RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, human

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-204	ENST00000470837	MYOCD	Q8IZQ8	938 aa		10.8	□□□□□ -0.68
CCM2-204	ENST00000470837	TCP11	Q8WWU5	503 aa		10.8	□□□□□ -0.68
CCM2-204	ENST00000470837	DHTKD1	Q96HY7	919 aa	Predicted RBP	10.8	□□□□□ -0.68
CCM2-204	ENST00000470837	PCYT2	Q99447	389 aa		10.8	□□□□□ -0.68
CCM2-204	ENST00000470837	TSG101	Q99816	390 aa		10.8	□□□□□ -0.68
CCM2-204	ENST00000470837	BPIFA3	Q9BQP9	254 aa		10.8	□□□□□ -0.68
CCM2-204	ENST00000470837	SH2D3A	Q9BRG2	576 aa		10.8	□□□□□ -0.68
CCM2-204	ENST00000470837	C17orf75	Q9HAS0	396 aa		10.8	□□□□□ -0.68
CCM2-204	ENST00000470837	GRPEL1	Q9HAV7	217 aa		10.8	□□□□□ -0.68
CCM2-204	ENST00000470837	CBX8	Q9HC52	389 aa		10.8	□□□□□ -0.68
CCM2-204	ENST00000470837	HMX1	Q9NP08	348 aa	Predicted RBP	10.8	□□□□□ -0.68
CCM2-204	ENST00000470837	XPNPEP3	Q9NQH7	507 aa		10.8	□□□□□ -0.68
CCM2-204	ENST00000470837	TELO2	Q9Y4R8	837 aa		10.8	□□□□□ -0.68
CCM2-204	ENST00000470837	PCDHB13	Q9Y5F0	798 aa		10.8	□□□□□ -0.68
CCM2-204	ENST00000470837	FRMD3	A2A2Y4	597 aa		10.79	□□□□□ -0.68
CCM2-204	ENST00000470837	TMEM150B	A6NC51	233 aa		10.79	□□□□□ -0.68
CCM2-204	ENST00000470837	MAGEB2	O15479	319 aa		10.79	□□□□□ -0.68
CCM2-204	ENST00000470837	GCNT3	O95395	438 aa		10.79	□□□□□ -0.68
CCM2-204	ENST00000470837	FGFR1OP	O95684	399 aa	Known RBP	10.79	□□□□□ -0.68
CCM2-204	ENST00000470837	GNAT1	P11488	350 aa		10.79	□□□□□ -0.68
CCM2-204	ENST00000470837	HOXD8	P13378	290 aa	Predicted RBP	10.79	□□□□□ -0.68
CCM2-204	ENST00000470837	PLS3	P13797	630 aa		10.79	□□□□□ -0.68
CCM2-204	ENST00000470837	ATP4A	P20648	1035 aa		10.79	□□□□□ -0.68
CCM2-204	ENST00000470837	GJA9	P57773	515 aa		10.79	□□□□□ -0.68
CCM2-204	ENST00000470837	PLCB2	Q00722	1185 aa		10.79	□□□□□ -0.68
CCM2-204	ENST00000470837	PPFIA1	Q13136	1202 aa		10.79	□□□□□ -0.68
CCM2-204	ENST00000470837	ALCAM	Q13740	583 aa		10.79	□□□□□ -0.68
CCM2-204	ENST00000470837	UVSSA	Q2YD98	709 aa		10.79	□□□□□ -0.68
CCM2-204	ENST00000470837	RNF180	Q86T96	592 aa		10.79	□□□□□ -0.68
CCM2-204	ENST00000470837	SFR1	Q86XK3	245 aa		10.79	□□□□□ -0.68
CCM2-204	ENST00000470837	SMYD4	Q8IYR2	804 aa	Predicted RBP	10.79	□□□□□ -0.68
CCM2-204	ENST00000470837	AOPEP	Q8N6M6	819 aa		10.79	□□□□□ -0.68
CCM2-204	ENST00000470837	PCSK9	Q8NBP7	692 aa	Known RBP	10.79	□□□□□ -0.68
CCM2-204	ENST00000470837	TRPV1	Q8NER1	839 aa		10.79	□□□□□ -0.68
CCM2-204	ENST00000470837	ANKRD20A12P	Q8NF67	263 aa		10.79	□□□□□ -0.68
CCM2-204	ENST00000470837	NELFB	Q8WX92	580 aa		10.79	□□□□□ -0.68
CCM2-204	ENST00000470837	LENG1	Q96BZ8	264 aa	Predicted RBP	10.79	□□□□□ -0.68
CCM2-204	ENST00000470837	RBSN	Q9H1K0	784 aa		10.79	□□□□□ -0.68
CCM2-204	ENST00000470837	OLFML3	Q9NRN5	406 aa		10.79	□□□□□ -0.68
CCM2-204	ENST00000470837	TBC1D7	Q9P0N9	293 aa		10.79	□□□□□ -0.68
CCM2-204	ENST00000470837	DDX20	Q9UHI6	824 aa	Known RBP	10.79	□□□□□ -0.68
CCM2-204	ENST00000470837	CTNND2	Q9UQB3	1225 aa		10.79	□□□□□ -0.68
CCM2-204	ENST00000470837	MAPK8IP1	Q9UQF2	711 aa		10.79	□□□□□ -0.68
CCM2-204	ENST00000470837	GDA	Q9Y2T3	454 aa		10.79	□□□□□ -0.68
CCM2-204	ENST00000470837	PTCH2	Q9Y6C5	1203 aa		10.79	□□□□□ -0.68
CCM2-204	ENST00000470837	SYNRG	Q9UMZ2	1314 aa		10.79	□□□□□ -0.68
CCM2-204	ENST00000470837	COL1A2	P08123	1366 aa		10.78	□□□□□ -0.68
CCM2-204	ENST00000470837	RRN3P2	A6NIE6	340 aa		10.78	□□□□□ -0.68
CCM2-204	ENST00000470837	CCDC169	A6NNP5	214 aa		10.78	□□□□□ -0.68
CCM2-204	ENST00000470837	SFI1	A8K8P3	1242 aa		10.78	□□□□□ -0.68
CCM2-204	ENST00000470837	RSPH10B2	B2RC85	870 aa		10.78	□□□□□ -0.68
CCM2-204	ENST00000470837		K7ENM7	598 aa		10.78	□□□□□ -0.68
CCM2-204	ENST00000470837	IKBKB	O14920	756 aa		10.78	□□□□□ -0.68
CCM2-204	ENST00000470837	STBD1	O95210	358 aa		10.78	□□□□□ -0.68
CCM2-204	ENST00000470837	RSPH10B	P0C881	870 aa		10.78	□□□□□ -0.68
CCM2-204	ENST00000470837	MAPT	P10636	758 aa	Known RBP	10.78	□□□□□ -0.68
CCM2-204	ENST00000470837	SCP2	P22307	547 aa		10.78	□□□□□ -0.68
CCM2-204	ENST00000470837	PTGS1	P23219	599 aa		10.78	□□□□□ -0.68
CCM2-204	ENST00000470837	CCND3	P30281	292 aa	Predicted RBP	10.78	□□□□□ -0.68
CCM2-204	ENST00000470837	PRCP	P42785	496 aa		10.78	□□□□□ -0.68
CCM2-204	ENST00000470837	ZNF131	P52739	623 aa		10.78	□□□□□ -0.68
CCM2-204	ENST00000470837	IGBP1	P78318	339 aa		10.78	□□□□□ -0.68
CCM2-204	ENST00000470837	BEX3	Q00994	111 aa		10.78	□□□□□ -0.68
CCM2-204	ENST00000470837	STK4	Q13043	487 aa		10.78	□□□□□ -0.68
CCM2-204	ENST00000470837	TRIM32	Q13049	653 aa		10.78	□□□□□ -0.68
CCM2-204	ENST00000470837	MFSD10	Q14728	455 aa		10.78	□□□□□ -0.68
CCM2-204	ENST00000470837	SLC9C1	Q4G0N8	1177 aa		10.78	□□□□□ -0.68
CCM2-204	ENST00000470837	COBLL1	Q53SF7	1204 aa		10.78	□□□□□ -0.68
CCM2-204	ENST00000470837	IER5	Q5VY09	327 aa		10.78	□□□□□ -0.68
CCM2-204	ENST00000470837	LUZP1	Q86V48	1076 aa		10.78	□□□□□ -0.68
CCM2-204	ENST00000470837	ADSSL1	Q8N142	457 aa		10.78	□□□□□ -0.68
CCM2-204	ENST00000470837	GUF1	Q8N442	669 aa	Known RBP	10.78	□□□□□ -0.68
CCM2-204	ENST00000470837	METTL13	Q8N6R0	699 aa		10.78	□□□□□ -0.68
CCM2-204	ENST00000470837	ENOX1	Q8TC92	643 aa	Known RBP	10.78	□□□□□ -0.68
CCM2-204	ENST00000470837	PSPC1	Q8WXF1	523 aa	Known RBP	10.78	□□□□□ -0.68
CCM2-204	ENST00000470837	C16orf70	Q9BSU1	422 aa		10.78	□□□□□ -0.68
CCM2-204	ENST00000470837	MTG1	Q9BT17	334 aa	Predicted RBP	10.78	□□□□□ -0.68
CCM2-204	ENST00000470837	POLR3F	Q9H1D9	316 aa	Predicted RBP	10.78	□□□□□ -0.68
CCM2-204	ENST00000470837	DHX33	Q9H6R0	707 aa	Known RBP	10.78	□□□□□ -0.68
CCM2-204	ENST00000470837	SUGCT	Q9HAC7	445 aa		10.78	□□□□□ -0.68
CCM2-204	ENST00000470837	RWDD2A	Q9UIY3	292 aa		10.78	□□□□□ -0.68
CCM2-204	ENST00000470837	PTPN22	Q9Y2R2	807 aa		10.78	□□□□□ -0.68
CCM2-204	ENST00000470837	PLXNA1	Q9UIW2	1896 aa		10.78	□□□□□ -0.68
CCM2-204	ENST00000470837	LRRC37A2	A6NM11	1700 aa		10.78	□□□□□ -0.68
CCM2-204	ENST00000470837	ZNFX1	Q9P2E3	1918 aa	Known RBP	10.78	□□□□□ -0.68
CCM2-204	ENST00000470837	PPP1R3G	B7ZBB8	358 aa		10.77	□□□□□ -0.69
CCM2-204	ENST00000470837	EIF3D	O15371	548 aa	Known RBP eCLIP	10.77	□□□□□ -0.69
CCM2-204	ENST00000470837	ADCY6	O43306	1168 aa		10.77	□□□□□ -0.69
CCM2-204	ENST00000470837	MAF	O75444	373 aa	Predicted RBP	10.77	□□□□□ -0.69
CCM2-204	ENST00000470837	PGK1	P00558	417 aa		10.77	□□□□□ -0.69
CCM2-204	ENST00000470837	F2	P00734	622 aa		10.77	□□□□□ -0.69
CCM2-204	ENST00000470837	TPM2	P07951	284 aa		10.77	□□□□□ -0.69
CCM2-204	ENST00000470837	INSRR	P14616	1297 aa		10.77	□□□□□ -0.69
CCM2-204	ENST00000470837	CDK11B	P21127	795 aa	Known RBP	10.77	□□□□□ -0.69
CCM2-204	ENST00000470837	BMP6	P22004	513 aa		10.77	□□□□□ -0.69
CCM2-204	ENST00000470837	CTCF	P49711	727 aa	Predicted RBP	10.77	□□□□□ -0.69
CCM2-204	ENST00000470837	PSEN2	P49810	448 aa		10.77	□□□□□ -0.69
CCM2-204	ENST00000470837	PEX3	P56589	373 aa		10.77	□□□□□ -0.69
CCM2-204	ENST00000470837	RTP1	P59025	263 aa		10.77	□□□□□ -0.69
CCM2-204	ENST00000470837	TFDP1	Q14186	410 aa		10.77	□□□□□ -0.69

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