RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 OSBPL5Q9H0X9 879 aaPredicted RBP4.29□□□□□ -1.72
XRN1-209ENST00000472625 CNNM2Q9H8M5 875 aa4.29□□□□□ -1.72
XRN1-209ENST00000472625 IGSF5Q9NSI5 407 aa4.29□□□□□ -1.72
XRN1-209ENST00000472625 CPA4Q9UI42 421 aa4.29□□□□□ -1.72
XRN1-209ENST00000472625 HERC5Q9UII4 1024 aaKnown RBP4.29□□□□□ -1.72
XRN1-209ENST00000472625 AGTPBP1Q9UPW5 1226 aa4.29□□□□□ -1.72
XRN1-209ENST00000472625 PCDHAC2Q9Y5I4 1007 aa4.29□□□□□ -1.72
XRN1-209ENST00000472625 A0A1B0GUL6 1792 aa4.29□□□□□ -1.72
XRN1-209ENST00000472625 RFX7Q2KHR2 1363 aa4.28□□□□□ -1.72
XRN1-209ENST00000472625 MROH7-TTC4A0A0A0MT08 1334 aa4.28□□□□□ -1.72
XRN1-209ENST00000472625 SHISA3A0PJX4 238 aa4.28□□□□□ -1.72
XRN1-209ENST00000472625 ADCY3O60266 1144 aa4.28□□□□□ -1.72
XRN1-209ENST00000472625 GLRX3O76003 335 aaKnown RBP4.28□□□□□ -1.72
XRN1-209ENST00000472625 SGPL1O95470 568 aa4.28□□□□□ -1.72
XRN1-209ENST00000472625 BAG3O95817 575 aa4.28□□□□□ -1.72
XRN1-209ENST00000472625 ESR1P03372 595 aa4.28□□□□□ -1.72
XRN1-209ENST00000472625 GNAI3P08754 354 aa4.28□□□□□ -1.72
XRN1-209ENST00000472625 RGS3P49796 1198 aa4.28□□□□□ -1.72
XRN1-209ENST00000472625 CLCN7P51798 805 aa4.28□□□□□ -1.72
XRN1-209ENST00000472625 PRKCZQ05513 592 aa4.28□□□□□ -1.72
XRN1-209ENST00000472625 TCP10Q12799 353 aa4.28□□□□□ -1.72
XRN1-209ENST00000472625 MLANAQ16655 118 aa4.28□□□□□ -1.72
XRN1-209ENST00000472625 LRRC24Q50LG9 513 aa4.28□□□□□ -1.72
XRN1-209ENST00000472625 SEZ6Q53EL9 994 aa4.28□□□□□ -1.72
XRN1-209ENST00000472625 GORABQ5T7V8 394 aa4.28□□□□□ -1.72
XRN1-209ENST00000472625 CDC42EP5Q6NZY7 148 aa4.28□□□□□ -1.72
XRN1-209ENST00000472625 GADL1Q6ZQY3 521 aa4.28□□□□□ -1.72
XRN1-209ENST00000472625 MIGA2Q7L4E1 593 aa4.28□□□□□ -1.72
XRN1-209ENST00000472625 ZSWIM9Q86XI8 627 aa4.28□□□□□ -1.72
XRN1-209ENST00000472625 CCAR1Q8IX12 1150 aaKnown RBP4.28□□□□□ -1.72
XRN1-209ENST00000472625 REXO1Q8N1G1 1221 aaKnown RBP4.28□□□□□ -1.72
XRN1-209ENST00000472625 ANKRD44Q8N8A2 993 aa4.28□□□□□ -1.72
XRN1-209ENST00000472625 DTWD2Q8NBA8 298 aa4.28□□□□□ -1.72
XRN1-209ENST00000472625 RNF34Q969K3 372 aa4.28□□□□□ -1.72
XRN1-209ENST00000472625 SHISA4Q96DD7 197 aa4.28□□□□□ -1.72
XRN1-209ENST00000472625 ATG4CQ96DT6 458 aa4.28□□□□□ -1.72
XRN1-209ENST00000472625 LIN37Q96GY3 246 aaPredicted RBP4.28□□□□□ -1.72
XRN1-209ENST00000472625 KAZALD1Q96I82 304 aa4.28□□□□□ -1.72
XRN1-209ENST00000472625 SPON2Q9BUD6 331 aa4.28□□□□□ -1.72
XRN1-209ENST00000472625 KRTAP4-5Q9BYR2 181 aa4.28□□□□□ -1.72
XRN1-209ENST00000472625 PUS3Q9BZE2 481 aaKnown RBP4.28□□□□□ -1.72
XRN1-209ENST00000472625 ARHGAP39Q9C0H5 1083 aa4.28□□□□□ -1.72
XRN1-209ENST00000472625 DHX36Q9H2U1 1008 aaKnown RBP4.28□□□□□ -1.72
XRN1-209ENST00000472625 SP110Q9HB58 689 aa4.28□□□□□ -1.72
XRN1-209ENST00000472625 SMC4Q9NTJ3 1288 aa4.28□□□□□ -1.72
XRN1-209ENST00000472625 USP40Q9NVE5 1235 aa4.28□□□□□ -1.72
XRN1-209ENST00000472625 CTNND2Q9UQB3 1225 aa4.28□□□□□ -1.72
XRN1-209ENST00000472625 ZHX2Q9Y6X8 837 aa4.28□□□□□ -1.72
XRN1-209ENST00000472625 A0A0C4DFX4 3053 aa4.28□□□□□ -1.72
XRN1-209ENST00000472625 KIAA0100Q14667 2235 aaKnown RBP4.27□□□□□ -1.73
XRN1-209ENST00000472625 AOX1Q06278 1338 aa4.27□□□□□ -1.73
XRN1-209ENST00000472625 ZNF521Q96K83 1311 aa4.27□□□□□ -1.73
XRN1-209ENST00000472625 ZNF503-AS2A6NEH8 195 aa4.27□□□□□ -1.73
XRN1-209ENST00000472625 LRRC10BA6NIK2 292 aa4.27□□□□□ -1.73
XRN1-209ENST00000472625 TRIM75PA6NK02 468 aa4.27□□□□□ -1.73
XRN1-209ENST00000472625 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.27□□□□□ -1.73
XRN1-209ENST00000472625 TNFRSF10CO14798 259 aa4.27□□□□□ -1.73
XRN1-209ENST00000472625 SCAMP3O14828 347 aaKnown RBP4.27□□□□□ -1.73
XRN1-209ENST00000472625 RGS13O14921 159 aa4.27□□□□□ -1.73
XRN1-209ENST00000472625 IPO8O15397 1037 aaKnown RBP4.27□□□□□ -1.73
XRN1-209ENST00000472625 MSCO60682 206 aa4.27□□□□□ -1.73
XRN1-209ENST00000472625 BPNT1O95861 308 aa4.27□□□□□ -1.73
XRN1-209ENST00000472625 TFRCP02786 760 aaKnown RBP4.27□□□□□ -1.73
XRN1-209ENST00000472625 ASNSP08243 561 aa4.27□□□□□ -1.73
XRN1-209ENST00000472625 UQCRFS1P1P0C7P4 283 aa4.27□□□□□ -1.73
XRN1-209ENST00000472625 CYP2C8P10632 490 aa4.27□□□□□ -1.73
XRN1-209ENST00000472625 PRDX5P30044 214 aa4.27□□□□□ -1.73
XRN1-209ENST00000472625 MAPK4P31152 587 aa4.27□□□□□ -1.73
XRN1-209ENST00000472625 BTDP43251 543 aa4.27□□□□□ -1.73
XRN1-209ENST00000472625 FLT3LGP49771 235 aa4.27□□□□□ -1.73
XRN1-209ENST00000472625 CCNA1P78396 465 aa4.27□□□□□ -1.73
XRN1-209ENST00000472625 IRX3P78415 501 aaPredicted RBP4.27□□□□□ -1.73
XRN1-209ENST00000472625 KCNMB1Q16558 191 aa4.27□□□□□ -1.73
XRN1-209ENST00000472625 UBE2Q1Q7Z7E8 422 aa4.27□□□□□ -1.73
XRN1-209ENST00000472625 TMEM192Q8IY95 271 aa4.27□□□□□ -1.73
XRN1-209ENST00000472625 FAM9BQ8IZU0 186 aa4.27□□□□□ -1.73
XRN1-209ENST00000472625 KREMEN1Q96MU8 473 aa4.27□□□□□ -1.73
XRN1-209ENST00000472625 DEFB118Q96PH6 123 aa4.27□□□□□ -1.73
XRN1-209ENST00000472625 KIF2CQ99661 725 aa4.27□□□□□ -1.73
XRN1-209ENST00000472625 USP44Q9H0E7 712 aa4.27□□□□□ -1.73
XRN1-209ENST00000472625 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.27□□□□□ -1.73
XRN1-209ENST00000472625 KCNK12Q9HB15 430 aa4.27□□□□□ -1.73
XRN1-209ENST00000472625 CWC22Q9HCG8 908 aaKnown RBP4.27□□□□□ -1.73
XRN1-209ENST00000472625 TMOD4Q9NZQ9 345 aa4.27□□□□□ -1.73
XRN1-209ENST00000472625 GMIPQ9P107 970 aa4.27□□□□□ -1.73
XRN1-209ENST00000472625 ABCF2Q9UG63 623 aa4.27□□□□□ -1.73
XRN1-209ENST00000472625 EBF1Q9UH73 591 aa4.27□□□□□ -1.73
XRN1-209ENST00000472625 KLHL3Q9UH77 587 aa4.27□□□□□ -1.73
XRN1-209ENST00000472625 ZNF281Q9Y2X9 895 aa4.27□□□□□ -1.73
XRN1-209ENST00000472625 AFG3L2Q9Y4W6 797 aa4.27□□□□□ -1.73
XRN1-209ENST00000472625 COL6A3P12111 3177 aa4.27□□□□□ -1.73
XRN1-209ENST00000472625 RPTORQ8N122 1335 aa4.26□□□□□ -1.73
XRN1-209ENST00000472625 GPR75-ASB3A0A0A6YYF3 556 aa4.26□□□□□ -1.73
XRN1-209ENST00000472625 C19orf81C9J6K1 198 aa4.26□□□□□ -1.73
XRN1-209ENST00000472625 SHOXO15266 292 aa4.26□□□□□ -1.73
XRN1-209ENST00000472625 SRGAP3O43295 1099 aa4.26□□□□□ -1.73
XRN1-209ENST00000472625 HLA-DOAP06340 250 aa4.26□□□□□ -1.73
XRN1-209ENST00000472625 ZKSCAN1P17029 563 aaPredicted RBP4.26□□□□□ -1.73
XRN1-209ENST00000472625 BMP8BP34820 402 aa4.26□□□□□ -1.73
XRN1-209ENST00000472625 RGS2P41220 211 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms