RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 C11orf84Q9BUA3 381 aaPredicted RBP15.2■□□□□ 0.02
HMGN1-211ENST00000471260 LMAN2LQ9H0V9 348 aa15.2■□□□□ 0.02
HMGN1-211ENST00000471260 RGS18Q9NS28 235 aa15.2■□□□□ 0.02
HMGN1-211ENST00000471260 ST3GAL5Q9UNP4 418 aa15.2■□□□□ 0.02
HMGN1-211ENST00000471260 KCNJ14Q9UNX9 436 aa15.2■□□□□ 0.02
HMGN1-211ENST00000471260 GINS2Q9Y248 185 aa15.2■□□□□ 0.02
HMGN1-211ENST00000471260 RALGAPA2Q2PPJ7 1873 aa15.2■□□□□ 0.02
HMGN1-211ENST00000471260 TTC28Q96AY4 2481 aa15.2■□□□□ 0.02
HMGN1-211ENST00000471260 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.19■□□□□ 0.02
HMGN1-211ENST00000471260 RBAK-RBAKDNI3L0D1 243 aa15.19■□□□□ 0.02
HMGN1-211ENST00000471260 TBX3O15119 743 aa15.19■□□□□ 0.02
HMGN1-211ENST00000471260 CTDNEP1O95476 244 aa15.19■□□□□ 0.02
HMGN1-211ENST00000471260 LINC00271P0C7V0 271 aa15.19■□□□□ 0.02
HMGN1-211ENST00000471260 CTNNB1P35222 781 aa15.19■□□□□ 0.02
HMGN1-211ENST00000471260 SARSP49591 514 aaKnown RBP15.19■□□□□ 0.02
HMGN1-211ENST00000471260 TFF2Q03403 129 aa15.19■□□□□ 0.02
HMGN1-211ENST00000471260 NFKBIBQ15653 356 aa15.19■□□□□ 0.02
HMGN1-211ENST00000471260 KIZQ2M2Z5 673 aa15.19■□□□□ 0.02
HMGN1-211ENST00000471260 XKR3Q5GH77 459 aa15.19■□□□□ 0.02
HMGN1-211ENST00000471260 SLC24A5Q71RS6 500 aa15.19■□□□□ 0.02
HMGN1-211ENST00000471260 TRMT1LQ7Z2T5 733 aaKnown RBP15.19■□□□□ 0.02
HMGN1-211ENST00000471260 TMEM40Q8WWA1 233 aa15.19■□□□□ 0.02
HMGN1-211ENST00000471260 P2RX5Q93086 422 aa15.19■□□□□ 0.02
HMGN1-211ENST00000471260 NIFKQ9BYG3 293 aaKnown RBP15.19■□□□□ 0.02
HMGN1-211ENST00000471260 TMX1Q9H3N1 280 aa15.19■□□□□ 0.02
HMGN1-211ENST00000471260 CDHR5Q9HBB8 845 aa15.19■□□□□ 0.02
HMGN1-211ENST00000471260 ORC3Q9UBD5 711 aaPredicted RBP15.19■□□□□ 0.02
HMGN1-211ENST00000471260 NOC2LQ9Y3T9 749 aaKnown RBP15.19■□□□□ 0.02
HMGN1-211ENST00000471260 PCDHB7Q9Y5E2 793 aa15.19■□□□□ 0.02
HMGN1-211ENST00000471260 WDR81Q562E7 1941 aa15.19■□□□□ 0.02
HMGN1-211ENST00000471260 LOXHD1Q8IVV2 1947 aa15.19■□□□□ 0.02
HMGN1-211ENST00000471260 DENND3A2RUS2 1198 aa15.18■□□□□ 0.02
HMGN1-211ENST00000471260 CHMP2AO43633 222 aa15.18■□□□□ 0.02
HMGN1-211ENST00000471260 NCK2O43639 380 aa15.18■□□□□ 0.02
HMGN1-211ENST00000471260 DKC1O60832 514 aaKnown RBP eCLIP15.18■□□□□ 0.02
HMGN1-211ENST00000471260 VTNP04004 478 aa15.18■□□□□ 0.02
HMGN1-211ENST00000471260 TBC1D8BQ0IIM8 1120 aa15.18■□□□□ 0.02
HMGN1-211ENST00000471260 PPP2R5CQ13362 524 aa15.18■□□□□ 0.02
HMGN1-211ENST00000471260 TARBP2Q15633 366 aaKnown RBP15.18■□□□□ 0.02
HMGN1-211ENST00000471260 ME3Q16798 604 aa15.18■□□□□ 0.02
HMGN1-211ENST00000471260 TMEM266Q2M3C6 531 aa15.18■□□□□ 0.02
HMGN1-211ENST00000471260 LETM2Q2VYF4 491 aa15.18■□□□□ 0.02
HMGN1-211ENST00000471260 BANK1Q8NDB2 785 aa15.18■□□□□ 0.02
HMGN1-211ENST00000471260 GTF3C6Q969F1 213 aa15.18■□□□□ 0.02
HMGN1-211ENST00000471260 OSMRQ99650 979 aa15.18■□□□□ 0.02
HMGN1-211ENST00000471260 BRMS1Q9HCU9 246 aa15.18■□□□□ 0.02
HMGN1-211ENST00000471260 KCNMB3Q9NPA1 279 aa15.18■□□□□ 0.02
HMGN1-211ENST00000471260 LRFN2Q9ULH4 789 aa15.18■□□□□ 0.02
HMGN1-211ENST00000471260 AKT3Q9Y243 479 aa15.18■□□□□ 0.02
HMGN1-211ENST00000471260 NLRC5Q86WI3 1866 aa15.18■□□□□ 0.02
HMGN1-211ENST00000471260 XIRP2A4UGR9 3374 aa15.18■□□□□ 0.02
HMGN1-211ENST00000471260 MUC3AQ02505 3323 aa15.17■□□□□ 0.02
HMGN1-211ENST00000471260 CLCN3P51790 818 aa15.17■□□□□ 0.02
HMGN1-211ENST00000471260 NEK4P51957 841 aa15.17■□□□□ 0.02
HMGN1-211ENST00000471260 NLRP11P59045 1033 aaKnown RBP15.17■□□□□ 0.02
HMGN1-211ENST00000471260 PSMC5P62195 406 aa15.17■□□□□ 0.02
HMGN1-211ENST00000471260 UGCGQ16739 394 aa15.17■□□□□ 0.02
HMGN1-211ENST00000471260 FAM228AQ86W67 206 aa15.17■□□□□ 0.02
HMGN1-211ENST00000471260 GJA10Q969M2 543 aa15.17■□□□□ 0.02
HMGN1-211ENST00000471260 ADAM2Q99965 735 aa15.17■□□□□ 0.02
HMGN1-211ENST00000471260 ADAMTS10Q9H324 1103 aa15.17■□□□□ 0.02
HMGN1-211ENST00000471260 NSUN3Q9H649 340 aaKnown RBP15.17■□□□□ 0.02
HMGN1-211ENST00000471260 ELAC1Q9H777 363 aaKnown RBP15.17■□□□□ 0.02
HMGN1-211ENST00000471260 UBE2ZQ9H832 354 aaPredicted RBP15.17■□□□□ 0.02
HMGN1-211ENST00000471260 C9IYK1 514 aa15.16■□□□□ 0.02
HMGN1-211ENST00000471260 SLC37A4O43826 429 aa15.16■□□□□ 0.02
HMGN1-211ENST00000471260 CCNT1O60563 726 aaKnown RBP15.16■□□□□ 0.02
HMGN1-211ENST00000471260 FDPSP14324 419 aaKnown RBP15.16■□□□□ 0.02
HMGN1-211ENST00000471260 ZSCAN20P17040 1043 aaPredicted RBP15.16■□□□□ 0.02
HMGN1-211ENST00000471260 EIF4BP23588 611 aaKnown RBP15.16■□□□□ 0.02
HMGN1-211ENST00000471260 KRT2P35908 639 aa15.16■□□□□ 0.02
HMGN1-211ENST00000471260 DNM2P50570 870 aa15.16■□□□□ 0.02
HMGN1-211ENST00000471260 GPC3P51654 580 aa15.16■□□□□ 0.02
HMGN1-211ENST00000471260 KCNQ1P51787 676 aa15.16■□□□□ 0.02
HMGN1-211ENST00000471260 FAM189BP81408 668 aa15.16■□□□□ 0.02
HMGN1-211ENST00000471260 PIK3AP1Q6ZUJ8 805 aa15.16■□□□□ 0.02
HMGN1-211ENST00000471260 EXOC8Q8IYI6 725 aa15.16■□□□□ 0.02
HMGN1-211ENST00000471260 SLFN12Q8IYM2 578 aa15.16■□□□□ 0.02
HMGN1-211ENST00000471260 JPH2Q9BR39 696 aaPredicted RBP15.16■□□□□ 0.02
HMGN1-211ENST00000471260 PPME1Q9Y570 386 aa15.16■□□□□ 0.02
HMGN1-211ENST00000471260 NCOR1O75376 2440 aa15.16■□□□□ 0.02
HMGN1-211ENST00000471260 IGKV6-21A0A0C4DH24 114 aa15.15■□□□□ 0.02
HMGN1-211ENST00000471260 MGEA5O60502 916 aa15.15■□□□□ 0.02
HMGN1-211ENST00000471260 STBD1O95210 358 aa15.15■□□□□ 0.02
HMGN1-211ENST00000471260 MMP1P03956 469 aa15.15■□□□□ 0.02
HMGN1-211ENST00000471260 P4HBP07237 508 aaKnown RBP15.15■□□□□ 0.02
HMGN1-211ENST00000471260 QARSP47897 775 aaKnown RBP15.15■□□□□ 0.02
HMGN1-211ENST00000471260 DSC3Q14574 896 aa15.15■□□□□ 0.02
HMGN1-211ENST00000471260 COL19A1Q14993 1142 aa15.15■□□□□ 0.02
HMGN1-211ENST00000471260 PUS10Q3MIT2 529 aaKnown RBP15.15■□□□□ 0.02
HMGN1-211ENST00000471260 LEXMQ3ZCV2 418 aa15.15■□□□□ 0.02
HMGN1-211ENST00000471260 LRRC71Q8N4P6 559 aa15.15■□□□□ 0.02
HMGN1-211ENST00000471260 NSUN7Q8NE18 718 aaKnown RBP15.15■□□□□ 0.02
HMGN1-211ENST00000471260 OXER1Q8TDS5 423 aa15.15■□□□□ 0.02
HMGN1-211ENST00000471260 CEP89Q96ST8 783 aa15.15■□□□□ 0.02
HMGN1-211ENST00000471260 TMEM161AQ9NX61 479 aa15.15■□□□□ 0.02
HMGN1-211ENST00000471260 SEPT9Q9UHD8 586 aaPredicted RBP15.15■□□□□ 0.02
HMGN1-211ENST00000471260 PLAGL2Q9UPG8 496 aa15.15■□□□□ 0.02
HMGN1-211ENST00000471260 MRPL42Q9Y6G3 142 aaKnown RBP15.15■□□□□ 0.02
HMGN1-211ENST00000471260 BRWD1Q9NSI6 2320 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms