RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 RUFY2Q8WXA3 655 aa22.56■■□□□ 1.2
CCDC78-208ENST00000471861 MAP4K1Q92918 833 aa22.56■■□□□ 1.2
CCDC78-208ENST00000471861 ELAC1Q9H777 363 aaKnown RBP22.56■■□□□ 1.2
CCDC78-208ENST00000471861 TSHZ2Q9NRE2 1034 aa22.56■■□□□ 1.2
CCDC78-208ENST00000471861 SORCS3Q9UPU3 1222 aa22.56■■□□□ 1.2
CCDC78-208ENST00000471861 HCFC2Q9Y5Z7 792 aa22.56■■□□□ 1.2
CCDC78-208ENST00000471861 COL1A2P08123 1366 aa22.55■■□□□ 1.2
CCDC78-208ENST00000471861 DDX39AO00148 427 aaKnown RBP22.55■■□□□ 1.2
CCDC78-208ENST00000471861 GPR182O15218 404 aa22.55■■□□□ 1.2
CCDC78-208ENST00000471861 GPR32O75388 356 aa22.55■■□□□ 1.2
CCDC78-208ENST00000471861 C22orf31O95567 290 aa22.55■■□□□ 1.2
CCDC78-208ENST00000471861 NBL1P41271 181 aa22.55■■□□□ 1.2
CCDC78-208ENST00000471861 MTMR3Q13615 1198 aa22.55■■□□□ 1.2
CCDC78-208ENST00000471861 WWC2Q6AWC2 1192 aa22.55■■□□□ 1.2
CCDC78-208ENST00000471861 CASC1Q6TDU7 716 aa22.55■■□□□ 1.2
CCDC78-208ENST00000471861 KCNT2Q6UVM3 1135 aa22.55■■□□□ 1.2
CCDC78-208ENST00000471861 NFXL1Q6ZNB6 911 aa22.55■■□□□ 1.2
CCDC78-208ENST00000471861 MTA3Q9BTC8 594 aa22.55■■□□□ 1.2
CCDC78-208ENST00000471861 TMEM117Q9H0C3 514 aa22.55■■□□□ 1.2
CCDC78-208ENST00000471861 NGRNQ9NPE2 291 aaKnown RBP22.55■■□□□ 1.2
CCDC78-208ENST00000471861 RBM8AQ9Y5S9 174 aaKnown RBP22.55■■□□□ 1.2
CCDC78-208ENST00000471861 PTPRZ1P23471 2315 aaPredicted RBP22.54■■□□□ 1.2
CCDC78-208ENST00000471861 CCDC69A6NI79 296 aa22.54■■□□□ 1.2
CCDC78-208ENST00000471861 MEIS1O00470 390 aa22.54■■□□□ 1.2
CCDC78-208ENST00000471861 VTNP04004 478 aa22.54■■□□□ 1.2
CCDC78-208ENST00000471861 ANO3Q9BYT9 981 aa22.54■■□□□ 1.2
CCDC78-208ENST00000471861 RNF216Q9NWF9 866 aaPredicted RBP22.54■■□□□ 1.2
CCDC78-208ENST00000471861 NR2E1Q9Y466 385 aa22.54■■□□□ 1.2
CCDC78-208ENST00000471861 EVPLQ92817 2033 aa22.53■■□□□ 1.2
CCDC78-208ENST00000471861 CRYBB1P53674 252 aaPredicted RBP22.53■■□□□ 1.2
CCDC78-208ENST00000471861 UBALD2Q8IYN6 164 aa22.53■■□□□ 1.2
CCDC78-208ENST00000471861 EXOC6Q8TAG9 804 aa22.53■■□□□ 1.2
CCDC78-208ENST00000471861 CASP10Q92851 521 aa22.53■■□□□ 1.2
CCDC78-208ENST00000471861 ADAM7Q9H2U9 754 aa22.53■■□□□ 1.2
CCDC78-208ENST00000471861 PUF60Q9UHX1 559 aaKnown RBP22.53■■□□□ 1.2
CCDC78-208ENST00000471861 CNTNAP5Q8WYK1 1306 aa22.53■■□□□ 1.2
CCDC78-208ENST00000471861 RIF1Q5UIP0 2472 aaKnown RBP22.52■■□□□ 1.2
CCDC78-208ENST00000471861 C2orf71A6NGG8 1288 aa22.52■■□□□ 1.2
CCDC78-208ENST00000471861 BACH1O14867 736 aa22.52■■□□□ 1.2
CCDC78-208ENST00000471861 ASGR2P07307 311 aa22.52■■□□□ 1.2
CCDC78-208ENST00000471861 WEE2P0C1S8 567 aa22.52■■□□□ 1.2
CCDC78-208ENST00000471861 FOXK2Q01167 660 aa22.52■■□□□ 1.2
CCDC78-208ENST00000471861 ZNF484Q5JVG2 852 aa22.52■■□□□ 1.2
CCDC78-208ENST00000471861 ODR4Q5SWX8 454 aa22.52■■□□□ 1.2
CCDC78-208ENST00000471861 LRRC43Q8N309 656 aa22.52■■□□□ 1.2
CCDC78-208ENST00000471861 FEZF2Q8TBJ5 459 aa22.52■■□□□ 1.2
CCDC78-208ENST00000471861 TMEM87BQ96K49 555 aa22.52■■□□□ 1.2
CCDC78-208ENST00000471861 ZNF558Q96NG5 402 aa22.52■■□□□ 1.2
CCDC78-208ENST00000471861 RIC8AQ9NPQ8 531 aa22.52■■□□□ 1.2
CCDC78-208ENST00000471861 ZNF302Q9NR11 478 aa22.52■■□□□ 1.2
CCDC78-208ENST00000471861 DHX15O43143 795 aaKnown RBP22.51■■□□□ 1.19
CCDC78-208ENST00000471861 CALM1P0DP23 149 aa22.51■■□□□ 1.19
CCDC78-208ENST00000471861 CALM2P0DP24 149 aa22.51■■□□□ 1.19
CCDC78-208ENST00000471861 CALM3P0DP25 149 aa22.51■■□□□ 1.19
CCDC78-208ENST00000471861 PPM1AP35813 382 aa22.51■■□□□ 1.19
CCDC78-208ENST00000471861 SREBF1P36956 1147 aa22.51■■□□□ 1.19
CCDC78-208ENST00000471861 LIFRP42702 1097 aa22.51■■□□□ 1.19
CCDC78-208ENST00000471861 CLLU1OSQ5K130 101 aa22.51■■□□□ 1.19
CCDC78-208ENST00000471861 FAM160B1Q5W0V3 765 aa22.51■■□□□ 1.19
CCDC78-208ENST00000471861 PDXDC2PQ6P474 469 aa22.51■■□□□ 1.19
CCDC78-208ENST00000471861 TMC7Q7Z402 723 aa22.51■■□□□ 1.19
CCDC78-208ENST00000471861 SLC39A11Q8N1S5 342 aa22.51■■□□□ 1.19
CCDC78-208ENST00000471861 FANCBQ8NB91 859 aa22.51■■□□□ 1.19
CCDC78-208ENST00000471861 LRRC2Q9BYS8 371 aa22.51■■□□□ 1.19
CCDC78-208ENST00000471861 FAM186AA6NE01 2351 aa22.51■■□□□ 1.19
CCDC78-208ENST00000471861 MYO10Q9HD67 2058 aa22.51■■□□□ 1.19
CCDC78-208ENST00000471861 FAM86B1E9PN63 330 aa22.5■■□□□ 1.19
CCDC78-208ENST00000471861 CLASP2O75122 1294 aaKnown RBP22.5■■□□□ 1.19
CCDC78-208ENST00000471861 FAM86B2P0C5J1 330 aa22.5■■□□□ 1.19
CCDC78-208ENST00000471861 MCM5P33992 734 aa22.5■■□□□ 1.19
CCDC78-208ENST00000471861 CLCN3P51790 818 aa22.5■■□□□ 1.19
CCDC78-208ENST00000471861 ITIH3Q06033 890 aa22.5■■□□□ 1.19
CCDC78-208ENST00000471861 TPRNQ4KMQ1 711 aa22.5■■□□□ 1.19
CCDC78-208ENST00000471861 MICU3Q86XE3 530 aa22.5■■□□□ 1.19
CCDC78-208ENST00000471861 TMTC2Q8N394 836 aa22.5■■□□□ 1.19
CCDC78-208ENST00000471861 MRPL43Q8N983 215 aaKnown RBP22.5■■□□□ 1.19
CCDC78-208ENST00000471861 NECTIN4Q96NY8 510 aa22.5■■□□□ 1.19
CCDC78-208ENST00000471861 SPG21Q9NZD8 308 aa22.5■■□□□ 1.19
CCDC78-208ENST00000471861 CLK2P49760 499 aaKnown RBP22.49■■□□□ 1.19
CCDC78-208ENST00000471861 NAPAP54920 295 aa22.49■■□□□ 1.19
CCDC78-208ENST00000471861 SMC1AQ14683 1233 aaKnown RBP22.49■■□□□ 1.19
CCDC78-208ENST00000471861 SWSAP1Q6NVH7 229 aa22.49■■□□□ 1.19
CCDC78-208ENST00000471861 KANK3Q6NY19 840 aa22.49■■□□□ 1.19
CCDC78-208ENST00000471861 ECHDC2Q86YB7 292 aa22.49■■□□□ 1.19
CCDC78-208ENST00000471861 LINC01465Q8N7H1 131 aa22.49■■□□□ 1.19
CCDC78-208ENST00000471861 SLC12A7Q9Y666 1083 aa22.49■■□□□ 1.19
CCDC78-208ENST00000471861 DENND4AQ7Z401 1863 aa22.48■■□□□ 1.19
CCDC78-208ENST00000471861 IGLV3-22A0A075B6J6 115 aa22.48■■□□□ 1.19
CCDC78-208ENST00000471861 HOXA2O43364 376 aa22.48■■□□□ 1.19
CCDC78-208ENST00000471861 KRT17Q04695 432 aa22.48■■□□□ 1.19
CCDC78-208ENST00000471861 FUT2Q10981 343 aa22.48■■□□□ 1.19
CCDC78-208ENST00000471861 CWF19L1Q69YN2 538 aaKnown RBP22.48■■□□□ 1.19
CCDC78-208ENST00000471861 ASTLQ6HA08 431 aaPredicted RBP22.48■■□□□ 1.19
CCDC78-208ENST00000471861 CES5AQ6NT32 575 aa22.48■■□□□ 1.19
CCDC78-208ENST00000471861 NIPA1Q7RTP0 329 aa22.48■■□□□ 1.19
CCDC78-208ENST00000471861 FRMD5Q7Z6J6 570 aa22.48■■□□□ 1.19
CCDC78-208ENST00000471861 METTL13Q8N6R0 699 aa22.48■■□□□ 1.19
CCDC78-208ENST00000471861 C12orf76Q8N812 135 aaPredicted RBP22.48■■□□□ 1.19
CCDC78-208ENST00000471861 ADAMTS10Q9H324 1103 aa22.48■■□□□ 1.19
CCDC78-208ENST00000471861 MAFBQ9Y5Q3 323 aaPredicted RBP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms