RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 Q9UFV3 132 aa5.6□□□□□ -1.51
BRCA2-202ENST00000470094 CDC42EP3Q9UKI2 254 aa5.6□□□□□ -1.51
BRCA2-202ENST00000470094 MAFO75444 373 aaPredicted RBP5.59□□□□□ -1.51
BRCA2-202ENST00000470094 FKBP9O95302 570 aa5.59□□□□□ -1.51
BRCA2-202ENST00000470094 PLATP00750 562 aa5.59□□□□□ -1.51
BRCA2-202ENST00000470094 ZNF888P0CJ79 500 aaPredicted RBP5.59□□□□□ -1.51
BRCA2-202ENST00000470094 ADCYAP1R1P41586 468 aa5.59□□□□□ -1.51
BRCA2-202ENST00000470094 RRADP55042 308 aa5.59□□□□□ -1.51
BRCA2-202ENST00000470094 DHCR24Q15392 516 aa5.59□□□□□ -1.51
BRCA2-202ENST00000470094 ZMAT1Q5H9K5 638 aa5.59□□□□□ -1.51
BRCA2-202ENST00000470094 CT47A1Q5JQC4 288 aaPredicted RBP5.59□□□□□ -1.51
BRCA2-202ENST00000470094 TMEM200BQ69YZ2 307 aa5.59□□□□□ -1.51
BRCA2-202ENST00000470094 FKBP9P1Q75LS8 142 aa5.59□□□□□ -1.51
BRCA2-202ENST00000470094 RTF1Q92541 710 aaKnown RBP5.59□□□□□ -1.51
BRCA2-202ENST00000470094 ZMAT4Q9H898 229 aa5.59□□□□□ -1.51
BRCA2-202ENST00000470094 JADE2Q9NQC1 790 aa5.59□□□□□ -1.51
BRCA2-202ENST00000470094 SPTLC3Q9NUV7 552 aa5.59□□□□□ -1.51
BRCA2-202ENST00000470094 PRKAB1Q9Y478 270 aa5.59□□□□□ -1.51
BRCA2-202ENST00000470094 TGM5O43548 720 aa5.58□□□□□ -1.52
BRCA2-202ENST00000470094 FOXD2O60548 495 aaPredicted RBP5.58□□□□□ -1.52
BRCA2-202ENST00000470094 LSP1P33241 339 aa5.58□□□□□ -1.52
BRCA2-202ENST00000470094 MEOX1P50221 254 aa5.58□□□□□ -1.52
BRCA2-202ENST00000470094 PPP2CBP62714 309 aa5.58□□□□□ -1.52
BRCA2-202ENST00000470094 PPP2CAP67775 309 aa5.58□□□□□ -1.52
BRCA2-202ENST00000470094 SMAD3P84022 425 aaKnown RBP5.58□□□□□ -1.52
BRCA2-202ENST00000470094 LRRC32Q14392 662 aa5.58□□□□□ -1.52
BRCA2-202ENST00000470094 TBC1D10BQ4KMP7 808 aaPredicted RBP5.58□□□□□ -1.52
BRCA2-202ENST00000470094 RTKN2Q8IZC4 609 aa5.58□□□□□ -1.52
BRCA2-202ENST00000470094 UBR7Q8N806 425 aa5.58□□□□□ -1.52
BRCA2-202ENST00000470094 RPGRQ92834 1020 aaKnown RBP5.58□□□□□ -1.52
BRCA2-202ENST00000470094 TTC1Q99614 292 aa5.58□□□□□ -1.52
BRCA2-202ENST00000470094 TMX1Q9H3N1 280 aa5.58□□□□□ -1.52
BRCA2-202ENST00000470094 IFT22Q9H7X7 185 aa5.58□□□□□ -1.52
BRCA2-202ENST00000470094 PTPN22Q9Y2R2 807 aa5.58□□□□□ -1.52
BRCA2-202ENST00000470094 SLC4A7Q9Y6M7 1214 aa5.58□□□□□ -1.52
BRCA2-202ENST00000470094 MAFGO15525 162 aa5.57□□□□□ -1.52
BRCA2-202ENST00000470094 PRPF6O94906 941 aaKnown RBP5.57□□□□□ -1.52
BRCA2-202ENST00000470094 APOL3O95236 402 aa5.57□□□□□ -1.52
BRCA2-202ENST00000470094 CELA3BP08861 270 aa5.57□□□□□ -1.52
BRCA2-202ENST00000470094 BCAR1P56945 870 aa5.57□□□□□ -1.52
BRCA2-202ENST00000470094 PHC1P78364 1004 aa5.57□□□□□ -1.52
BRCA2-202ENST00000470094 PLP2Q04941 152 aa5.57□□□□□ -1.52
BRCA2-202ENST00000470094 ADCY2Q08462 1091 aa5.57□□□□□ -1.52
BRCA2-202ENST00000470094 STRN3Q13033 797 aa5.57□□□□□ -1.52
BRCA2-202ENST00000470094 MYBPC3Q14896 1274 aa5.57□□□□□ -1.52
BRCA2-202ENST00000470094 NOLC1Q14978 699 aaKnown RBP eCLIP5.57□□□□□ -1.52
BRCA2-202ENST00000470094 ATP13A4Q4VNC1 1196 aa5.57□□□□□ -1.52
BRCA2-202ENST00000470094 GPR158Q5T848 1215 aa5.57□□□□□ -1.52
BRCA2-202ENST00000470094 GLB1LQ6UWU2 654 aa5.57□□□□□ -1.52
BRCA2-202ENST00000470094 FILIP1Q7Z7B0 1213 aa5.57□□□□□ -1.52
BRCA2-202ENST00000470094 POFUT1Q9H488 388 aa5.57□□□□□ -1.52
BRCA2-202ENST00000470094 EMC7Q9NPA0 242 aa5.57□□□□□ -1.52
BRCA2-202ENST00000470094 KCMF1Q9P0J7 381 aa5.57□□□□□ -1.52
BRCA2-202ENST00000470094 USP36Q9P275 1121 aaKnown RBP5.57□□□□□ -1.52
BRCA2-202ENST00000470094 SAE1Q9UBE0 346 aaPredicted RBP5.57□□□□□ -1.52
BRCA2-202ENST00000470094 ZEB2O60315 1214 aa5.56□□□□□ -1.52
BRCA2-202ENST00000470094 RAB11FIP3O75154 756 aa5.56□□□□□ -1.52
BRCA2-202ENST00000470094 CNOT4O95628 575 aaKnown RBP5.56□□□□□ -1.52
BRCA2-202ENST00000470094 BPIP17213 487 aa5.56□□□□□ -1.52
BRCA2-202ENST00000470094 CNGA1P29973 690 aa5.56□□□□□ -1.52
BRCA2-202ENST00000470094 STAT5BP51692 787 aa5.56□□□□□ -1.52
BRCA2-202ENST00000470094 EPHB4P54760 987 aa5.56□□□□□ -1.52
BRCA2-202ENST00000470094 PCOLCEQ15113 449 aa5.56□□□□□ -1.52
BRCA2-202ENST00000470094 TERF2Q15554 542 aa5.56□□□□□ -1.52
BRCA2-202ENST00000470094 DDB1Q16531 1140 aa5.56□□□□□ -1.52
BRCA2-202ENST00000470094 DGKDQ16760 1214 aa5.56□□□□□ -1.52
BRCA2-202ENST00000470094 ZNF827Q17R98 1081 aa5.56□□□□□ -1.52
BRCA2-202ENST00000470094 LCE4AQ5TA78 99 aa5.56□□□□□ -1.52
BRCA2-202ENST00000470094 SLFN13Q68D06 897 aa5.56□□□□□ -1.52
BRCA2-202ENST00000470094 TRIM68Q6AZZ1 485 aa5.56□□□□□ -1.52
BRCA2-202ENST00000470094 KIAA1841Q6NSI8 718 aa5.56□□□□□ -1.52
BRCA2-202ENST00000470094 ESPNLQ6ZVH7 1005 aa5.56□□□□□ -1.52
BRCA2-202ENST00000470094 LARP4Q71RC2 724 aaKnown RBP eCLIP5.56□□□□□ -1.52
BRCA2-202ENST00000470094 ZNF610Q8N9Z0 462 aa5.56□□□□□ -1.52
BRCA2-202ENST00000470094 OR5AN1Q8NGI8 311 aa5.56□□□□□ -1.52
BRCA2-202ENST00000470094 SLC5A5Q92911 643 aa5.56□□□□□ -1.52
BRCA2-202ENST00000470094 MYL10Q9BUA6 226 aa5.56□□□□□ -1.52
BRCA2-202ENST00000470094 KIAA1683Q9H0B3 1180 aa5.56□□□□□ -1.52
BRCA2-202ENST00000470094 SEC61A2Q9H9S3 476 aa5.56□□□□□ -1.52
BRCA2-202ENST00000470094 MSRAQ9UJ68 235 aa5.56□□□□□ -1.52
BRCA2-202ENST00000470094 ST20-MTHFSA0A0A6YYL1 179 aa5.55□□□□□ -1.52
BRCA2-202ENST00000470094 NPEPPSL1A6NEC2 478 aa5.55□□□□□ -1.52
BRCA2-202ENST00000470094 K7ESM1 405 aa5.55□□□□□ -1.52
BRCA2-202ENST00000470094 NEMP1O14524 444 aa5.55□□□□□ -1.52
BRCA2-202ENST00000470094 ITGB3P05106 788 aa5.55□□□□□ -1.52
BRCA2-202ENST00000470094 VIL1P09327 827 aaKnown RBP5.55□□□□□ -1.52
BRCA2-202ENST00000470094 CPEP16870 476 aa5.55□□□□□ -1.52
BRCA2-202ENST00000470094 MRE11P49959 708 aa5.55□□□□□ -1.52
BRCA2-202ENST00000470094 RAC3P60763 192 aa5.55□□□□□ -1.52
BRCA2-202ENST00000470094 AGBL4Q5VU57 503 aa5.55□□□□□ -1.52
BRCA2-202ENST00000470094 BROXQ5VW32 411 aa5.55□□□□□ -1.52
BRCA2-202ENST00000470094 KRT26Q7Z3Y9 468 aa5.55□□□□□ -1.52
BRCA2-202ENST00000470094 STRA8Q7Z7C7 330 aa5.55□□□□□ -1.52
BRCA2-202ENST00000470094 FERMT2Q96AC1 680 aa5.55□□□□□ -1.52
BRCA2-202ENST00000470094 LMF1Q96S06 567 aa5.55□□□□□ -1.52
BRCA2-202ENST00000470094 OR10A2Q9H208 303 aa5.55□□□□□ -1.52
BRCA2-202ENST00000470094 PPP4R1LQ9P1A2 415 aa5.55□□□□□ -1.52
BRCA2-202ENST00000470094 FAM184BQ9ULE4 1060 aa5.55□□□□□ -1.52
BRCA2-202ENST00000470094 APOBEC2Q9Y235 224 aaKnown RBP5.55□□□□□ -1.52
BRCA2-202ENST00000470094 VWA7Q9Y334 891 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms