RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 JPH1Q9HDC5 661 aaPredicted RBP10.53□□□□□ -0.72
APOBEC1-202ENST00000467171 PKD2L1Q9P0L9 805 aa10.53□□□□□ -0.72
APOBEC1-202ENST00000467171 DNAJC25-GNG10A0A024R161 153 aa10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 GRXCR2A6NFK2 248 aa10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 RSPH10B2B2RC85 870 aa10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 TRAF5O00463 557 aa10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 ZBTB39O15060 712 aa10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 CETN3O15182 167 aa10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 ATG7O95352 703 aa10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 TUBB4AP04350 444 aa10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 GYPCP04921 128 aa10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 PSAPP07602 524 aa10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 RSPH10BP0C881 870 aa10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 TGFB3P10600 412 aa10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 YWHABP31946 246 aaKnown RBP10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 MTIF2P46199 727 aaKnown RBP10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 CASP5P51878 434 aa10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 GTF2A2P52657 109 aa10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 TERF1P54274 439 aa10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 PPP2R3AQ06190 1150 aa10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 RBL2Q08999 1139 aa10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 RAD51AP2Q09MP3 1159 aa10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 TBC1D8BQ0IIM8 1120 aa10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 VWA3BQ502W6 1294 aa10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 MIIPQ5JXC2 388 aa10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 FKBP15Q5T1M5 1219 aa10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 MAP1SQ66K74 1059 aaPredicted RBP10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 E4F1Q66K89 784 aaPredicted RBP10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 MIS18BP1Q6P0N0 1132 aa10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 ABHD15Q6UXT9 468 aa10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 ZNF720Q7Z2F6 126 aa10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 ANKRD23Q86SG2 305 aa10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 CCAR2Q8N163 923 aaKnown RBP10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 MYCT1Q8N699 235 aa10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 SLC17A8Q8NDX2 589 aa10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 GOLGA5Q8TBA6 731 aa10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 MORC4Q8TE76 937 aa10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 STRA6Q9BX79 667 aa10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 ST6GALNAC4Q9H4F1 302 aa10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 ZHX3Q9H4I2 956 aa10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 MRPL44Q9H9J2 332 aaKnown RBP10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 TXNRD2Q9NNW7 524 aa10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 TYW1Q9NV66 732 aaKnown RBP10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 TBC1D7Q9P0N9 293 aa10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 SLC9A2Q9UBY0 812 aa10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 TSR3Q9UJK0 312 aaKnown RBP10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 FAM184BQ9ULE4 1060 aa10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 SAMM50Q9Y512 469 aa10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 ASTN1O14525 1302 aa10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 LOC285556D6RIA3 1793 aa10.52□□□□□ -0.73
APOBEC1-202ENST00000467171 PARP14Q460N5 1801 aa10.51□□□□□ -0.73
APOBEC1-202ENST00000467171 A0A0G2JMZ2 1700 aa10.51□□□□□ -0.73
APOBEC1-202ENST00000467171 KIF2AO00139 706 aaPredicted RBP10.51□□□□□ -0.73
APOBEC1-202ENST00000467171 SLC16A3O15427 465 aaKnown RBP10.51□□□□□ -0.73
APOBEC1-202ENST00000467171 HIP1RO75146 1068 aa10.51□□□□□ -0.73
APOBEC1-202ENST00000467171 STBD1O95210 358 aa10.51□□□□□ -0.73
APOBEC1-202ENST00000467171 MYBP10242 640 aa10.51□□□□□ -0.73
APOBEC1-202ENST00000467171 RPL13P26373 211 aaKnown RBP10.51□□□□□ -0.73
APOBEC1-202ENST00000467171 HOXD13P35453 343 aa10.51□□□□□ -0.73
APOBEC1-202ENST00000467171 PRSS12P56730 875 aa10.51□□□□□ -0.73
APOBEC1-202ENST00000467171 CNTN2Q02246 1040 aa10.51□□□□□ -0.73
APOBEC1-202ENST00000467171 ADAM9Q13443 819 aa10.51□□□□□ -0.73
APOBEC1-202ENST00000467171 MYBPC2Q14324 1141 aa10.51□□□□□ -0.73
APOBEC1-202ENST00000467171 UGCGQ16739 394 aa10.51□□□□□ -0.73
APOBEC1-202ENST00000467171 PTPN21Q16825 1174 aa10.51□□□□□ -0.73
APOBEC1-202ENST00000467171 CEP135Q66GS9 1140 aa10.51□□□□□ -0.73
APOBEC1-202ENST00000467171 KCNV1Q6PIU1 500 aa10.51□□□□□ -0.73
APOBEC1-202ENST00000467171 OTUD6AQ7L8S5 288 aa10.51□□□□□ -0.73
APOBEC1-202ENST00000467171 FRMD5Q7Z6J6 570 aa10.51□□□□□ -0.73
APOBEC1-202ENST00000467171 TRIM59Q8IWR1 403 aa10.51□□□□□ -0.73
APOBEC1-202ENST00000467171 NELFCDQ8IXH7 590 aa10.51□□□□□ -0.73
APOBEC1-202ENST00000467171 DAW1Q8N136 415 aa10.51□□□□□ -0.73
APOBEC1-202ENST00000467171 DRC1Q96MC2 740 aa10.51□□□□□ -0.73
APOBEC1-202ENST00000467171 PAGR1Q9BTK6 254 aa10.51□□□□□ -0.73
APOBEC1-202ENST00000467171 EDEM3Q9BZQ6 932 aa10.51□□□□□ -0.73
APOBEC1-202ENST00000467171 TTYH3Q9C0H2 523 aa10.51□□□□□ -0.73
APOBEC1-202ENST00000467171 NDST4Q9H3R1 872 aa10.51□□□□□ -0.73
APOBEC1-202ENST00000467171 C17orf75Q9HAS0 396 aa10.51□□□□□ -0.73
APOBEC1-202ENST00000467171 GBA2Q9HCG7 927 aaPredicted RBP10.51□□□□□ -0.73
APOBEC1-202ENST00000467171 LARSQ9P2J5 1176 aaKnown RBP10.51□□□□□ -0.73
APOBEC1-202ENST00000467171 CAPN11Q9UMQ6 739 aa10.51□□□□□ -0.73
APOBEC1-202ENST00000467171 IGKV6D-21A0A0A0MT36 114 aa10.5□□□□□ -0.73
APOBEC1-202ENST00000467171 A0A1W2PQJ5 194 aa10.5□□□□□ -0.73
APOBEC1-202ENST00000467171 PRPF6O94906 941 aaKnown RBP10.5□□□□□ -0.73
APOBEC1-202ENST00000467171 GCNT3O95395 438 aa10.5□□□□□ -0.73
APOBEC1-202ENST00000467171 SUPT20HL2P0C7V6 817 aa10.5□□□□□ -0.73
APOBEC1-202ENST00000467171 ZBTB48P10074 688 aaPredicted RBP10.5□□□□□ -0.73
APOBEC1-202ENST00000467171 PLS3P13797 630 aa10.5□□□□□ -0.73
APOBEC1-202ENST00000467171 CASP14P31944 242 aa10.5□□□□□ -0.73
APOBEC1-202ENST00000467171 GCLCP48506 637 aaPredicted RBP10.5□□□□□ -0.73
APOBEC1-202ENST00000467171 FXR1P51114 621 aaKnown RBP eCLIP10.5□□□□□ -0.73
APOBEC1-202ENST00000467171 ADKP55263 362 aaKnown RBP10.5□□□□□ -0.73
APOBEC1-202ENST00000467171 ACTR2P61160 394 aa10.5□□□□□ -0.73
APOBEC1-202ENST00000467171 SNRPFP62306 86 aaKnown RBP10.5□□□□□ -0.73
APOBEC1-202ENST00000467171 ERVK-9P63128 1117 aa10.5□□□□□ -0.73
APOBEC1-202ENST00000467171 ERVK-24P63145 666 aa10.5□□□□□ -0.73
APOBEC1-202ENST00000467171 CCNA1P78396 465 aa10.5□□□□□ -0.73
APOBEC1-202ENST00000467171 NEDD9Q14511 834 aa10.5□□□□□ -0.73
APOBEC1-202ENST00000467171 KCTD2Q14681 263 aa10.5□□□□□ -0.73
APOBEC1-202ENST00000467171 Q3C1V9 767 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms