RNA–Protein interactions for RNA: ENST00000466141.1

RPUSD3-212, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-212ENST00000466141 GPHNQ9NQX3 736 aaPredicted RBP8.16□□□□□ -1.1
RPUSD3-212ENST00000466141 CPSF2Q9P2I0 782 aaKnown RBP8.16□□□□□ -1.1
RPUSD3-212ENST00000466141 SFMBT1Q9UHJ3 866 aa8.16□□□□□ -1.1
RPUSD3-212ENST00000466141 DMGDHQ9UI17 866 aaKnown RBP8.16□□□□□ -1.1
RPUSD3-212ENST00000466141 ACAD8Q9UKU7 415 aa8.16□□□□□ -1.1
RPUSD3-212ENST00000466141 NOD1Q9Y239 953 aa8.16□□□□□ -1.1
RPUSD3-212ENST00000466141 UQCRHLA0A096LP55 91 aa8.15□□□□□ -1.1
RPUSD3-212ENST00000466141 NBNO60934 754 aa8.15□□□□□ -1.1
RPUSD3-212ENST00000466141 GJB5O95377 273 aa8.15□□□□□ -1.1
RPUSD3-212ENST00000466141 BAG4O95429 457 aaKnown RBP8.15□□□□□ -1.1
RPUSD3-212ENST00000466141 ECEL1O95672 775 aa8.15□□□□□ -1.1
RPUSD3-212ENST00000466141 UQCRHP07919 91 aa8.15□□□□□ -1.1
RPUSD3-212ENST00000466141 PARP1P09874 1014 aaKnown RBP8.15□□□□□ -1.1
RPUSD3-212ENST00000466141 GOLGA8HP0CJ92 632 aa8.15□□□□□ -1.1
RPUSD3-212ENST00000466141 IRS1P35568 1242 aa8.15□□□□□ -1.1
RPUSD3-212ENST00000466141 LIFRP42702 1097 aa8.15□□□□□ -1.1
RPUSD3-212ENST00000466141 CPT1AP50416 773 aa8.15□□□□□ -1.1
RPUSD3-212ENST00000466141 CBX1P83916 185 aa8.15□□□□□ -1.1
RPUSD3-212ENST00000466141 RBL2Q08999 1139 aa8.15□□□□□ -1.1
RPUSD3-212ENST00000466141 BFSP2Q13515 415 aa8.15□□□□□ -1.1
RPUSD3-212ENST00000466141 TRIM29Q14134 588 aa8.15□□□□□ -1.1
RPUSD3-212ENST00000466141 KRT32Q14532 448 aa8.15□□□□□ -1.1
RPUSD3-212ENST00000466141 C8orf34Q49A92 452 aa8.15□□□□□ -1.1
RPUSD3-212ENST00000466141 IER5LQ5T953 404 aa8.15□□□□□ -1.1
RPUSD3-212ENST00000466141 NFRKBQ6P4R8 1299 aa8.15□□□□□ -1.1
RPUSD3-212ENST00000466141 SGMS1Q86VZ5 419 aa8.15□□□□□ -1.1
RPUSD3-212ENST00000466141 EFCAB13Q8IY85 973 aa8.15□□□□□ -1.1
RPUSD3-212ENST00000466141 ZNF654Q8IZM8 581 aa8.15□□□□□ -1.1
RPUSD3-212ENST00000466141 CHCHD4Q8N4Q1 142 aa8.15□□□□□ -1.1
RPUSD3-212ENST00000466141 FBXO22Q8NEZ5 403 aa8.15□□□□□ -1.1
RPUSD3-212ENST00000466141 GOLGA1Q92805 767 aa8.15□□□□□ -1.1
RPUSD3-212ENST00000466141 MTMR8Q96EF0 704 aa8.15□□□□□ -1.1
RPUSD3-212ENST00000466141 IWS1Q96ST2 819 aa8.15□□□□□ -1.1
RPUSD3-212ENST00000466141 RAD9AQ99638 391 aa8.15□□□□□ -1.1
RPUSD3-212ENST00000466141 EPAS1Q99814 870 aa8.15□□□□□ -1.1
RPUSD3-212ENST00000466141 KCNH6Q9H252 994 aa8.15□□□□□ -1.1
RPUSD3-212ENST00000466141 ZHX3Q9H4I2 956 aa8.15□□□□□ -1.1
RPUSD3-212ENST00000466141 TMEM63CQ9P1W3 806 aa8.15□□□□□ -1.1
RPUSD3-212ENST00000466141 TFIP11Q9UBB9 837 aaKnown RBP8.15□□□□□ -1.1
RPUSD3-212ENST00000466141 MAD2L2Q9UI95 211 aa8.15□□□□□ -1.1
RPUSD3-212ENST00000466141 MUTYHQ9UIF7 546 aa8.15□□□□□ -1.1
RPUSD3-212ENST00000466141 KLF15Q9UIH9 416 aa8.15□□□□□ -1.1
RPUSD3-212ENST00000466141 BLOC1S6Q9UL45 172 aa8.15□□□□□ -1.1
RPUSD3-212ENST00000466141 TMCC3Q9ULS5 477 aa8.15□□□□□ -1.1
RPUSD3-212ENST00000466141 SSUH2Q9Y2M2 353 aa8.15□□□□□ -1.1
RPUSD3-212ENST00000466141 SNX14Q9Y5W7 946 aa8.15□□□□□ -1.1
RPUSD3-212ENST00000466141 TRIP12Q14669 1992 aaPredicted RBP8.15□□□□□ -1.11
RPUSD3-212ENST00000466141 USP34Q70CQ2 3546 aa8.14□□□□□ -1.11
RPUSD3-212ENST00000466141 NID2Q14112 1375 aa8.14□□□□□ -1.11
RPUSD3-212ENST00000466141 ERICH2A1L162 156 aa8.14□□□□□ -1.11
RPUSD3-212ENST00000466141 C19orf67A6NJJ6 358 aa8.14□□□□□ -1.11
RPUSD3-212ENST00000466141 NFIBO00712 420 aa8.14□□□□□ -1.11
RPUSD3-212ENST00000466141 DNAJC6O75061 913 aa8.14□□□□□ -1.11
RPUSD3-212ENST00000466141 DDAH1O94760 285 aa8.14□□□□□ -1.11
RPUSD3-212ENST00000466141 PYGBP11216 843 aa8.14□□□□□ -1.11
RPUSD3-212ENST00000466141 TNNT1P13805 278 aa8.14□□□□□ -1.11
RPUSD3-212ENST00000466141 CLK2P49760 499 aaKnown RBP8.14□□□□□ -1.11
RPUSD3-212ENST00000466141 ALDH5A1P51649 535 aaPredicted RBP8.14□□□□□ -1.11
RPUSD3-212ENST00000466141 SH3BGRP55822 239 aaPredicted RBP8.14□□□□□ -1.11
RPUSD3-212ENST00000466141 EXOSC10Q01780 885 aaKnown RBP8.14□□□□□ -1.11
RPUSD3-212ENST00000466141 BAATQ14032 418 aaPredicted RBP8.14□□□□□ -1.11
RPUSD3-212ENST00000466141 DHX8Q14562 1220 aaKnown RBP8.14□□□□□ -1.11
RPUSD3-212ENST00000466141 CLUL1Q15846 466 aa8.14□□□□□ -1.11
RPUSD3-212ENST00000466141 PTGISQ16647 500 aa8.14□□□□□ -1.11
RPUSD3-212ENST00000466141 TKFCQ3LXA3 575 aa8.14□□□□□ -1.11
RPUSD3-212ENST00000466141 TCEAL5Q5H9L2 206 aa8.14□□□□□ -1.11
RPUSD3-212ENST00000466141 IQCEQ6IPM2 695 aa8.14□□□□□ -1.11
RPUSD3-212ENST00000466141 GDF6Q6KF10 455 aaPredicted RBP8.14□□□□□ -1.11
RPUSD3-212ENST00000466141 CNKSR3Q6P9H4 555 aa8.14□□□□□ -1.11
RPUSD3-212ENST00000466141 SASS6Q6UVJ0 657 aa8.14□□□□□ -1.11
RPUSD3-212ENST00000466141 SLC30A10Q6XR72 485 aa8.14□□□□□ -1.11
RPUSD3-212ENST00000466141 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.14□□□□□ -1.11
RPUSD3-212ENST00000466141 LRRC8DQ7L1W4 858 aa8.14□□□□□ -1.11
RPUSD3-212ENST00000466141 NDUFAF2Q8N183 169 aa8.14□□□□□ -1.11
RPUSD3-212ENST00000466141 PDCL2Q8N4E4 241 aa8.14□□□□□ -1.11
RPUSD3-212ENST00000466141 TAF4BQ92750 862 aa8.14□□□□□ -1.11
RPUSD3-212ENST00000466141 IL17RAQ96F46 866 aa8.14□□□□□ -1.11
RPUSD3-212ENST00000466141 TCEANC2Q96MN5 208 aa8.14□□□□□ -1.11
RPUSD3-212ENST00000466141 NEK1Q96PY6 1258 aa8.14□□□□□ -1.11
RPUSD3-212ENST00000466141 MAP3K14Q99558 947 aa8.14□□□□□ -1.11
RPUSD3-212ENST00000466141 SH3GL3Q99963 347 aa8.14□□□□□ -1.11
RPUSD3-212ENST00000466141 MYL10Q9BUA6 226 aa8.14□□□□□ -1.11
RPUSD3-212ENST00000466141 USP26Q9BXU7 913 aa8.14□□□□□ -1.11
RPUSD3-212ENST00000466141 LRRC2Q9BYS8 371 aa8.14□□□□□ -1.11
RPUSD3-212ENST00000466141 UNC45AQ9H3U1 944 aa8.14□□□□□ -1.11
RPUSD3-212ENST00000466141 CAPN10Q9HC96 672 aa8.14□□□□□ -1.11
RPUSD3-212ENST00000466141 FAM86C1Q9NVL1 165 aa8.14□□□□□ -1.11
RPUSD3-212ENST00000466141 CCPG1Q9ULG6 757 aa8.14□□□□□ -1.11
RPUSD3-212ENST00000466141 CFAP54Q96N23 3096 aa8.13□□□□□ -1.11
RPUSD3-212ENST00000466141 TECTAO75443 2155 aa8.13□□□□□ -1.11
RPUSD3-212ENST00000466141 CYTH3O43739 400 aa8.13□□□□□ -1.11
RPUSD3-212ENST00000466141 PPP1R11O60927 126 aaPredicted RBP8.13□□□□□ -1.11
RPUSD3-212ENST00000466141 ARIH2O95376 493 aa8.13□□□□□ -1.11
RPUSD3-212ENST00000466141 XRCC6P12956 609 aaKnown RBP eCLIP8.13□□□□□ -1.11
RPUSD3-212ENST00000466141 CPA1P15085 419 aa8.13□□□□□ -1.11
RPUSD3-212ENST00000466141 SELPP16109 830 aa8.13□□□□□ -1.11
RPUSD3-212ENST00000466141 POU5F1BQ06416 359 aa8.13□□□□□ -1.11
RPUSD3-212ENST00000466141 KRT72Q14CN4 511 aa8.13□□□□□ -1.11
RPUSD3-212ENST00000466141 PPP2R5BQ15173 497 aa8.13□□□□□ -1.11
RPUSD3-212ENST00000466141 QRICH1Q2TAL8 776 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms