RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 PCDHA2Q9Y5H9 948 aa16.94■□□□□ 0.3
HMGXB4-206ENST00000466438 NEDD4P46934 1319 aa16.94■□□□□ 0.3
HMGXB4-206ENST00000466438 GSTTP1A0A1W2PQM5 241 aa16.93■□□□□ 0.3
HMGXB4-206ENST00000466438 SPTLC1O15269 473 aa16.93■□□□□ 0.3
HMGXB4-206ENST00000466438 DCNP07585 359 aaKnown RBP16.93■□□□□ 0.3
HMGXB4-206ENST00000466438 PBX3P40426 434 aa16.93■□□□□ 0.3
HMGXB4-206ENST00000466438 NT5C2P49902 561 aa16.93■□□□□ 0.3
HMGXB4-206ENST00000466438 TRAF1Q13077 416 aa16.93■□□□□ 0.3
HMGXB4-206ENST00000466438 BMS1Q14692 1282 aaKnown RBP16.93■□□□□ 0.3
HMGXB4-206ENST00000466438 ODR4Q5SWX8 454 aa16.93■□□□□ 0.3
HMGXB4-206ENST00000466438 PHLDB3Q6NSJ2 640 aa16.93■□□□□ 0.3
HMGXB4-206ENST00000466438 TMC5Q6UXY8 1006 aa16.93■□□□□ 0.3
HMGXB4-206ENST00000466438 LRRC43Q8N309 656 aa16.93■□□□□ 0.3
HMGXB4-206ENST00000466438 NME8Q8N427 588 aa16.93■□□□□ 0.3
HMGXB4-206ENST00000466438 HELLSQ9NRZ9 838 aa16.93■□□□□ 0.3
HMGXB4-206ENST00000466438 SIT1Q9Y3P8 196 aa16.93■□□□□ 0.3
HMGXB4-206ENST00000466438 RPS6KA5O75582 802 aa16.92■□□□□ 0.3
HMGXB4-206ENST00000466438 EPCAMP16422 314 aa16.92■□□□□ 0.3
HMGXB4-206ENST00000466438 CA8P35219 290 aa16.92■□□□□ 0.3
HMGXB4-206ENST00000466438 GPR149Q86SP6 731 aa16.92■□□□□ 0.3
HMGXB4-206ENST00000466438 SLC39A11Q8N1S5 342 aa16.92■□□□□ 0.3
HMGXB4-206ENST00000466438 STAG2Q8N3U4 1231 aa16.92■□□□□ 0.3
HMGXB4-206ENST00000466438 SECISBP2LQ93073 1101 aaKnown RBP16.92■□□□□ 0.3
HMGXB4-206ENST00000466438 SFXN1Q9H9B4 322 aa16.92■□□□□ 0.3
HMGXB4-206ENST00000466438 CA14Q9ULX7 337 aa16.92■□□□□ 0.3
HMGXB4-206ENST00000466438 NOC2LQ9Y3T9 749 aaKnown RBP16.92■□□□□ 0.3
HMGXB4-206ENST00000466438 SMIM35A0A1B0GVV1 85 aa16.91■□□□□ 0.3
HMGXB4-206ENST00000466438 HOXA2O43364 376 aa16.91■□□□□ 0.3
HMGXB4-206ENST00000466438 FAM189BP81408 668 aa16.91■□□□□ 0.3
HMGXB4-206ENST00000466438 ACAP1Q15027 740 aa16.91■□□□□ 0.3
HMGXB4-206ENST00000466438 NONOQ15233 471 aaKnown RBP eCLIP16.91■□□□□ 0.3
HMGXB4-206ENST00000466438 PCNX4Q63HM2 1172 aa16.91■□□□□ 0.3
HMGXB4-206ENST00000466438 NLRX1Q86UT6 975 aa16.91■□□□□ 0.3
HMGXB4-206ENST00000466438 CABP7Q86V35 215 aa16.91■□□□□ 0.3
HMGXB4-206ENST00000466438 ENAHQ8N8S7 591 aaPredicted RBP16.91■□□□□ 0.3
HMGXB4-206ENST00000466438 TMEM87AQ8NBN3 555 aa16.91■□□□□ 0.3
HMGXB4-206ENST00000466438 FEZF2Q8TBJ5 459 aa16.91■□□□□ 0.3
HMGXB4-206ENST00000466438 TNPO1Q92973 898 aaKnown RBP16.91■□□□□ 0.3
HMGXB4-206ENST00000466438 CASD1Q96PB1 797 aa16.91■□□□□ 0.3
HMGXB4-206ENST00000466438 RWDD1Q9H446 243 aaPredicted RBP16.91■□□□□ 0.3
HMGXB4-206ENST00000466438 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.9■□□□□ 0.3
HMGXB4-206ENST00000466438 KLRF2D3W0D1 207 aa16.9■□□□□ 0.3
HMGXB4-206ENST00000466438 GPR182O15218 404 aa16.9■□□□□ 0.3
HMGXB4-206ENST00000466438 CXCL14O95715 111 aa16.9■□□□□ 0.3
HMGXB4-206ENST00000466438 SRFP11831 508 aa16.9■□□□□ 0.3
HMGXB4-206ENST00000466438 KCNA2P16389 499 aa16.9■□□□□ 0.3
HMGXB4-206ENST00000466438 ZNF528Q3MIS6 628 aa16.9■□□□□ 0.3
HMGXB4-206ENST00000466438 MAML2Q8IZL2 1156 aaPredicted RBP16.9■□□□□ 0.3
HMGXB4-206ENST00000466438 SLC22A17Q8WUG5 538 aa16.9■□□□□ 0.3
HMGXB4-206ENST00000466438 ZSCAN10Q96SZ4 725 aaPredicted RBP16.9■□□□□ 0.3
HMGXB4-206ENST00000466438 DCTPP1Q9H773 170 aa16.9■□□□□ 0.3
HMGXB4-206ENST00000466438 ST3GAL5Q9UNP4 418 aa16.9■□□□□ 0.3
HMGXB4-206ENST00000466438 GINS2Q9Y248 185 aa16.9■□□□□ 0.3
HMGXB4-206ENST00000466438 IRAK3Q9Y616 596 aa16.9■□□□□ 0.3
HMGXB4-206ENST00000466438 CACNA1IQ9P0X4 2223 aa16.89■□□□□ 0.29
HMGXB4-206ENST00000466438 POTEMA6NI47 508 aa16.89■□□□□ 0.29
HMGXB4-206ENST00000466438 ATP9AO75110 1047 aa16.89■□□□□ 0.29
HMGXB4-206ENST00000466438 GIT2Q14161 759 aa16.89■□□□□ 0.29
HMGXB4-206ENST00000466438 LETM2Q2VYF4 491 aa16.89■□□□□ 0.29
HMGXB4-206ENST00000466438 POTEGQ6S5H5 508 aa16.89■□□□□ 0.29
HMGXB4-206ENST00000466438 HOMER1Q86YM7 354 aa16.89■□□□□ 0.29
HMGXB4-206ENST00000466438 ABI1Q8IZP0 508 aa16.89■□□□□ 0.29
HMGXB4-206ENST00000466438 TRAPPC12Q8WVT3 735 aa16.89■□□□□ 0.29
HMGXB4-206ENST00000466438 TMEM40Q8WWA1 233 aa16.89■□□□□ 0.29
HMGXB4-206ENST00000466438 CDHR1Q96JP9 859 aa16.89■□□□□ 0.29
HMGXB4-206ENST00000466438 RNF19AQ9NV58 838 aa16.89■□□□□ 0.29
HMGXB4-206ENST00000466438 DMWDQ09019 674 aa16.88■□□□□ 0.29
HMGXB4-206ENST00000466438 PLCB4Q15147 1175 aa16.88■□□□□ 0.29
HMGXB4-206ENST00000466438 MCMDC2Q4G0Z9 681 aa16.88■□□□□ 0.29
HMGXB4-206ENST00000466438 PPM1JQ5JR12 505 aa16.88■□□□□ 0.29
HMGXB4-206ENST00000466438 SLC44A3Q8N4M1 653 aa16.88■□□□□ 0.29
HMGXB4-206ENST00000466438 PJA1Q8NG27 643 aa16.88■□□□□ 0.29
HMGXB4-206ENST00000466438 RSAD2Q8WXG1 361 aa16.88■□□□□ 0.29
HMGXB4-206ENST00000466438 GPRASP2Q96D09 838 aa16.88■□□□□ 0.29
HMGXB4-206ENST00000466438 ZBP1Q9H171 429 aa16.88■□□□□ 0.29
HMGXB4-206ENST00000466438 CDHR5Q9HBB8 845 aa16.88■□□□□ 0.29
HMGXB4-206ENST00000466438 ARHGEF3Q9NR81 526 aa16.88■□□□□ 0.29
HMGXB4-206ENST00000466438 FBXO4Q9UKT5 387 aa16.88■□□□□ 0.29
HMGXB4-206ENST00000466438 USP18Q9UMW8 372 aa16.88■□□□□ 0.29
HMGXB4-206ENST00000466438 PCDHGA2Q9Y5H1 932 aa16.88■□□□□ 0.29
HMGXB4-206ENST00000466438 SPDYE4A6NLX3 237 aa16.87■□□□□ 0.29
HMGXB4-206ENST00000466438 GLULP15104 373 aa16.87■□□□□ 0.29
HMGXB4-206ENST00000466438 HDAC1Q13547 482 aaPredicted RBP16.87■□□□□ 0.29
HMGXB4-206ENST00000466438 DSC3Q14574 896 aa16.87■□□□□ 0.29
HMGXB4-206ENST00000466438 MTHFD1LQ6UB35 978 aa16.87■□□□□ 0.29
HMGXB4-206ENST00000466438 C15orf39Q6ZRI6 1047 aa16.87■□□□□ 0.29
HMGXB4-206ENST00000466438 PPFIBP1Q86W92 1011 aa16.87■□□□□ 0.29
HMGXB4-206ENST00000466438 VPS52Q8N1B4 723 aa16.87■□□□□ 0.29
HMGXB4-206ENST00000466438 GPR152Q8TDT2 470 aa16.87■□□□□ 0.29
HMGXB4-206ENST00000466438 NXPE3Q969Y0 559 aa16.87■□□□□ 0.29
HMGXB4-206ENST00000466438 TMEM169Q96HH4 297 aa16.87■□□□□ 0.29
HMGXB4-206ENST00000466438 PCYT2Q99447 389 aa16.87■□□□□ 0.29
HMGXB4-206ENST00000466438 AZI2Q9H6S1 392 aa16.87■□□□□ 0.29
HMGXB4-206ENST00000466438 SMG5Q9UPR3 1016 aaKnown RBP16.87■□□□□ 0.29
HMGXB4-206ENST00000466438 PCDHB15Q9Y5E8 787 aa16.87■□□□□ 0.29
HMGXB4-206ENST00000466438 C2orf16Q68DN1 1984 aa16.86■□□□□ 0.29
HMGXB4-206ENST00000466438 A0A0D9SFI3 127 aa16.86■□□□□ 0.29
HMGXB4-206ENST00000466438 N4BP1O75113 896 aaKnown RBP16.86■□□□□ 0.29
HMGXB4-206ENST00000466438 CTSAP10619 480 aa16.86■□□□□ 0.29
HMGXB4-206ENST00000466438 TGM1P22735 817 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms