RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 ZBTB39O15060 712 aa17.07■□□□□ 0.32
SDC3-203ENST00000471567 GAS2O43903 313 aaKnown RBP17.07■□□□□ 0.32
SDC3-203ENST00000471567 ZSCAN22P10073 491 aaPredicted RBP17.07■□□□□ 0.32
SDC3-203ENST00000471567 CCT6AP40227 531 aaKnown RBP17.07■□□□□ 0.32
SDC3-203ENST00000471567 SMAD3P84022 425 aaKnown RBP17.07■□□□□ 0.32
SDC3-203ENST00000471567 TMEM62Q0P6H9 643 aa17.07■□□□□ 0.32
SDC3-203ENST00000471567 LPIN1Q14693 890 aa17.07■□□□□ 0.32
SDC3-203ENST00000471567 KRT79Q5XKE5 535 aa17.07■□□□□ 0.32
SDC3-203ENST00000471567 TSHZ1Q6ZSZ6 1077 aa17.07■□□□□ 0.32
SDC3-203ENST00000471567 LRRC71Q8N4P6 559 aa17.07■□□□□ 0.32
SDC3-203ENST00000471567 SLC7A3Q8WY07 619 aa17.07■□□□□ 0.32
SDC3-203ENST00000471567 CXXC1Q9P0U4 656 aaPredicted RBP17.07■□□□□ 0.32
SDC3-203ENST00000471567 DBR1Q9UK59 544 aaKnown RBP17.07■□□□□ 0.32
SDC3-203ENST00000471567 AKT3Q9Y243 479 aa17.07■□□□□ 0.32
SDC3-203ENST00000471567 SLC4A7Q9Y6M7 1214 aa17.07■□□□□ 0.32
SDC3-203ENST00000471567 GPR32O75388 356 aa17.06■□□□□ 0.32
SDC3-203ENST00000471567 VTNP04004 478 aa17.06■□□□□ 0.32
SDC3-203ENST00000471567 GHRP10912 638 aa17.06■□□□□ 0.32
SDC3-203ENST00000471567 RARRES1P49788 294 aa17.06■□□□□ 0.32
SDC3-203ENST00000471567 FXR1P51114 621 aaKnown RBP eCLIP17.06■□□□□ 0.32
SDC3-203ENST00000471567 CRYBB1P53674 252 aaPredicted RBP17.06■□□□□ 0.32
SDC3-203ENST00000471567 POLGP54098 1239 aaPredicted RBP17.06■□□□□ 0.32
SDC3-203ENST00000471567 MKRN4PQ13434 485 aaPredicted RBP17.06■□□□□ 0.32
SDC3-203ENST00000471567 ZNF579Q8NAF0 562 aaKnown RBP17.06■□□□□ 0.32
SDC3-203ENST00000471567 PHOSPHO2Q8TCD6 241 aa17.06■□□□□ 0.32
SDC3-203ENST00000471567 SNX29Q8TEQ0 813 aa17.06■□□□□ 0.32
SDC3-203ENST00000471567 AK8Q96MA6 479 aa17.06■□□□□ 0.32
SDC3-203ENST00000471567 IFIH1Q9BYX4 1025 aaKnown RBP17.06■□□□□ 0.32
SDC3-203ENST00000471567 OSBPL7Q9BZF2 842 aa17.06■□□□□ 0.32
SDC3-203ENST00000471567 MORC2Q9Y6X9 1032 aaPredicted RBP17.06■□□□□ 0.32
SDC3-203ENST00000471567 VWA3AA6NCI4 1184 aa17.05■□□□□ 0.32
SDC3-203ENST00000471567 SLC26A4O43511 780 aa17.05■□□□□ 0.32
SDC3-203ENST00000471567 DGAT1O75907 488 aa17.05■□□□□ 0.32
SDC3-203ENST00000471567 KCNJ6P48051 423 aa17.05■□□□□ 0.32
SDC3-203ENST00000471567 PTPAQ15257 358 aa17.05■□□□□ 0.32
SDC3-203ENST00000471567 TCTN1Q2MV58 587 aa17.05■□□□□ 0.32
SDC3-203ENST00000471567 ODR4Q5SWX8 454 aa17.05■□□□□ 0.32
SDC3-203ENST00000471567 GPR153Q6NV75 609 aa17.05■□□□□ 0.32
SDC3-203ENST00000471567 FAM173BQ6P4H8 233 aa17.05■□□□□ 0.32
SDC3-203ENST00000471567 KCTD17Q8N5Z5 321 aa17.05■□□□□ 0.32
SDC3-203ENST00000471567 PIGOQ8TEQ8 1089 aa17.05■□□□□ 0.32
SDC3-203ENST00000471567 TCP11Q8WWU5 503 aa17.05■□□□□ 0.32
SDC3-203ENST00000471567 CCDC43Q96MW1 224 aaKnown RBP17.05■□□□□ 0.32
SDC3-203ENST00000471567 ZNF396Q96N95 335 aaPredicted RBP17.05■□□□□ 0.32
SDC3-203ENST00000471567 SLC9A7Q96T83 725 aa17.05■□□□□ 0.32
SDC3-203ENST00000471567 ADAMTS10Q9H324 1103 aa17.05■□□□□ 0.32
SDC3-203ENST00000471567 SUCLA2Q9P2R7 463 aaPredicted RBP17.05■□□□□ 0.32
SDC3-203ENST00000471567 CLIC4Q9Y696 253 aa17.05■□□□□ 0.32
SDC3-203ENST00000471567 SOX1O00570 391 aaPredicted RBP17.04■□□□□ 0.32
SDC3-203ENST00000471567 F13A1P00488 732 aa17.04■□□□□ 0.32
SDC3-203ENST00000471567 LONP1P36776 959 aaKnown RBP17.04■□□□□ 0.32
SDC3-203ENST00000471567 GPC3P51654 580 aa17.04■□□□□ 0.32
SDC3-203ENST00000471567 NLRP11P59045 1033 aaKnown RBP17.04■□□□□ 0.32
SDC3-203ENST00000471567 WDR5P61964 334 aaKnown RBP17.04■□□□□ 0.32
SDC3-203ENST00000471567 DRP2Q13474 957 aa17.04■□□□□ 0.32
SDC3-203ENST00000471567 EMC2Q15006 297 aa17.04■□□□□ 0.32
SDC3-203ENST00000471567 KIZQ2M2Z5 673 aa17.04■□□□□ 0.32
SDC3-203ENST00000471567 POTEGQ6S5H5 508 aa17.04■□□□□ 0.32
SDC3-203ENST00000471567 MMTAG2Q9BU76 263 aaKnown RBP17.04■□□□□ 0.32
SDC3-203ENST00000471567 AGO3Q9H9G7 860 aaKnown RBP17.04■□□□□ 0.32
SDC3-203ENST00000471567 CDHR5Q9HBB8 845 aa17.04■□□□□ 0.32
SDC3-203ENST00000471567 KIAA1024Q9UPX6 916 aa17.04■□□□□ 0.32
SDC3-203ENST00000471567 GINS2Q9Y248 185 aa17.04■□□□□ 0.32
SDC3-203ENST00000471567 PP2D1A8MPX8 630 aa17.03■□□□□ 0.32
SDC3-203ENST00000471567 ASAP2O43150 1006 aa17.03■□□□□ 0.32
SDC3-203ENST00000471567 ATP2A2P16615 1042 aaKnown RBP17.03■□□□□ 0.32
SDC3-203ENST00000471567 CD52P31358 61 aa17.03■□□□□ 0.32
SDC3-203ENST00000471567 SLC39A14Q15043 492 aa17.03■□□□□ 0.32
SDC3-203ENST00000471567 ECM1Q16610 540 aa17.03■□□□□ 0.32
SDC3-203ENST00000471567 HYIQ5T013 277 aa17.03■□□□□ 0.32
SDC3-203ENST00000471567 ZNF410Q86VK4 478 aa17.03■□□□□ 0.32
SDC3-203ENST00000471567 PSPC1Q8WXF1 523 aaKnown RBP17.03■□□□□ 0.32
SDC3-203ENST00000471567 USP28Q96RU2 1077 aa17.03■□□□□ 0.32
SDC3-203ENST00000471567 OSMRQ99650 979 aa17.03■□□□□ 0.32
SDC3-203ENST00000471567 MTRQ99707 1265 aa17.03■□□□□ 0.32
SDC3-203ENST00000471567 FTHL17Q9BXU8 183 aa17.03■□□□□ 0.32
SDC3-203ENST00000471567 ATP6V0A4Q9HBG4 840 aa17.03■□□□□ 0.32
SDC3-203ENST00000471567 PADI3Q9ULW8 664 aa17.03■□□□□ 0.32
SDC3-203ENST00000471567 SIP14410 1827 aa17.03■□□□□ 0.32
SDC3-203ENST00000471567 A0A087WWV3 80 aa17.02■□□□□ 0.32
SDC3-203ENST00000471567 GPR182O15218 404 aa17.02■□□□□ 0.32
SDC3-203ENST00000471567 RPS6KA5O75582 802 aa17.02■□□□□ 0.32
SDC3-203ENST00000471567 EIF4BP23588 611 aaKnown RBP17.02■□□□□ 0.32
SDC3-203ENST00000471567 CDC25AP30304 524 aa17.02■□□□□ 0.32
SDC3-203ENST00000471567 NASPP49321 788 aaPredicted RBP17.02■□□□□ 0.32
SDC3-203ENST00000471567 PAK2Q13177 524 aa17.02■□□□□ 0.32
SDC3-203ENST00000471567 ATL3Q6DD88 541 aa17.02■□□□□ 0.32
SDC3-203ENST00000471567 TMEM40Q8WWA1 233 aa17.02■□□□□ 0.32
SDC3-203ENST00000471567 NLRP7Q8WX94 980 aa17.02■□□□□ 0.32
SDC3-203ENST00000471567 TMEM143Q96AN5 459 aa17.02■□□□□ 0.32
SDC3-203ENST00000471567 LRCH3Q96II8 777 aa17.02■□□□□ 0.32
SDC3-203ENST00000471567 PPP1R16BQ96T49 567 aa17.02■□□□□ 0.32
SDC3-203ENST00000471567 NT5C3AQ9H0P0 336 aa17.02■□□□□ 0.32
SDC3-203ENST00000471567 XPNPEP1Q9NQW7 623 aa17.02■□□□□ 0.32
SDC3-203ENST00000471567 DDX19AQ9NUU7 478 aaKnown RBP17.02■□□□□ 0.32
SDC3-203ENST00000471567 DNM3Q9UQ16 869 aa17.02■□□□□ 0.32
SDC3-203ENST00000471567 NOC2LQ9Y3T9 749 aaKnown RBP17.02■□□□□ 0.32
SDC3-203ENST00000471567 SRPRBQ9Y5M8 271 aaKnown RBP17.02■□□□□ 0.32
SDC3-203ENST00000471567 ARHGEF35A5YM69 484 aa17.01■□□□□ 0.31
SDC3-203ENST00000471567 AMHP03971 560 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms