RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 TADA3O75528 432 aa7.39□□□□□ -1.23
CKS1B-204ENST00000471245 HPXP02790 462 aa7.39□□□□□ -1.23
CKS1B-204ENST00000471245 NTRK1P04629 796 aa7.39□□□□□ -1.23
CKS1B-204ENST00000471245 CYP17A1P05093 508 aa7.39□□□□□ -1.23
CKS1B-204ENST00000471245 JUNBP17275 347 aaPredicted RBP7.39□□□□□ -1.23
CKS1B-204ENST00000471245 ITGB5P18084 799 aa7.39□□□□□ -1.23
CKS1B-204ENST00000471245 TACR1P25103 407 aa7.39□□□□□ -1.23
CKS1B-204ENST00000471245 KIF11P52732 1056 aa7.39□□□□□ -1.23
CKS1B-204ENST00000471245 HK2P52789 917 aa7.39□□□□□ -1.23
CKS1B-204ENST00000471245 RBM6P78332 1123 aaKnown RBP7.39□□□□□ -1.23
CKS1B-204ENST00000471245 LRRC32Q14392 662 aa7.39□□□□□ -1.23
CKS1B-204ENST00000471245 ABCB5Q2M3G0 1257 aa7.39□□□□□ -1.23
CKS1B-204ENST00000471245 RASSF3Q86WH2 238 aa7.39□□□□□ -1.23
CKS1B-204ENST00000471245 ZZZ3Q8IYH5 903 aa7.39□□□□□ -1.23
CKS1B-204ENST00000471245 LILRA2Q8N149 483 aa7.39□□□□□ -1.23
CKS1B-204ENST00000471245 ZNF610Q8N9Z0 462 aa7.39□□□□□ -1.23
CKS1B-204ENST00000471245 SEC14L1Q92503 715 aa7.39□□□□□ -1.23
CKS1B-204ENST00000471245 TSR2Q969E8 191 aaKnown RBP7.39□□□□□ -1.23
CKS1B-204ENST00000471245 SP110Q9HB58 689 aa7.39□□□□□ -1.23
CKS1B-204ENST00000471245 RC3H2Q9HBD1 1191 aaKnown RBP7.39□□□□□ -1.23
CKS1B-204ENST00000471245 VTA1Q9NP79 307 aa7.39□□□□□ -1.23
CKS1B-204ENST00000471245 KCNH7Q9NS40 1196 aa7.39□□□□□ -1.23
CKS1B-204ENST00000471245 TOMM22Q9NS69 142 aa7.39□□□□□ -1.23
CKS1B-204ENST00000471245 CTNND2Q9UQB3 1225 aa7.39□□□□□ -1.23
CKS1B-204ENST00000471245 A0A1W2PQJ5 194 aa7.38□□□□□ -1.23
CKS1B-204ENST00000471245 FZD9O00144 591 aa7.38□□□□□ -1.23
CKS1B-204ENST00000471245 SCDO00767 359 aa7.38□□□□□ -1.23
CKS1B-204ENST00000471245 KCNK3O14649 394 aa7.38□□□□□ -1.23
CKS1B-204ENST00000471245 SRGAP3O43295 1099 aa7.38□□□□□ -1.23
CKS1B-204ENST00000471245 ABLIM3O94929 683 aa7.38□□□□□ -1.23
CKS1B-204ENST00000471245 SLC9A1P19634 815 aa7.38□□□□□ -1.23
CKS1B-204ENST00000471245 SDHAP31040 664 aa7.38□□□□□ -1.23
CKS1B-204ENST00000471245 IARSP41252 1262 aaKnown RBP7.38□□□□□ -1.23
CKS1B-204ENST00000471245 FNTBP49356 437 aa7.38□□□□□ -1.23
CKS1B-204ENST00000471245 TBX4P57082 545 aa7.38□□□□□ -1.23
CKS1B-204ENST00000471245 BRINP3Q76B58 766 aa7.38□□□□□ -1.23
CKS1B-204ENST00000471245 NLRX1Q86UT6 975 aa7.38□□□□□ -1.23
CKS1B-204ENST00000471245 CHPFQ8IZ52 775 aa7.38□□□□□ -1.23
CKS1B-204ENST00000471245 RTFDC1Q9BY42 306 aaPredicted RBP7.38□□□□□ -1.23
CKS1B-204ENST00000471245 CD244Q9BZW8 370 aa7.38□□□□□ -1.23
CKS1B-204ENST00000471245 C19orf73Q9NVV2 129 aa7.38□□□□□ -1.23
CKS1B-204ENST00000471245 C14orf119Q9NWQ9 140 aa7.38□□□□□ -1.23
CKS1B-204ENST00000471245 MYOTQ9UBF9 498 aa7.38□□□□□ -1.23
CKS1B-204ENST00000471245 MYOM3Q5VTT5 1437 aa7.37□□□□□ -1.23
CKS1B-204ENST00000471245 KANK1Q14678 1352 aa7.37□□□□□ -1.23
CKS1B-204ENST00000471245 RFPL1O75677 317 aa7.37□□□□□ -1.23
CKS1B-204ENST00000471245 CFBP00751 764 aa7.37□□□□□ -1.23
CKS1B-204ENST00000471245 ATF3P18847 181 aa7.37□□□□□ -1.23
CKS1B-204ENST00000471245 CD40P25942 277 aa7.37□□□□□ -1.23
CKS1B-204ENST00000471245 AFMP43652 599 aa7.37□□□□□ -1.23
CKS1B-204ENST00000471245 CYP4F8P98187 520 aa7.37□□□□□ -1.23
CKS1B-204ENST00000471245 SNX17Q15036 470 aa7.37□□□□□ -1.23
CKS1B-204ENST00000471245 PTPN21Q16825 1174 aa7.37□□□□□ -1.23
CKS1B-204ENST00000471245 CPZQ66K79 652 aa7.37□□□□□ -1.23
CKS1B-204ENST00000471245 BICRALQ6AI39 1079 aa7.37□□□□□ -1.23
CKS1B-204ENST00000471245 NXNQ6DKJ4 435 aa7.37□□□□□ -1.23
CKS1B-204ENST00000471245 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.37□□□□□ -1.23
CKS1B-204ENST00000471245 TRIM48Q8IWZ4 208 aa7.37□□□□□ -1.23
CKS1B-204ENST00000471245 FUBP3Q96I24 572 aaKnown RBP eCLIP7.37□□□□□ -1.23
CKS1B-204ENST00000471245 ZDHHC5Q9C0B5 715 aa7.37□□□□□ -1.23
CKS1B-204ENST00000471245 AP5M1Q9H0R1 490 aa7.37□□□□□ -1.23
CKS1B-204ENST00000471245 C19orf44Q9H6X5 657 aa7.37□□□□□ -1.23
CKS1B-204ENST00000471245 ZMAT4Q9H898 229 aa7.37□□□□□ -1.23
CKS1B-204ENST00000471245 TCF7L1Q9HCS4 588 aa7.37□□□□□ -1.23
CKS1B-204ENST00000471245 PRDM7Q9NQW5 492 aa7.37□□□□□ -1.23
CKS1B-204ENST00000471245 USP36Q9P275 1121 aaKnown RBP7.37□□□□□ -1.23
CKS1B-204ENST00000471245 ASH2LQ9UBL3 628 aa7.37□□□□□ -1.23
CKS1B-204ENST00000471245 XRN1Q8IZH2 1706 aaKnown RBP7.37□□□□□ -1.23
CKS1B-204ENST00000471245 MARF1Q9Y4F3 1742 aaKnown RBP7.37□□□□□ -1.23
CKS1B-204ENST00000471245 ADAMTS13Q76LX8 1427 aa7.36□□□□□ -1.23
CKS1B-204ENST00000471245 RIMS2Q9UQ26 1411 aa7.36□□□□□ -1.23
CKS1B-204ENST00000471245 NALCNQ8IZF0 1738 aa7.36□□□□□ -1.23
CKS1B-204ENST00000471245 TRIM75PA6NK02 468 aa7.36□□□□□ -1.23
CKS1B-204ENST00000471245 PRC1O43663 620 aa7.36□□□□□ -1.23
CKS1B-204ENST00000471245 EFEMP2O95967 443 aa7.36□□□□□ -1.23
CKS1B-204ENST00000471245 MYBL2P10244 700 aa7.36□□□□□ -1.23
CKS1B-204ENST00000471245 ARL4AP40617 200 aa7.36□□□□□ -1.23
CKS1B-204ENST00000471245 LRRC41Q15345 812 aa7.36□□□□□ -1.23
CKS1B-204ENST00000471245 EPHA7Q15375 998 aa7.36□□□□□ -1.23
CKS1B-204ENST00000471245 TMEM240Q5SV17 173 aa7.36□□□□□ -1.23
CKS1B-204ENST00000471245 ESRP1Q6NXG1 681 aaKnown RBP7.36□□□□□ -1.23
CKS1B-204ENST00000471245 C1orf162Q8NEQ5 155 aaPredicted RBP7.36□□□□□ -1.23
CKS1B-204ENST00000471245 TTLL11Q8NHH1 800 aa7.36□□□□□ -1.23
CKS1B-204ENST00000471245 TNFRSF12AQ9NP84 129 aa7.36□□□□□ -1.23
CKS1B-204ENST00000471245 LUC7LQ9NQ29 371 aaKnown RBP7.36□□□□□ -1.23
CKS1B-204ENST00000471245 NUDT5Q9UKK9 219 aa7.36□□□□□ -1.23
CKS1B-204ENST00000471245 NOC2LQ9Y3T9 749 aaKnown RBP7.36□□□□□ -1.23
CKS1B-204ENST00000471245 PCDHB4Q9Y5E5 795 aa7.36□□□□□ -1.23
CKS1B-204ENST00000471245 LRP5O75197 1615 aa7.36□□□□□ -1.23
CKS1B-204ENST00000471245 TRPM2O94759 1503 aa7.36□□□□□ -1.23
CKS1B-204ENST00000471245 ABCC5O15440 1437 aa7.35□□□□□ -1.23
CKS1B-204ENST00000471245 DCCP43146 1447 aa7.35□□□□□ -1.23
CKS1B-204ENST00000471245 PNPLA6Q8IY17 1366 aa7.35□□□□□ -1.23
CKS1B-204ENST00000471245 LAMC1P11047 1609 aa7.35□□□□□ -1.23
CKS1B-204ENST00000471245 PTPN23Q9H3S7 1636 aa7.35□□□□□ -1.23
CKS1B-204ENST00000471245 UNC13BO14795 1591 aa7.35□□□□□ -1.23
CKS1B-204ENST00000471245 CCDC194A0A1B0GVG4 234 aa7.35□□□□□ -1.23
CKS1B-204ENST00000471245 SLC27A2O14975 620 aa7.35□□□□□ -1.23
CKS1B-204ENST00000471245 BUB1BO60566 1050 aaPredicted RBP7.35□□□□□ -1.23
CKS1B-204ENST00000471245 MT-CO1P00395 513 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms