RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 CDKAL1Q5VV42 579 aa6.32□□□□□ -1.4
HDAC8-216ENST00000470998 RRAGBQ5VZM2 374 aa6.32□□□□□ -1.4
HDAC8-216ENST00000470998 TMC6Q7Z403 805 aa6.32□□□□□ -1.4
HDAC8-216ENST00000470998 ANKMY2Q8IV38 441 aa6.32□□□□□ -1.4
HDAC8-216ENST00000470998 CNGA4Q8IV77 575 aa6.32□□□□□ -1.4
HDAC8-216ENST00000470998 C1orf216Q8TAB5 229 aa6.32□□□□□ -1.4
HDAC8-216ENST00000470998 ZNF837Q96EG3 531 aaPredicted RBP6.32□□□□□ -1.4
HDAC8-216ENST00000470998 EPSTI1Q96J88 318 aa6.32□□□□□ -1.4
HDAC8-216ENST00000470998 PANX2Q96RD6 677 aa6.32□□□□□ -1.4
HDAC8-216ENST00000470998 P2RX7Q99572 595 aaKnown RBP6.32□□□□□ -1.4
HDAC8-216ENST00000470998 FEZ1Q99689 392 aa6.32□□□□□ -1.4
HDAC8-216ENST00000470998 SRRTQ9BXP5 876 aaKnown RBP6.32□□□□□ -1.4
HDAC8-216ENST00000470998 NT5C3AQ9H0P0 336 aa6.32□□□□□ -1.4
HDAC8-216ENST00000470998 THAP9Q9H5L6 903 aa6.32□□□□□ -1.4
HDAC8-216ENST00000470998 KBTBD4Q9NVX7 518 aa6.32□□□□□ -1.4
HDAC8-216ENST00000470998 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.32□□□□□ -1.4
HDAC8-216ENST00000470998 GJD2Q9UKL4 321 aa6.32□□□□□ -1.4
HDAC8-216ENST00000470998 PYCARDQ9ULZ3 195 aa6.32□□□□□ -1.4
HDAC8-216ENST00000470998 RABGAP1Q9Y3P9 1069 aa6.32□□□□□ -1.4
HDAC8-216ENST00000470998 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.32□□□□□ -1.4
HDAC8-216ENST00000470998 NR2E3Q9Y5X4 410 aa6.32□□□□□ -1.4
HDAC8-216ENST00000470998 PDE4DIPQ5VU43 2346 aa6.32□□□□□ -1.4
HDAC8-216ENST00000470998 PVALEFA0A1B0GWK0 134 aa6.31□□□□□ -1.4
HDAC8-216ENST00000470998 LRRC10BA6NIK2 292 aa6.31□□□□□ -1.4
HDAC8-216ENST00000470998 PLA2G6O60733 806 aa6.31□□□□□ -1.4
HDAC8-216ENST00000470998 FARP2O94887 1054 aaPredicted RBP6.31□□□□□ -1.4
HDAC8-216ENST00000470998 TFRCP02786 760 aaKnown RBP6.31□□□□□ -1.4
HDAC8-216ENST00000470998 RPN1P04843 607 aaKnown RBP6.31□□□□□ -1.4
HDAC8-216ENST00000470998 AKR1B1P15121 316 aa6.31□□□□□ -1.4
HDAC8-216ENST00000470998 BMP6P22004 513 aa6.31□□□□□ -1.4
HDAC8-216ENST00000470998 MSX1P28360 303 aa6.31□□□□□ -1.4
HDAC8-216ENST00000470998 RGS2P41220 211 aa6.31□□□□□ -1.4
HDAC8-216ENST00000470998 USP11P51784 963 aa6.31□□□□□ -1.4
HDAC8-216ENST00000470998 PSMA6P60900 246 aaKnown RBP6.31□□□□□ -1.4
HDAC8-216ENST00000470998 ERVK-24P63145 666 aa6.31□□□□□ -1.4
HDAC8-216ENST00000470998 JAG1P78504 1218 aa6.31□□□□□ -1.4
HDAC8-216ENST00000470998 ICA1Q05084 483 aa6.31□□□□□ -1.4
HDAC8-216ENST00000470998 GRIN1Q05586 938 aa6.31□□□□□ -1.4
HDAC8-216ENST00000470998 PSMD2Q13200 908 aa6.31□□□□□ -1.4
HDAC8-216ENST00000470998 TBX2Q13207 712 aaPredicted RBP6.31□□□□□ -1.4
HDAC8-216ENST00000470998 PTK7Q13308 1070 aa6.31□□□□□ -1.4
HDAC8-216ENST00000470998 PTPN14Q15678 1187 aa6.31□□□□□ -1.4
HDAC8-216ENST00000470998 TPD52L1Q16890 204 aaPredicted RBP6.31□□□□□ -1.4
HDAC8-216ENST00000470998 INF2Q27J81 1249 aa6.31□□□□□ -1.4
HDAC8-216ENST00000470998 CCDC96Q2M329 555 aa6.31□□□□□ -1.4
HDAC8-216ENST00000470998 CCDC144BQ3MJ40 725 aa6.31□□□□□ -1.4
HDAC8-216ENST00000470998 CRTC2Q53ET0 693 aaPredicted RBP6.31□□□□□ -1.4
HDAC8-216ENST00000470998 TBCELQ5QJ74 424 aa6.31□□□□□ -1.4
HDAC8-216ENST00000470998 HAUS3Q68CZ6 603 aa6.31□□□□□ -1.4
HDAC8-216ENST00000470998 CATSPERGQ6ZRH7 1159 aa6.31□□□□□ -1.4
HDAC8-216ENST00000470998 NECAB2Q7Z6G3 386 aa6.31□□□□□ -1.4
HDAC8-216ENST00000470998 CABP7Q86V35 215 aa6.31□□□□□ -1.4
HDAC8-216ENST00000470998 SLFN12Q8IYM2 578 aa6.31□□□□□ -1.4
HDAC8-216ENST00000470998 CCAR2Q8N163 923 aaKnown RBP6.31□□□□□ -1.4
HDAC8-216ENST00000470998 PDILTQ8N807 584 aa6.31□□□□□ -1.4
HDAC8-216ENST00000470998 IGSF22Q8N9C0 903 aa6.31□□□□□ -1.4
HDAC8-216ENST00000470998 RETREG2Q8NC44 543 aa6.31□□□□□ -1.4
HDAC8-216ENST00000470998 TSEN2Q8NCE0 465 aaKnown RBP6.31□□□□□ -1.4
HDAC8-216ENST00000470998 KIF18AQ8NI77 898 aa6.31□□□□□ -1.4
HDAC8-216ENST00000470998 DPF3Q92784 378 aa6.31□□□□□ -1.4
HDAC8-216ENST00000470998 DHTKD1Q96HY7 919 aaPredicted RBP6.31□□□□□ -1.4
HDAC8-216ENST00000470998 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.31□□□□□ -1.4
HDAC8-216ENST00000470998 HSD3B7Q9H2F3 369 aa6.31□□□□□ -1.4
HDAC8-216ENST00000470998 TMX1Q9H3N1 280 aa6.31□□□□□ -1.4
HDAC8-216ENST00000470998 RUBCNLQ9H714 662 aa6.31□□□□□ -1.4
HDAC8-216ENST00000470998 EHMT1Q9H9B1 1298 aa6.31□□□□□ -1.4
HDAC8-216ENST00000470998 NEUROD4Q9HD90 331 aa6.31□□□□□ -1.4
HDAC8-216ENST00000470998 FANCLQ9NW38 375 aa6.31□□□□□ -1.4
HDAC8-216ENST00000470998 HOXC10Q9NYD6 342 aa6.31□□□□□ -1.4
HDAC8-216ENST00000470998 RBPJLQ9UBG7 517 aa6.31□□□□□ -1.4
HDAC8-216ENST00000470998 LIMA1Q9UHB6 759 aaKnown RBP6.31□□□□□ -1.4
HDAC8-216ENST00000470998 PHF24Q9UPV7 400 aa6.31□□□□□ -1.4
HDAC8-216ENST00000470998 KIAA0100Q14667 2235 aaKnown RBP6.31□□□□□ -1.4
HDAC8-216ENST00000470998 PHLPP2Q6ZVD8 1323 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 A0A087X0B3 334 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 A0A1W2PPC1 479 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 A0A1W2PQC6 194 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 hCG_1642624A0A1W2PR95 340 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 SERTM1A2A2V5 107 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 WIPF1O43516 503 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 CCNT1O60563 726 aaKnown RBP6.3□□□□□ -1.4
HDAC8-216ENST00000470998 MSCO60682 206 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 TNNT1P13805 278 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 ELNP15502 786 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 VCAM1P19320 739 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 MUTP22033 750 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 SLC1A4P43007 532 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 TUBB4BP68371 445 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 LRMPQ12912 555 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 TUBB2AQ13885 445 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 LBRQ14739 615 aaKnown RBP6.3□□□□□ -1.4
HDAC8-216ENST00000470998 CALCRLQ16602 461 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 SLC35G1Q2M3R5 365 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 LETM2Q2VYF4 491 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 SPECC1Q5M775 1068 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 HYIQ5T013 277 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 MAP3K21Q5TCX8 1036 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 KRT79Q5XKE5 535 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 CEP135Q66GS9 1140 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 BTNL9Q6UXG8 535 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 179 ms