RNA–Protein interactions for RNA: ENST00000472608.5

ABCF3-209, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 657 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-209ENST00000472608 SMC3Q9UQE7 1217 aa16.14■□□□□ 0.17
ABCF3-209ENST00000472608 BTBD18B2RXH4 712 aa16.13■□□□□ 0.17
ABCF3-209ENST00000472608 TREHO43280 583 aa16.13■□□□□ 0.17
ABCF3-209ENST00000472608 GCFC2P16383 781 aaKnown RBP16.13■□□□□ 0.17
ABCF3-209ENST00000472608 GJB2P29033 226 aa16.13■□□□□ 0.17
ABCF3-209ENST00000472608 VCPP55072 806 aaKnown RBP16.13■□□□□ 0.17
ABCF3-209ENST00000472608 NR5A1Q13285 461 aa16.13■□□□□ 0.17
ABCF3-209ENST00000472608 NEK8Q86SG6 692 aa16.13■□□□□ 0.17
ABCF3-209ENST00000472608 EFHBQ8N7U6 833 aa16.13■□□□□ 0.17
ABCF3-209ENST00000472608 P2RX5Q93086 422 aa16.13■□□□□ 0.17
ABCF3-209ENST00000472608 LENG9Q96B70 501 aa16.13■□□□□ 0.17
ABCF3-209ENST00000472608 GPR20Q99678 358 aa16.13■□□□□ 0.17
ABCF3-209ENST00000472608 SDF4Q9BRK5 362 aa16.13■□□□□ 0.17
ABCF3-209ENST00000472608 RNPEPQ9H4A4 650 aa16.13■□□□□ 0.17
ABCF3-209ENST00000472608 IGFLR1Q9H665 355 aa16.13■□□□□ 0.17
ABCF3-209ENST00000472608 BCAS3Q9H6U6 928 aa16.13■□□□□ 0.17
ABCF3-209ENST00000472608 TBC1D22BQ9NU19 505 aa16.13■□□□□ 0.17
ABCF3-209ENST00000472608 PLAGL2Q9UPG8 496 aa16.13■□□□□ 0.17
ABCF3-209ENST00000472608 ADGRA3Q8IWK6 1321 aa16.13■□□□□ 0.17
ABCF3-209ENST00000472608 H3BRB1 525 aa16.12■□□□□ 0.17
ABCF3-209ENST00000472608 IPO5O00410 1097 aaKnown RBP16.12■□□□□ 0.17
ABCF3-209ENST00000472608 NOP56O00567 594 aaKnown RBP16.12■□□□□ 0.17
ABCF3-209ENST00000472608 INF2Q27J81 1249 aa16.12■□□□□ 0.17
ABCF3-209ENST00000472608 PRR16Q569H4 304 aa16.12■□□□□ 0.17
ABCF3-209ENST00000472608 NAALADL2Q58DX5 795 aa16.12■□□□□ 0.17
ABCF3-209ENST00000472608 PIK3AP1Q6ZUJ8 805 aa16.12■□□□□ 0.17
ABCF3-209ENST00000472608 ERMP1Q7Z2K6 904 aa16.12■□□□□ 0.17
ABCF3-209ENST00000472608 SEPT1Q8WYJ6 367 aa16.12■□□□□ 0.17
ABCF3-209ENST00000472608 ATOH1Q92858 354 aaPredicted RBP16.12■□□□□ 0.17
ABCF3-209ENST00000472608 TUT1Q9H6E5 874 aaKnown RBP16.12■□□□□ 0.17
ABCF3-209ENST00000472608 PLXNA3P51805 1871 aa16.12■□□□□ 0.17
ABCF3-209ENST00000472608 DHX15O43143 795 aaKnown RBP16.11■□□□□ 0.17
ABCF3-209ENST00000472608 SMIM10L2AP0DMW4 78 aa16.11■□□□□ 0.17
ABCF3-209ENST00000472608 SMIM10L2BP0DMW5 78 aa16.11■□□□□ 0.17
ABCF3-209ENST00000472608 U2AF2P26368 475 aaKnown RBP eCLIP16.11■□□□□ 0.17
ABCF3-209ENST00000472608 NDUFV1P49821 464 aa16.11■□□□□ 0.17
ABCF3-209ENST00000472608 ADAM17P78536 824 aa16.11■□□□□ 0.17
ABCF3-209ENST00000472608 ITGB3BPQ13352 177 aaPredicted RBP16.11■□□□□ 0.17
ABCF3-209ENST00000472608 PPP2R3CQ969Q6 453 aa16.11■□□□□ 0.17
ABCF3-209ENST00000472608 RIT2Q99578 217 aa16.11■□□□□ 0.17
ABCF3-209ENST00000472608 ZNF577Q9BSK1 485 aa16.11■□□□□ 0.17
ABCF3-209ENST00000472608 PHF7Q9BWX1 381 aaPredicted RBP16.11■□□□□ 0.17
ABCF3-209ENST00000472608 JPH1Q9HDC5 661 aaPredicted RBP16.11■□□□□ 0.17
ABCF3-209ENST00000472608 SLC9A2Q9UBY0 812 aa16.11■□□□□ 0.17
ABCF3-209ENST00000472608 ATG7O95352 703 aa16.1■□□□□ 0.17
ABCF3-209ENST00000472608 CTSHP09668 335 aa16.1■□□□□ 0.17
ABCF3-209ENST00000472608 DNAJB1P25685 340 aa16.1■□□□□ 0.17
ABCF3-209ENST00000472608 GUCY1B3Q02153 619 aa16.1■□□□□ 0.17
ABCF3-209ENST00000472608 LETM2Q2VYF4 491 aa16.1■□□□□ 0.17
ABCF3-209ENST00000472608 EARS2Q5JPH6 523 aaKnown RBP16.1■□□□□ 0.17
ABCF3-209ENST00000472608 ASCL5Q7RTU5 278 aa16.1■□□□□ 0.17
ABCF3-209ENST00000472608 USP15Q9Y4E8 981 aaPredicted RBP16.1■□□□□ 0.17
ABCF3-209ENST00000472608 TTC3P53804 2025 aa16.09■□□□□ 0.17
ABCF3-209ENST00000472608 VPS13AQ96RL7 3174 aa16.09■□□□□ 0.17
ABCF3-209ENST00000472608 GSTTP1A0A1W2PQM5 241 aa16.09■□□□□ 0.17
ABCF3-209ENST00000472608 ENPP3O14638 875 aa16.09■□□□□ 0.17
ABCF3-209ENST00000472608 TBX3O15119 743 aa16.09■□□□□ 0.17
ABCF3-209ENST00000472608 MSH4O15457 936 aa16.09■□□□□ 0.17
ABCF3-209ENST00000472608 TDP2O95551 362 aa16.09■□□□□ 0.17
ABCF3-209ENST00000472608 GLP2RO95838 553 aa16.09■□□□□ 0.17
ABCF3-209ENST00000472608 GNAT1P11488 350 aa16.09■□□□□ 0.17
ABCF3-209ENST00000472608 ATF7P17544 494 aaPredicted RBP16.09■□□□□ 0.17
ABCF3-209ENST00000472608 PDCP20941 246 aa16.09■□□□□ 0.17
ABCF3-209ENST00000472608 ZNF746Q6NUN9 644 aaPredicted RBP16.09■□□□□ 0.17
ABCF3-209ENST00000472608 ADGRD2Q7Z7M1 963 aa16.09■□□□□ 0.17
ABCF3-209ENST00000472608 NOSTRINQ8IVI9 506 aa16.09■□□□□ 0.17
ABCF3-209ENST00000472608 HSCBQ8IWL3 235 aa16.09■□□□□ 0.17
ABCF3-209ENST00000472608 CRIPAKQ8N1N5 446 aa16.09■□□□□ 0.17
ABCF3-209ENST00000472608 SPPL3Q8TCT6 385 aa16.09■□□□□ 0.17
ABCF3-209ENST00000472608 SUSD6Q92537 303 aa16.09■□□□□ 0.17
ABCF3-209ENST00000472608 SLC5A5Q92911 643 aa16.09■□□□□ 0.17
ABCF3-209ENST00000472608 FAM20AQ96MK3 541 aa16.09■□□□□ 0.17
ABCF3-209ENST00000472608 DDX25Q9UHL0 483 aaKnown RBP16.09■□□□□ 0.17
ABCF3-209ENST00000472608 GVINP1Q7Z2Y8 2422 aa16.09■□□□□ 0.17
ABCF3-209ENST00000472608 SORBS3O60504 671 aa16.08■□□□□ 0.16
ABCF3-209ENST00000472608 CCNT1O60563 726 aaKnown RBP16.08■□□□□ 0.16
ABCF3-209ENST00000472608 DGKIO75912 1065 aa16.08■□□□□ 0.16
ABCF3-209ENST00000472608 CHRNA1P02708 482 aa16.08■□□□□ 0.16
ABCF3-209ENST00000472608 LGALS2P05162 132 aa16.08■□□□□ 0.16
ABCF3-209ENST00000472608 ITGB1P05556 798 aa16.08■□□□□ 0.16
ABCF3-209ENST00000472608 TCF7P36402 384 aaPredicted RBP16.08■□□□□ 0.16
ABCF3-209ENST00000472608 NBL1P41271 181 aa16.08■□□□□ 0.16
ABCF3-209ENST00000472608 TRAPPC10P48553 1259 aa16.08■□□□□ 0.16
ABCF3-209ENST00000472608 FOSBP53539 338 aa16.08■□□□□ 0.16
ABCF3-209ENST00000472608 ACTR2P61160 394 aa16.08■□□□□ 0.16
ABCF3-209ENST00000472608 KRT76Q01546 638 aa16.08■□□□□ 0.16
ABCF3-209ENST00000472608 ORC2Q13416 577 aaPredicted RBP16.08■□□□□ 0.16
ABCF3-209ENST00000472608 BTG3Q14201 252 aaPredicted RBP16.08■□□□□ 0.16
ABCF3-209ENST00000472608 LARP1BQ659C4 914 aaKnown RBP16.08■□□□□ 0.16
ABCF3-209ENST00000472608 SMAP1Q8IYB5 467 aaPredicted RBP16.08■□□□□ 0.16
ABCF3-209ENST00000472608 ETNPPLQ8TBG4 499 aa16.08■□□□□ 0.16
ABCF3-209ENST00000472608 KCNMB3Q9NPA1 279 aa16.08■□□□□ 0.16
ABCF3-209ENST00000472608 PKD2L1Q9P0L9 805 aa16.08■□□□□ 0.16
ABCF3-209ENST00000472608 IGKV6D-21A0A0A0MT36 114 aa16.07■□□□□ 0.16
ABCF3-209ENST00000472608 PRR23AA6NEV1 266 aa16.07■□□□□ 0.16
ABCF3-209ENST00000472608 H0Y858 1186 aa16.07■□□□□ 0.16
ABCF3-209ENST00000472608 H3BQV1 296 aa16.07■□□□□ 0.16
ABCF3-209ENST00000472608 GALR2O43603 387 aaPredicted RBP16.07■□□□□ 0.16
ABCF3-209ENST00000472608 PSMD10O75832 226 aa16.07■□□□□ 0.16
ABCF3-209ENST00000472608 GNL2Q13823 731 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms