RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 SMRP1Q8NCR6 262 aa13.92□□□□□ -0.18
HDAC3-204ENST00000469207 ZMYND12Q9H0C1 365 aa13.92□□□□□ -0.18
HDAC3-204ENST00000469207 USP15Q9Y4E8 981 aaPredicted RBP13.92□□□□□ -0.18
HDAC3-204ENST00000469207 PCDHB12Q9Y5F1 795 aa13.92□□□□□ -0.18
HDAC3-204ENST00000469207 FNDC1Q4ZHG4 1894 aaPredicted RBP13.92□□□□□ -0.18
HDAC3-204ENST00000469207 hCG_1984214I3L0E3 225 aa13.91□□□□□ -0.18
HDAC3-204ENST00000469207 GPR182O15218 404 aa13.91□□□□□ -0.18
HDAC3-204ENST00000469207 CSDE1O75534 798 aaKnown RBP13.91□□□□□ -0.18
HDAC3-204ENST00000469207 FGFR4P22455 802 aa13.91□□□□□ -0.18
HDAC3-204ENST00000469207 CRYBB1P53674 252 aaPredicted RBP13.91□□□□□ -0.18
HDAC3-204ENST00000469207 FGD1P98174 961 aa13.91□□□□□ -0.18
HDAC3-204ENST00000469207 COASYQ13057 564 aa13.91□□□□□ -0.18
HDAC3-204ENST00000469207 IER5LQ5T953 404 aa13.91□□□□□ -0.18
HDAC3-204ENST00000469207 EFCAB12Q6NXP0 572 aa13.91□□□□□ -0.18
HDAC3-204ENST00000469207 THNSL1Q8IYQ7 743 aa13.91□□□□□ -0.18
HDAC3-204ENST00000469207 ZNF713Q8N859 430 aaPredicted RBP13.91□□□□□ -0.18
HDAC3-204ENST00000469207 COLGALT1Q8NBJ5 622 aa13.91□□□□□ -0.18
HDAC3-204ENST00000469207 BBXQ8WY36 941 aaPredicted RBP13.91□□□□□ -0.18
HDAC3-204ENST00000469207 EDAQ92838 391 aa13.91□□□□□ -0.18
HDAC3-204ENST00000469207 BRF1Q92994 677 aa13.91□□□□□ -0.18
HDAC3-204ENST00000469207 PPP2R3CQ969Q6 453 aa13.91□□□□□ -0.18
HDAC3-204ENST00000469207 LENG9Q96B70 501 aa13.91□□□□□ -0.18
HDAC3-204ENST00000469207 RPGRIP1Q96KN7 1286 aa13.91□□□□□ -0.18
HDAC3-204ENST00000469207 CASD1Q96PB1 797 aa13.91□□□□□ -0.18
HDAC3-204ENST00000469207 RNF19AQ9NV58 838 aa13.91□□□□□ -0.18
HDAC3-204ENST00000469207 CDH22Q9UJ99 828 aa13.91□□□□□ -0.18
HDAC3-204ENST00000469207 SAMM50Q9Y512 469 aa13.91□□□□□ -0.18
HDAC3-204ENST00000469207 PCDHA10Q9Y5I2 948 aa13.91□□□□□ -0.18
HDAC3-204ENST00000469207 LOC730098B7Z3J9 87 aa13.9□□□□□ -0.18
HDAC3-204ENST00000469207 PRPF3O43395 683 aaKnown RBP13.9□□□□□ -0.18
HDAC3-204ENST00000469207 ZNF862O60290 1169 aa13.9□□□□□ -0.18
HDAC3-204ENST00000469207 PSAPP07602 524 aa13.9□□□□□ -0.18
HDAC3-204ENST00000469207 NHLH1Q02575 133 aa13.9□□□□□ -0.18
HDAC3-204ENST00000469207 PLPP4Q5VZY2 271 aa13.9□□□□□ -0.18
HDAC3-204ENST00000469207 ZNF746Q6NUN9 644 aaPredicted RBP13.9□□□□□ -0.18
HDAC3-204ENST00000469207 JAKMIP1Q96N16 626 aaKnown RBP13.9□□□□□ -0.18
HDAC3-204ENST00000469207 PHOX2BQ99453 314 aa13.9□□□□□ -0.18
HDAC3-204ENST00000469207 POP1Q99575 1024 aaKnown RBP13.9□□□□□ -0.18
HDAC3-204ENST00000469207 SH2D3AQ9BRG2 576 aa13.9□□□□□ -0.18
HDAC3-204ENST00000469207 GLT8D2Q9H1C3 349 aa13.9□□□□□ -0.18
HDAC3-204ENST00000469207 ADAMTS10Q9H324 1103 aa13.9□□□□□ -0.18
HDAC3-204ENST00000469207 ATP6V0A4Q9HBG4 840 aa13.9□□□□□ -0.18
HDAC3-204ENST00000469207 C6orf50Q9HD87 102 aa13.9□□□□□ -0.18
HDAC3-204ENST00000469207 TLR9Q9NR96 1032 aa13.9□□□□□ -0.18
HDAC3-204ENST00000469207 C1orf112Q9NSG2 853 aa13.9□□□□□ -0.18
HDAC3-204ENST00000469207 TBC1D22BQ9NU19 505 aa13.9□□□□□ -0.18
HDAC3-204ENST00000469207 AKT3Q9Y243 479 aa13.9□□□□□ -0.18
HDAC3-204ENST00000469207 COL1A2P08123 1366 aa13.9□□□□□ -0.18
HDAC3-204ENST00000469207 TECTAO75443 2155 aa13.89□□□□□ -0.19
HDAC3-204ENST00000469207 HIDE1A8MVS5 230 aa13.89□□□□□ -0.19
HDAC3-204ENST00000469207 FSCN2O14926 492 aa13.89□□□□□ -0.19
HDAC3-204ENST00000469207 MSH4O15457 936 aa13.89□□□□□ -0.19
HDAC3-204ENST00000469207 SP100P23497 879 aaPredicted RBP13.89□□□□□ -0.19
HDAC3-204ENST00000469207 MRE11P49959 708 aa13.89□□□□□ -0.19
HDAC3-204ENST00000469207 CCT2P78371 535 aaKnown RBP13.89□□□□□ -0.19
HDAC3-204ENST00000469207 NTRK3Q16288 839 aa13.89□□□□□ -0.19
HDAC3-204ENST00000469207 UGCGQ16739 394 aa13.89□□□□□ -0.19
HDAC3-204ENST00000469207 DUSP6Q16828 381 aa13.89□□□□□ -0.19
HDAC3-204ENST00000469207 LLGL2Q6P1M3 1020 aa13.89□□□□□ -0.19
HDAC3-204ENST00000469207 REXO1Q8N1G1 1221 aaKnown RBP13.89□□□□□ -0.19
HDAC3-204ENST00000469207 LINC01465Q8N7H1 131 aa13.89□□□□□ -0.19
HDAC3-204ENST00000469207 RNF169Q8NCN4 708 aa13.89□□□□□ -0.19
HDAC3-204ENST00000469207 NCOA5Q9HCD5 579 aaKnown RBP13.89□□□□□ -0.19
HDAC3-204ENST00000469207 AAASQ9NRG9 546 aa13.89□□□□□ -0.19
HDAC3-204ENST00000469207 TMEM161AQ9NX61 479 aa13.89□□□□□ -0.19
HDAC3-204ENST00000469207 VPS54Q9P1Q0 977 aa13.89□□□□□ -0.19
HDAC3-204ENST00000469207 SNX14Q9Y5W7 946 aa13.89□□□□□ -0.19
HDAC3-204ENST00000469207 ESYT2A0FGR8 921 aa13.88□□□□□ -0.19
HDAC3-204ENST00000469207 TMEM150BA6NC51 233 aa13.88□□□□□ -0.19
HDAC3-204ENST00000469207 CHMP2AO43633 222 aa13.88□□□□□ -0.19
HDAC3-204ENST00000469207 CDC45O75419 566 aa13.88□□□□□ -0.19
HDAC3-204ENST00000469207 CIITAP33076 1130 aa13.88□□□□□ -0.19
HDAC3-204ENST00000469207 DRP2Q13474 957 aa13.88□□□□□ -0.19
HDAC3-204ENST00000469207 KRT32Q14532 448 aa13.88□□□□□ -0.19
HDAC3-204ENST00000469207 TRIM67Q6ZTA4 783 aa13.88□□□□□ -0.19
HDAC3-204ENST00000469207 TEX2Q8IWB9 1127 aa13.88□□□□□ -0.19
HDAC3-204ENST00000469207 KCNB2Q92953 911 aa13.88□□□□□ -0.19
HDAC3-204ENST00000469207 PBXIP1Q96AQ6 731 aa13.88□□□□□ -0.19
HDAC3-204ENST00000469207 TCF25Q9BQ70 676 aa13.88□□□□□ -0.19
HDAC3-204ENST00000469207 LARP6Q9BRS8 491 aaKnown RBP13.88□□□□□ -0.19
HDAC3-204ENST00000469207 SLC26A6Q9BXS9 759 aa13.88□□□□□ -0.19
HDAC3-204ENST00000469207 S1PR5Q9H228 398 aa13.88□□□□□ -0.19
HDAC3-204ENST00000469207 ELAC1Q9H777 363 aaKnown RBP13.88□□□□□ -0.19
HDAC3-204ENST00000469207 DISC1Q9NRI5 854 aa13.88□□□□□ -0.19
HDAC3-204ENST00000469207 MYH9P35579 1960 aaKnown RBP13.87□□□□□ -0.19
HDAC3-204ENST00000469207 TMEM221A6NGB7 291 aa13.87□□□□□ -0.19
HDAC3-204ENST00000469207 NT5C1B-RDH14C9J2C7 533 aa13.87□□□□□ -0.19
HDAC3-204ENST00000469207 M0R296 226 aa13.87□□□□□ -0.19
HDAC3-204ENST00000469207 HMGB1P09429 215 aaKnown RBP13.87□□□□□ -0.19
HDAC3-204ENST00000469207 EIF4BP23588 611 aaKnown RBP13.87□□□□□ -0.19
HDAC3-204ENST00000469207 TECP42680 631 aa13.87□□□□□ -0.19
HDAC3-204ENST00000469207 RCAN1P53805 252 aa13.87□□□□□ -0.19
HDAC3-204ENST00000469207 ZXDAP98168 799 aa13.87□□□□□ -0.19
HDAC3-204ENST00000469207 UBE3AQ05086 875 aa13.87□□□□□ -0.19
HDAC3-204ENST00000469207 KCNC3Q14003 757 aa13.87□□□□□ -0.19
HDAC3-204ENST00000469207 CBX2Q14781 532 aaPredicted RBP13.87□□□□□ -0.19
HDAC3-204ENST00000469207 LONRF3Q496Y0 759 aa13.87□□□□□ -0.19
HDAC3-204ENST00000469207 CLLU1OSQ5K130 101 aa13.87□□□□□ -0.19
HDAC3-204ENST00000469207 ODR4Q5SWX8 454 aa13.87□□□□□ -0.19
HDAC3-204ENST00000469207 SYCE2Q6PIF2 218 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms