RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 FSCN1Q16658 493 aaKnown RBP5.54□□□□□ -1.52
VPS8-220ENST00000469713 KIAA1841Q6NSI8 718 aa5.54□□□□□ -1.52
VPS8-220ENST00000469713 SYDE1Q6ZW31 735 aaPredicted RBP5.54□□□□□ -1.52
VPS8-220ENST00000469713 LINC00482Q8N8I6 264 aa5.54□□□□□ -1.52
VPS8-220ENST00000469713 KYQ8NBH2 561 aa5.54□□□□□ -1.52
VPS8-220ENST00000469713 ZBTB8AQ96BR9 441 aa5.54□□□□□ -1.52
VPS8-220ENST00000469713 EAF2Q96CJ1 260 aaPredicted RBP5.54□□□□□ -1.52
VPS8-220ENST00000469713 HOOK2Q96ED9 719 aa5.54□□□□□ -1.52
VPS8-220ENST00000469713 FAXDC2Q96IV6 333 aa5.54□□□□□ -1.52
VPS8-220ENST00000469713 CLIC6Q96NY7 704 aa5.54□□□□□ -1.52
VPS8-220ENST00000469713 ORAI2Q96SN7 254 aa5.54□□□□□ -1.52
VPS8-220ENST00000469713 BTBD2Q9BX70 525 aa5.54□□□□□ -1.52
VPS8-220ENST00000469713 QRSL1Q9H0R6 528 aaKnown RBP5.54□□□□□ -1.52
VPS8-220ENST00000469713 OR10A5Q9H207 317 aa5.54□□□□□ -1.52
VPS8-220ENST00000469713 PRDM12Q9H4Q4 367 aa5.54□□□□□ -1.52
VPS8-220ENST00000469713 KCNG1Q9UIX4 513 aa5.54□□□□□ -1.52
VPS8-220ENST00000469713 CROTQ9UKG9 612 aa5.54□□□□□ -1.52
VPS8-220ENST00000469713 EDARQ9UNE0 448 aa5.54□□□□□ -1.52
VPS8-220ENST00000469713 ST20-MTHFSA0A0A6YYL1 179 aa5.53□□□□□ -1.52
VPS8-220ENST00000469713 TRIM75PA6NK02 468 aa5.53□□□□□ -1.52
VPS8-220ENST00000469713 AKAP10O43572 662 aa5.53□□□□□ -1.52
VPS8-220ENST00000469713 LPLP06858 475 aa5.53□□□□□ -1.52
VPS8-220ENST00000469713 RBP3P10745 1247 aa5.53□□□□□ -1.52
VPS8-220ENST00000469713 APEX1P27695 318 aaKnown RBP5.53□□□□□ -1.52
VPS8-220ENST00000469713 RAB27AP51159 221 aa5.53□□□□□ -1.52
VPS8-220ENST00000469713 SRSF2Q01130 221 aaKnown RBP5.53□□□□□ -1.52
VPS8-220ENST00000469713 SSPNQ14714 243 aa5.53□□□□□ -1.52
VPS8-220ENST00000469713 STILQ15468 1287 aa5.53□□□□□ -1.52
VPS8-220ENST00000469713 CLUL1Q15846 466 aa5.53□□□□□ -1.52
VPS8-220ENST00000469713 UGT8Q16880 541 aa5.53□□□□□ -1.52
VPS8-220ENST00000469713 PITRM1Q5JRX3 1037 aa5.53□□□□□ -1.52
VPS8-220ENST00000469713 TOR2AQ5JU69 321 aa5.53□□□□□ -1.52
VPS8-220ENST00000469713 KANK2Q63ZY3 851 aa5.53□□□□□ -1.52
VPS8-220ENST00000469713 AMOTL1Q8IY63 956 aa5.53□□□□□ -1.52
VPS8-220ENST00000469713 TTLL6Q8N841 843 aa5.53□□□□□ -1.52
VPS8-220ENST00000469713 SIGLEC10Q96LC7 697 aa5.53□□□□□ -1.52
VPS8-220ENST00000469713 EPB41L4AQ9HCS5 686 aaPredicted RBP5.53□□□□□ -1.52
VPS8-220ENST00000469713 KCND1Q9NSA2 647 aa5.53□□□□□ -1.52
VPS8-220ENST00000469713 MKS1Q9NXB0 559 aa5.53□□□□□ -1.52
VPS8-220ENST00000469713 TMPRSS11EQ9UL52 423 aa5.53□□□□□ -1.52
VPS8-220ENST00000469713 IRAK3Q9Y616 596 aa5.53□□□□□ -1.52
VPS8-220ENST00000469713 PMF1-BGLAPU3KQ54 211 aa5.53□□□□□ -1.52
VPS8-220ENST00000469713 PCDHGA12O60330 932 aa5.52□□□□□ -1.53
VPS8-220ENST00000469713 PCDH8O95206 1070 aa5.52□□□□□ -1.53
VPS8-220ENST00000469713 CFBP00751 764 aa5.52□□□□□ -1.53
VPS8-220ENST00000469713 GLDCP23378 1020 aa5.52□□□□□ -1.53
VPS8-220ENST00000469713 CCND1P24385 295 aa5.52□□□□□ -1.53
VPS8-220ENST00000469713 CD83Q01151 205 aa5.52□□□□□ -1.53
VPS8-220ENST00000469713 FZD5Q13467 585 aa5.52□□□□□ -1.53
VPS8-220ENST00000469713 LRRC41Q15345 812 aa5.52□□□□□ -1.53
VPS8-220ENST00000469713 NFE2Q16621 373 aaPredicted RBP5.52□□□□□ -1.53
VPS8-220ENST00000469713 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.52□□□□□ -1.53
VPS8-220ENST00000469713 TTLL7Q6ZT98 887 aa5.52□□□□□ -1.53
VPS8-220ENST00000469713 PNMA8AQ86V59 439 aaPredicted RBP5.52□□□□□ -1.53
VPS8-220ENST00000469713 FAM129CQ86XR2 697 aa5.52□□□□□ -1.53
VPS8-220ENST00000469713 WDR48Q8TAF3 677 aa5.52□□□□□ -1.53
VPS8-220ENST00000469713 RPGRQ92834 1020 aaKnown RBP5.52□□□□□ -1.53
VPS8-220ENST00000469713 WRNIP1Q96S55 665 aa5.52□□□□□ -1.53
VPS8-220ENST00000469713 RTFDC1Q9BY42 306 aaPredicted RBP5.52□□□□□ -1.53
VPS8-220ENST00000469713 SLC13A1Q9BZW2 595 aa5.52□□□□□ -1.53
VPS8-220ENST00000469713 MTG2Q9H4K7 406 aa5.52□□□□□ -1.53
VPS8-220ENST00000469713 DNAJC28Q9NX36 388 aa5.52□□□□□ -1.53
VPS8-220ENST00000469713 CHPF2Q9P2E5 772 aa5.52□□□□□ -1.53
VPS8-220ENST00000469713 TCEAL9Q9UHQ7 104 aa5.52□□□□□ -1.53
VPS8-220ENST00000469713 PCDHGA9Q9Y5G4 932 aaKnown RBP5.52□□□□□ -1.53
VPS8-220ENST00000469713 PCDHGA8Q9Y5G5 932 aa5.52□□□□□ -1.53
VPS8-220ENST00000469713 PCDHGA7Q9Y5G6 932 aa5.52□□□□□ -1.53
VPS8-220ENST00000469713 PCDHGA6Q9Y5G7 932 aa5.52□□□□□ -1.53
VPS8-220ENST00000469713 PCDHGA3Q9Y5H0 932 aa5.52□□□□□ -1.53
VPS8-220ENST00000469713 PCDHGA2Q9Y5H1 932 aa5.52□□□□□ -1.53
VPS8-220ENST00000469713 MYPNQ86TC9 1320 aa5.51□□□□□ -1.53
VPS8-220ENST00000469713 XPOTO43592 962 aaKnown RBP5.51□□□□□ -1.53
VPS8-220ENST00000469713 KRT1P04264 644 aa5.51□□□□□ -1.53
VPS8-220ENST00000469713 PFKMP08237 780 aa5.51□□□□□ -1.53
VPS8-220ENST00000469713 CELA3BP08861 270 aa5.51□□□□□ -1.53
VPS8-220ENST00000469713 COL6A1P12109 1028 aa5.51□□□□□ -1.53
VPS8-220ENST00000469713 PI3P19957 117 aa5.51□□□□□ -1.53
VPS8-220ENST00000469713 ADCY8P40145 1251 aa5.51□□□□□ -1.53
VPS8-220ENST00000469713 MLLT6P55198 1093 aaPredicted RBP5.51□□□□□ -1.53
VPS8-220ENST00000469713 BCAR1P56945 870 aa5.51□□□□□ -1.53
VPS8-220ENST00000469713 HTRA3P83110 453 aa5.51□□□□□ -1.53
VPS8-220ENST00000469713 PIN1Q13526 163 aaPredicted RBP5.51□□□□□ -1.53
VPS8-220ENST00000469713 TRIM25Q14258 630 aaKnown RBP5.51□□□□□ -1.53
VPS8-220ENST00000469713 ODF1Q14990 250 aa5.51□□□□□ -1.53
VPS8-220ENST00000469713 WDR72Q3MJ13 1102 aa5.51□□□□□ -1.53
VPS8-220ENST00000469713 DPP8Q6V1X1 898 aaPredicted RBP5.51□□□□□ -1.53
VPS8-220ENST00000469713 ATG14Q6ZNE5 492 aa5.51□□□□□ -1.53
VPS8-220ENST00000469713 LYSMD2Q8IV50 215 aa5.51□□□□□ -1.53
VPS8-220ENST00000469713 FMNL3Q8IVF7 1028 aa5.51□□□□□ -1.53
VPS8-220ENST00000469713 FNIP1Q8TF40 1166 aa5.51□□□□□ -1.53
VPS8-220ENST00000469713 FAM84AQ96KN4 292 aa5.51□□□□□ -1.53
VPS8-220ENST00000469713 WNT8AQ9H1J5 351 aa5.51□□□□□ -1.53
VPS8-220ENST00000469713 KCTD10Q9H3F6 313 aa5.51□□□□□ -1.53
VPS8-220ENST00000469713 SPATA6Q9NWH7 488 aaPredicted RBP5.51□□□□□ -1.53
VPS8-220ENST00000469713 ZIM2Q9NZV7 527 aa5.51□□□□□ -1.53
VPS8-220ENST00000469713 MAGEL2Q9UJ55 1249 aa5.51□□□□□ -1.53
VPS8-220ENST00000469713 DENND2AQ9ULE3 1009 aa5.51□□□□□ -1.53
VPS8-220ENST00000469713 LUC7L2Q9Y383 392 aaKnown RBP5.51□□□□□ -1.53
VPS8-220ENST00000469713 RNF114Q9Y508 228 aa5.51□□□□□ -1.53
VPS8-220ENST00000469713 NUMBLQ9Y6R0 609 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms