RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 PASD1Q8IV76 773 aa7.62□□□□□ -1.19
XRN1-207ENST00000468894 LGI4Q8N135 537 aa7.62□□□□□ -1.19
XRN1-207ENST00000468894 BCL6BQ8N143 479 aaPredicted RBP7.62□□□□□ -1.19
XRN1-207ENST00000468894 TUBGCP5Q96RT8 1024 aa7.62□□□□□ -1.19
XRN1-207ENST00000468894 SEMA4AQ9H3S1 761 aa7.62□□□□□ -1.19
XRN1-207ENST00000468894 POFUT1Q9H488 388 aa7.62□□□□□ -1.19
XRN1-207ENST00000468894 IFT22Q9H7X7 185 aa7.62□□□□□ -1.19
XRN1-207ENST00000468894 CDC42EP3Q9UKI2 254 aa7.62□□□□□ -1.19
XRN1-207ENST00000468894 INVSQ9Y283 1065 aa7.62□□□□□ -1.19
XRN1-207ENST00000468894 ZDHHC9Q9Y397 364 aa7.62□□□□□ -1.19
XRN1-207ENST00000468894 A0A0G2JNJ9 132 aa7.61□□□□□ -1.19
XRN1-207ENST00000468894 POU3F3P20264 500 aaPredicted RBP7.61□□□□□ -1.19
XRN1-207ENST00000468894 EIF4HQ15056 248 aaKnown RBP7.61□□□□□ -1.19
XRN1-207ENST00000468894 ATP13A4Q4VNC1 1196 aa7.61□□□□□ -1.19
XRN1-207ENST00000468894 CT47A1Q5JQC4 288 aaPredicted RBP7.61□□□□□ -1.19
XRN1-207ENST00000468894 ZFYVE27Q5T4F4 411 aa7.61□□□□□ -1.19
XRN1-207ENST00000468894 LCE4AQ5TA78 99 aa7.61□□□□□ -1.19
XRN1-207ENST00000468894 IFNL2Q8IZJ0 200 aa7.61□□□□□ -1.19
XRN1-207ENST00000468894 OR5AN1Q8NGI8 311 aa7.61□□□□□ -1.19
XRN1-207ENST00000468894 SLC5A5Q92911 643 aa7.61□□□□□ -1.19
XRN1-207ENST00000468894 SCYL1Q96KG9 808 aa7.61□□□□□ -1.19
XRN1-207ENST00000468894 TTC1Q99614 292 aa7.61□□□□□ -1.19
XRN1-207ENST00000468894 MYL10Q9BUA6 226 aa7.61□□□□□ -1.19
XRN1-207ENST00000468894 Q9UFV3 132 aa7.61□□□□□ -1.19
XRN1-207ENST00000468894 APOBEC2Q9Y235 224 aaKnown RBP7.61□□□□□ -1.19
XRN1-207ENST00000468894 EYA4O95677 639 aa7.6□□□□□ -1.19
XRN1-207ENST00000468894 HMGCRP04035 888 aa7.6□□□□□ -1.19
XRN1-207ENST00000468894 CNGA1P29973 690 aa7.6□□□□□ -1.19
XRN1-207ENST00000468894 USP10Q14694 798 aaKnown RBP7.6□□□□□ -1.19
XRN1-207ENST00000468894 NOLC1Q14978 699 aaKnown RBP eCLIP7.6□□□□□ -1.19
XRN1-207ENST00000468894 ZNF827Q17R98 1081 aa7.6□□□□□ -1.19
XRN1-207ENST00000468894 LARP4Q71RC2 724 aaKnown RBP eCLIP7.6□□□□□ -1.19
XRN1-207ENST00000468894 KANSL1Q7Z3B3 1105 aa7.6□□□□□ -1.19
XRN1-207ENST00000468894 ZNF610Q8N9Z0 462 aa7.6□□□□□ -1.19
XRN1-207ENST00000468894 CARD11Q9BXL7 1154 aa7.6□□□□□ -1.19
XRN1-207ENST00000468894 TMX1Q9H3N1 280 aa7.6□□□□□ -1.19
XRN1-207ENST00000468894 MSRAQ9UJ68 235 aa7.6□□□□□ -1.19
XRN1-207ENST00000468894 ELL2O00472 640 aaPredicted RBP7.59□□□□□ -1.19
XRN1-207ENST00000468894 ZEB2O60315 1214 aa7.59□□□□□ -1.19
XRN1-207ENST00000468894 PRPF6O94906 941 aaKnown RBP7.59□□□□□ -1.19
XRN1-207ENST00000468894 LSP1P33241 339 aa7.59□□□□□ -1.19
XRN1-207ENST00000468894 STAT5BP51692 787 aa7.59□□□□□ -1.19
XRN1-207ENST00000468894 RRADP55042 308 aa7.59□□□□□ -1.19
XRN1-207ENST00000468894 CTSWP56202 376 aa7.59□□□□□ -1.19
XRN1-207ENST00000468894 MAP3K12Q12852 859 aa7.59□□□□□ -1.19
XRN1-207ENST00000468894 NFIXQ14938 502 aa7.59□□□□□ -1.19
XRN1-207ENST00000468894 DDB1Q16531 1140 aa7.59□□□□□ -1.19
XRN1-207ENST00000468894 ZBTB41Q5SVQ8 909 aa7.59□□□□□ -1.19
XRN1-207ENST00000468894 UBXN11Q5T124 520 aa7.59□□□□□ -1.19
XRN1-207ENST00000468894 BROXQ5VW32 411 aa7.59□□□□□ -1.19
XRN1-207ENST00000468894 PLEKHH3Q7Z736 793 aa7.59□□□□□ -1.19
XRN1-207ENST00000468894 FILIP1Q7Z7B0 1213 aa7.59□□□□□ -1.19
XRN1-207ENST00000468894 ZNF496Q96IT1 587 aaPredicted RBP7.59□□□□□ -1.19
XRN1-207ENST00000468894 KIAA1683Q9H0B3 1180 aa7.59□□□□□ -1.19
XRN1-207ENST00000468894 SPC25Q9HBM1 224 aa7.59□□□□□ -1.19
XRN1-207ENST00000468894 USP36Q9P275 1121 aaKnown RBP7.59□□□□□ -1.19
XRN1-207ENST00000468894 DNAJC6O75061 913 aa7.58□□□□□ -1.2
XRN1-207ENST00000468894 ADCY2Q08462 1091 aa7.58□□□□□ -1.2
XRN1-207ENST00000468894 STAT4Q14765 748 aa7.58□□□□□ -1.2
XRN1-207ENST00000468894 TRIM68Q6AZZ1 485 aa7.58□□□□□ -1.2
XRN1-207ENST00000468894 KIAA1841Q6NSI8 718 aa7.58□□□□□ -1.2
XRN1-207ENST00000468894 UNQ6494/PRO21346Q6UXR6 183 aa7.58□□□□□ -1.2
XRN1-207ENST00000468894 LHFPL2Q6ZUX7 228 aa7.58□□□□□ -1.2
XRN1-207ENST00000468894 SLC4A7Q9Y6M7 1214 aa7.58□□□□□ -1.2
XRN1-207ENST00000468894 KDM1AO60341 852 aa7.57□□□□□ -1.2
XRN1-207ENST00000468894 B4GALT4O60513 344 aa7.57□□□□□ -1.2
XRN1-207ENST00000468894 APOL3O95236 402 aa7.57□□□□□ -1.2
XRN1-207ENST00000468894 CNOT4O95628 575 aaKnown RBP7.57□□□□□ -1.2
XRN1-207ENST00000468894 ANTXR2P58335 489 aa7.57□□□□□ -1.2
XRN1-207ENST00000468894 NFKB2Q00653 900 aa7.57□□□□□ -1.2
XRN1-207ENST00000468894 PCOLCEQ15113 449 aa7.57□□□□□ -1.2
XRN1-207ENST00000468894 TBC1D10BQ4KMP7 808 aaPredicted RBP7.57□□□□□ -1.2
XRN1-207ENST00000468894 TIGD7Q6NT04 549 aaPredicted RBP7.57□□□□□ -1.2
XRN1-207ENST00000468894 CLRN3Q8NCR9 226 aa7.57□□□□□ -1.2
XRN1-207ENST00000468894 PITHD1Q9GZP4 211 aaPredicted RBP7.57□□□□□ -1.2
XRN1-207ENST00000468894 HAPLN2Q9GZV7 340 aa7.57□□□□□ -1.2
XRN1-207ENST00000468894 KCMF1Q9P0J7 381 aa7.57□□□□□ -1.2
XRN1-207ENST00000468894 MAGEL2Q9UJ55 1249 aa7.57□□□□□ -1.2
XRN1-207ENST00000468894 LAMTOR5O43504 91 aa7.56□□□□□ -1.2
XRN1-207ENST00000468894 BRINP1O60477 761 aa7.56□□□□□ -1.2
XRN1-207ENST00000468894 PLATP00750 562 aa7.56□□□□□ -1.2
XRN1-207ENST00000468894 EPHB4P54760 987 aa7.56□□□□□ -1.2
XRN1-207ENST00000468894 BCAR1P56945 870 aa7.56□□□□□ -1.2
XRN1-207ENST00000468894 TBR1Q16650 682 aa7.56□□□□□ -1.2
XRN1-207ENST00000468894 RNF187Q5TA31 235 aaPredicted RBP7.56□□□□□ -1.2
XRN1-207ENST00000468894 AGBL4Q5VU57 503 aa7.56□□□□□ -1.2
XRN1-207ENST00000468894 HDGFL2Q7Z4V5 671 aaPredicted RBP7.56□□□□□ -1.2
XRN1-207ENST00000468894 CXorf67Q86X51 503 aaPredicted RBP7.56□□□□□ -1.2
XRN1-207ENST00000468894 RPGRQ92834 1020 aaKnown RBP7.56□□□□□ -1.2
XRN1-207ENST00000468894 MEGF9Q9H1U4 602 aa7.56□□□□□ -1.2
XRN1-207ENST00000468894 MTG2Q9H4K7 406 aa7.56□□□□□ -1.2
XRN1-207ENST00000468894 PPP2R3BQ9Y5P8 575 aa7.56□□□□□ -1.2
XRN1-207ENST00000468894 MRE11P49959 708 aa7.55□□□□□ -1.2
XRN1-207ENST00000468894 DGKDQ16760 1214 aa7.55□□□□□ -1.2
XRN1-207ENST00000468894 RNF151Q2KHN1 245 aa7.55□□□□□ -1.2
XRN1-207ENST00000468894 ZMAT1Q5H9K5 638 aa7.55□□□□□ -1.2
XRN1-207ENST00000468894 ARHGEF18Q6ZSZ5 1173 aa7.55□□□□□ -1.2
XRN1-207ENST00000468894 ESPNLQ6ZVH7 1005 aa7.55□□□□□ -1.2
XRN1-207ENST00000468894 BMP8AQ7Z5Y6 402 aa7.55□□□□□ -1.2
XRN1-207ENST00000468894 RTKN2Q8IZC4 609 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms