RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 POLQO75417 2590 aa6.84□□□□□ -1.31
VARS-222ENST00000470953 SDK1Q7Z5N4 2213 aa6.84□□□□□ -1.31
VARS-222ENST00000470953 TTC41PQ6P2S7 1318 aa6.84□□□□□ -1.31
VARS-222ENST00000470953 MINDY4BA8MYZ0 360 aa6.84□□□□□ -1.31
VARS-222ENST00000470953 PLA2G6O60733 806 aa6.84□□□□□ -1.31
VARS-222ENST00000470953 MAGEA9P43362 315 aa6.84□□□□□ -1.31
VARS-222ENST00000470953 ADCY1Q08828 1119 aa6.84□□□□□ -1.31
VARS-222ENST00000470953 AAMPQ13685 434 aa6.84□□□□□ -1.31
VARS-222ENST00000470953 NONOQ15233 471 aaKnown RBP eCLIP6.84□□□□□ -1.31
VARS-222ENST00000470953 PDE12Q6L8Q7 609 aaKnown RBP6.84□□□□□ -1.31
VARS-222ENST00000470953 TMC5Q6UXY8 1006 aa6.84□□□□□ -1.31
VARS-222ENST00000470953 DEFB124Q8NES8 71 aa6.84□□□□□ -1.31
VARS-222ENST00000470953 DNERQ8NFT8 737 aa6.84□□□□□ -1.31
VARS-222ENST00000470953 WHAMMQ8TF30 809 aa6.84□□□□□ -1.31
VARS-222ENST00000470953 TAAR1Q96RJ0 339 aa6.84□□□□□ -1.31
VARS-222ENST00000470953 MYADMQ96S97 322 aa6.84□□□□□ -1.31
VARS-222ENST00000470953 EDEM2Q9BV94 578 aa6.84□□□□□ -1.31
VARS-222ENST00000470953 PUS7LQ9H0K6 701 aaKnown RBP6.84□□□□□ -1.31
VARS-222ENST00000470953 RWDD1Q9H446 243 aaPredicted RBP6.84□□□□□ -1.31
VARS-222ENST00000470953 ENTPD7Q9NQZ7 604 aa6.84□□□□□ -1.31
VARS-222ENST00000470953 SYNPO2Q9UMS6 1093 aa6.84□□□□□ -1.31
VARS-222ENST00000470953 MTMR7Q9Y216 660 aa6.84□□□□□ -1.31
VARS-222ENST00000470953 PAXBP1Q9Y5B6 917 aa6.84□□□□□ -1.31
VARS-222ENST00000470953 PCDHB15Q9Y5E8 787 aa6.84□□□□□ -1.31
VARS-222ENST00000470953 KIAA1217Q5T5P2 1943 aa6.84□□□□□ -1.32
VARS-222ENST00000470953 GSG1L2A8MUP6 293 aa6.83□□□□□ -1.32
VARS-222ENST00000470953 NMT2O60551 498 aa6.83□□□□□ -1.32
VARS-222ENST00000470953 CLASP2O75122 1294 aaKnown RBP6.83□□□□□ -1.32
VARS-222ENST00000470953 CAND2O75155 1236 aa6.83□□□□□ -1.32
VARS-222ENST00000470953 PPFIA4O75335 1185 aa6.83□□□□□ -1.32
VARS-222ENST00000470953 APPP05067 770 aa6.83□□□□□ -1.32
VARS-222ENST00000470953 ZFYP08048 801 aaPredicted RBP6.83□□□□□ -1.32
VARS-222ENST00000470953 GP1BBP13224 206 aa6.83□□□□□ -1.32
VARS-222ENST00000470953 CSRP1P21291 193 aaKnown RBP6.83□□□□□ -1.32
VARS-222ENST00000470953 IBSPP21815 317 aaPredicted RBP6.83□□□□□ -1.32
VARS-222ENST00000470953 TARSP26639 723 aaKnown RBP6.83□□□□□ -1.32
VARS-222ENST00000470953 TDO2P48775 406 aa6.83□□□□□ -1.32
VARS-222ENST00000470953 NRLP54845 237 aa6.83□□□□□ -1.32
VARS-222ENST00000470953 ADAM17P78536 824 aa6.83□□□□□ -1.32
VARS-222ENST00000470953 FGD1P98174 961 aa6.83□□□□□ -1.32
VARS-222ENST00000470953 MGAT3Q09327 533 aa6.83□□□□□ -1.32
VARS-222ENST00000470953 LAMC2Q13753 1193 aa6.83□□□□□ -1.32
VARS-222ENST00000470953 UBE3CQ15386 1083 aa6.83□□□□□ -1.32
VARS-222ENST00000470953 SBK1Q52WX2 424 aa6.83□□□□□ -1.32
VARS-222ENST00000470953 MYSM1Q5VVJ2 828 aa6.83□□□□□ -1.32
VARS-222ENST00000470953 PCSK4Q6UW60 755 aa6.83□□□□□ -1.32
VARS-222ENST00000470953 ZNF444Q8N0Y2 327 aaPredicted RBP6.83□□□□□ -1.32
VARS-222ENST00000470953 CHCHD4Q8N4Q1 142 aa6.83□□□□□ -1.32
VARS-222ENST00000470953 KBTBD3Q8NAB2 608 aa6.83□□□□□ -1.32
VARS-222ENST00000470953 LSM14AQ8ND56 463 aaKnown RBP6.83□□□□□ -1.32
VARS-222ENST00000470953 BBXQ8WY36 941 aaPredicted RBP6.83□□□□□ -1.32
VARS-222ENST00000470953 GPKOWQ92917 476 aaPredicted RBP eCLIP6.83□□□□□ -1.32
VARS-222ENST00000470953 CLDN23Q96B33 292 aa6.83□□□□□ -1.32
VARS-222ENST00000470953 SHDQ96IW2 340 aa6.83□□□□□ -1.32
VARS-222ENST00000470953 KLHL5Q96PQ7 755 aa6.83□□□□□ -1.32
VARS-222ENST00000470953 OSBPL6Q9BZF3 934 aa6.83□□□□□ -1.32
VARS-222ENST00000470953 LTB4R2Q9NPC1 389 aa6.83□□□□□ -1.32
VARS-222ENST00000470953 SLC2A4RGQ9NR83 387 aa6.83□□□□□ -1.32
VARS-222ENST00000470953 ANKMY1Q9P2S6 941 aa6.83□□□□□ -1.32
VARS-222ENST00000470953 ARPP21Q9UBL0 812 aaPredicted RBP6.83□□□□□ -1.32
VARS-222ENST00000470953 TELO2Q9Y4R8 837 aa6.83□□□□□ -1.32
VARS-222ENST00000470953 URB1O60287 2271 aaKnown RBP6.83□□□□□ -1.32
VARS-222ENST00000470953 TRIM6-TRIM34B2RNG4 842 aa6.82□□□□□ -1.32
VARS-222ENST00000470953 CHURC1-FNTBB4DL54 471 aa6.82□□□□□ -1.32
VARS-222ENST00000470953 H3BRB1 525 aa6.82□□□□□ -1.32
VARS-222ENST00000470953 LILRB3O75022 631 aa6.82□□□□□ -1.32
VARS-222ENST00000470953 EPCAMP16422 314 aa6.82□□□□□ -1.32
VARS-222ENST00000470953 CD52P31358 61 aa6.82□□□□□ -1.32
VARS-222ENST00000470953 GBP2P32456 591 aaPredicted RBP6.82□□□□□ -1.32
VARS-222ENST00000470953 PBX3P40426 434 aa6.82□□□□□ -1.32
VARS-222ENST00000470953 FNTBP49356 437 aa6.82□□□□□ -1.32
VARS-222ENST00000470953 IRX6P78412 446 aaPredicted RBP6.82□□□□□ -1.32
VARS-222ENST00000470953 SP2Q02086 613 aa6.82□□□□□ -1.32
VARS-222ENST00000470953 HDAC1Q13547 482 aaPredicted RBP6.82□□□□□ -1.32
VARS-222ENST00000470953 FBXO47Q5MNV8 452 aa6.82□□□□□ -1.32
VARS-222ENST00000470953 PLA2G2CQ5R387 149 aa6.82□□□□□ -1.32
VARS-222ENST00000470953 SYDE2Q5VT97 1194 aa6.82□□□□□ -1.32
VARS-222ENST00000470953 B4GALNT3Q6L9W6 998 aa6.82□□□□□ -1.32
VARS-222ENST00000470953 NPAS4Q8IUM7 802 aa6.82□□□□□ -1.32
VARS-222ENST00000470953 THNSL1Q8IYQ7 743 aa6.82□□□□□ -1.32
VARS-222ENST00000470953 COLGALT1Q8NBJ5 622 aa6.82□□□□□ -1.32
VARS-222ENST00000470953 NEDD1Q8NHV4 660 aa6.82□□□□□ -1.32
VARS-222ENST00000470953 APPBP2Q92624 585 aa6.82□□□□□ -1.32
VARS-222ENST00000470953 ZBTB10Q96DT7 871 aa6.82□□□□□ -1.32
VARS-222ENST00000470953 SPATA33Q96N06 139 aa6.82□□□□□ -1.32
VARS-222ENST00000470953 NACAP1Q9BZK3 213 aa6.82□□□□□ -1.32
VARS-222ENST00000470953 LNPKQ9C0E8 428 aa6.82□□□□□ -1.32
VARS-222ENST00000470953 TUT1Q9H6E5 874 aaKnown RBP6.82□□□□□ -1.32
VARS-222ENST00000470953 EPB41L4AQ9HCS5 686 aaPredicted RBP6.82□□□□□ -1.32
VARS-222ENST00000470953 IL17RBQ9NRM6 502 aa6.82□□□□□ -1.32
VARS-222ENST00000470953 TYW1Q9NV66 732 aaKnown RBP6.82□□□□□ -1.32
VARS-222ENST00000470953 PCDHB12Q9Y5F1 795 aa6.82□□□□□ -1.32
VARS-222ENST00000470953 ATMQ13315 3056 aa6.82□□□□□ -1.32
VARS-222ENST00000470953 COL6A6A6NMZ7 2263 aa6.81□□□□□ -1.32
VARS-222ENST00000470953 SPAARA0A1B0GVQ0 90 aa6.81□□□□□ -1.32
VARS-222ENST00000470953 C2orf71A6NGG8 1288 aa6.81□□□□□ -1.32
VARS-222ENST00000470953 SHISA7A6NL88 538 aa6.81□□□□□ -1.32
VARS-222ENST00000470953 TBKBP1A7MCY6 615 aa6.81□□□□□ -1.32
VARS-222ENST00000470953 CAPN9O14815 690 aa6.81□□□□□ -1.32
VARS-222ENST00000470953 RNF113AO15541 343 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms