CLASP1-211ENST00000474065 YWHABP31946 246 aaKnown RBP8.47□□□□□ -1.05
CLASP1-211ENST00000474065 SP4Q02446 784 aa8.47□□□□□ -1.05
CLASP1-211ENST00000474065 GRIN1Q05586 938 aa8.47□□□□□ -1.05
CLASP1-211ENST00000474065 KARSQ15046 597 aaKnown RBP8.47□□□□□ -1.05
CLASP1-211ENST00000474065 ZRSR1Q15695 479 aaKnown RBP8.47□□□□□ -1.05
CLASP1-211ENST00000474065 TMEM119Q4V9L6 283 aa8.47□□□□□ -1.05
CLASP1-211ENST00000474065 GNASQ5JWF2 1037 aa8.47□□□□□ -1.05
CLASP1-211ENST00000474065 SPECC1Q5M775 1068 aa8.47□□□□□ -1.05
CLASP1-211ENST00000474065 PTCRAQ6ISU1 281 aaPredicted RBP8.47□□□□□ -1.05
CLASP1-211ENST00000474065 TRPV1Q8NER1 839 aa8.47□□□□□ -1.05
CLASP1-211ENST00000474065 ENGASEQ8NFI3 743 aa8.47□□□□□ -1.05
CLASP1-211ENST00000474065 AFG1LQ8WV93 481 aa8.47□□□□□ -1.05
CLASP1-211ENST00000474065 LARP4BQ92615 738 aaKnown RBP8.47□□□□□ -1.05
CLASP1-211ENST00000474065 HPS1Q92902 700 aa8.47□□□□□ -1.05
CLASP1-211ENST00000474065 GJA10Q969M2 543 aa8.47□□□□□ -1.05
CLASP1-211ENST00000474065 DHX58Q96C10 678 aa8.47□□□□□ -1.05
CLASP1-211ENST00000474065 ARMC5Q96C12 935 aa8.47□□□□□ -1.05
CLASP1-211ENST00000474065 DYDC2Q96IM9 177 aa8.47□□□□□ -1.05
CLASP1-211ENST00000474065 CHAMP1Q96JM3 812 aa8.47□□□□□ -1.05
CLASP1-211ENST00000474065 MMTAG2Q9BU76 263 aaKnown RBP8.47□□□□□ -1.05
CLASP1-211ENST00000474065 NUP62CLQ9H1M0 184 aa8.47□□□□□ -1.05
CLASP1-211ENST00000474065 DACT1Q9NYF0 836 aa8.47□□□□□ -1.05
CLASP1-211ENST00000474065 PCDHGC3Q9UN70 934 aa8.47□□□□□ -1.05
CLASP1-211ENST00000474065 COL1A2P08123 1366 aa8.47□□□□□ -1.05
CLASP1-211ENST00000474065 ZNFX1Q9P2E3 1918 aaKnown RBP8.46□□□□□ -1.05
CLASP1-211ENST00000474065 ARHGEF35A5YM69 484 aa8.46□□□□□ -1.06
CLASP1-211ENST00000474065 RRN3P2A6NIE6 340 aa8.46□□□□□ -1.06
CLASP1-211ENST00000474065 PP2D1A8MPX8 630 aa8.46□□□□□ -1.06
CLASP1-211ENST00000474065 H3BRB1 525 aa8.46□□□□□ -1.06
CLASP1-211ENST00000474065 MAGEB2O15479 319 aa8.46□□□□□ -1.06
CLASP1-211ENST00000474065 TRAK2O60296 914 aa8.46□□□□□ -1.06
CLASP1-211ENST00000474065 GADD45BO75293 160 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms