RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 KLRK1P26718 216 aa21.41■■□□□ 1.02
SDF4-205ENST00000465727 MYO1EQ12965 1108 aa21.41■■□□□ 1.02
SDF4-205ENST00000465727 NEDD1Q8NHV4 660 aa21.41■■□□□ 1.02
SDF4-205ENST00000465727 L3MBTL3Q96JM7 780 aaPredicted RBP21.41■■□□□ 1.02
SDF4-205ENST00000465727 TBC1D7Q9P0N9 293 aa21.41■■□□□ 1.02
SDF4-205ENST00000465727 PARP2Q9UGN5 583 aa21.41■■□□□ 1.02
SDF4-205ENST00000465727 SNED1Q8TER0 1413 aa21.4■■□□□ 1.02
SDF4-205ENST00000465727 SPDYE3A6NKU9 549 aa21.4■■□□□ 1.02
SDF4-205ENST00000465727 ANP32DO95626 131 aa21.4■■□□□ 1.02
SDF4-205ENST00000465727 MYCNP04198 464 aaPredicted RBP21.4■■□□□ 1.02
SDF4-205ENST00000465727 PPP2R5AQ15172 486 aa21.4■■□□□ 1.02
SDF4-205ENST00000465727 PTPROQ16827 1216 aa21.4■■□□□ 1.02
SDF4-205ENST00000465727 KIAA1755Q5JYT7 1200 aa21.4■■□□□ 1.02
SDF4-205ENST00000465727 PPP1R18Q6NYC8 613 aa21.4■■□□□ 1.02
SDF4-205ENST00000465727 TAOK1Q7L7X3 1001 aa21.4■■□□□ 1.02
SDF4-205ENST00000465727 TBC1D1Q86TI0 1168 aaPredicted RBP21.4■■□□□ 1.02
SDF4-205ENST00000465727 RFFLQ8WZ73 363 aa21.4■■□□□ 1.02
SDF4-205ENST00000465727 GOPCQ9HD26 462 aa21.4■■□□□ 1.02
SDF4-205ENST00000465727 DDX3XO00571 662 aaKnown RBP eCLIP21.4■■□□□ 1.022e-11■■■■■ 29.8
SDF4-205ENST00000465727 GSTO1P78417 241 aa21.4■■□□□ 1.02
SDF4-205ENST00000465727 SH3RF3Q8TEJ3 882 aaPredicted RBP21.4■■□□□ 1.02
SDF4-205ENST00000465727 NAP1L4Q99733 375 aaKnown RBP21.4■■□□□ 1.02
SDF4-205ENST00000465727 ELAC2Q9BQ52 826 aaKnown RBP21.4■■□□□ 1.02
SDF4-205ENST00000465727 TRIM31Q9BZY9 425 aa21.4■■□□□ 1.02
SDF4-205ENST00000465727 METTL14Q9HCE5 456 aaKnown RBP21.4■■□□□ 1.02
SDF4-205ENST00000465727 RGS17Q9UGC6 210 aaPredicted RBP21.4■■□□□ 1.02
SDF4-205ENST00000465727 DDX25Q9UHL0 483 aaKnown RBP21.4■■□□□ 1.02
SDF4-205ENST00000465727 SPATA31A6Q5VVP1 1343 aa21.39■■□□□ 1.02
SDF4-205ENST00000465727 GTPBP10A4D1E9 387 aaKnown RBP21.39■■□□□ 1.01
SDF4-205ENST00000465727 DDX3YO15523 660 aaKnown RBP21.39■■□□□ 1.01
SDF4-205ENST00000465727 VIMP08670 466 aaKnown RBP21.39■■□□□ 1.01
SDF4-205ENST00000465727 TMEM253P0C7T8 217 aa21.39■■□□□ 1.01
SDF4-205ENST00000465727 PLA2G4BP0C869 781 aa21.39■■□□□ 1.01
SDF4-205ENST00000465727 NQO1P15559 274 aaKnown RBP21.39■■□□□ 1.01
SDF4-205ENST00000465727 HSPA6P17066 643 aa21.39■■□□□ 1.01
SDF4-205ENST00000465727 CCND1P24385 295 aa21.39■■□□□ 1.01
SDF4-205ENST00000465727 PPP4CP60510 307 aa21.39■■□□□ 1.01
SDF4-205ENST00000465727 EPHA7Q15375 998 aa21.39■■□□□ 1.01
SDF4-205ENST00000465727 TNFAIP8L3Q5GJ75 292 aa21.39■■□□□ 1.01
SDF4-205ENST00000465727 CLEC4GQ6UXB4 293 aa21.39■■□□□ 1.01
SDF4-205ENST00000465727 EP400NLQ6ZTU2 488 aa21.39■■□□□ 1.01
SDF4-205ENST00000465727 SLC44A5Q8NCS7 719 aa21.39■■□□□ 1.01
SDF4-205ENST00000465727 EYA3Q99504 573 aa21.39■■□□□ 1.01
SDF4-205ENST00000465727 PRMT1Q99873 361 aaKnown RBP21.39■■□□□ 1.01
SDF4-205ENST00000465727 PLCD4Q9BRC7 762 aa21.39■■□□□ 1.01
SDF4-205ENST00000465727 VAT1LQ9HCJ6 419 aa21.39■■□□□ 1.01
SDF4-205ENST00000465727 PCDHA12Q9UN75 941 aa21.39■■□□□ 1.01
SDF4-205ENST00000465727 SNX3O60493 162 aa21.38■■□□□ 1.01
SDF4-205ENST00000465727 LMNB1P20700 586 aa21.38■■□□□ 1.01
SDF4-205ENST00000465727 MAPK7Q13164 816 aa21.38■■□□□ 1.01
SDF4-205ENST00000465727 ERFEQ4G0M1 354 aa21.38■■□□□ 1.01
SDF4-205ENST00000465727 GPBP1Q86WP2 473 aa21.38■■□□□ 1.01
SDF4-205ENST00000465727 HAS1Q92839 578 aa21.38■■□□□ 1.01
SDF4-205ENST00000465727 RNF25Q96BH1 459 aaPredicted RBP21.38■■□□□ 1.01
SDF4-205ENST00000465727 AZI2Q9H6S1 392 aa21.38■■□□□ 1.01
SDF4-205ENST00000465727 DOT1LQ8TEK3 1739 aa21.38■■□□□ 1.01
SDF4-205ENST00000465727 TULP1O00294 542 aaPredicted RBP21.38■■□□□ 1.01
SDF4-205ENST00000465727 KIAA0391O15091 583 aaKnown RBP21.38■■□□□ 1.01
SDF4-205ENST00000465727 OAS1P00973 400 aaKnown RBP21.38■■□□□ 1.01
SDF4-205ENST00000465727 CYP11B2P19099 503 aa21.38■■□□□ 1.01
SDF4-205ENST00000465727 NOVP48745 357 aa21.38■■□□□ 1.01
SDF4-205ENST00000465727 GALCP54803 685 aa21.38■■□□□ 1.01
SDF4-205ENST00000465727 C16orf86Q6ZW13 317 aa21.38■■□□□ 1.01
SDF4-205ENST00000465727 JAMLQ86YT9 394 aa21.38■■□□□ 1.01
SDF4-205ENST00000465727 CELF1Q92879 486 aaKnown RBP21.38■■□□□ 1.01
SDF4-205ENST00000465727 MTRF1LQ9UGC7 380 aaKnown RBP21.38■■□□□ 1.01
SDF4-205ENST00000465727 TNRC6CQ9HCJ0 1690 aaKnown RBP21.37■■□□□ 1.01
SDF4-205ENST00000465727 SLC16A3O15427 465 aaKnown RBP21.37■■□□□ 1.01
SDF4-205ENST00000465727 CALUO43852 315 aaPredicted RBP21.37■■□□□ 1.01
SDF4-205ENST00000465727 MARCH6O60337 910 aa21.37■■□□□ 1.01
SDF4-205ENST00000465727 LDHBP07195 334 aaKnown RBP21.37■■□□□ 1.01
SDF4-205ENST00000465727 PPATQ06203 517 aa21.37■■□□□ 1.01
SDF4-205ENST00000465727 PLS1Q14651 629 aa21.37■■□□□ 1.01
SDF4-205ENST00000465727 FAM133BQ5BKY9 247 aaKnown RBP21.37■■□□□ 1.01
SDF4-205ENST00000465727 C3orf67Q6ZVT6 689 aa21.37■■□□□ 1.01
SDF4-205ENST00000465727 CEP120Q8N960 986 aa21.37■■□□□ 1.01
SDF4-205ENST00000465727 SLC30A5Q8TAD4 765 aa21.37■■□□□ 1.01
SDF4-205ENST00000465727 U2AF1L4Q8WU68 220 aaKnown RBP21.37■■□□□ 1.01
SDF4-205ENST00000465727 SIX2Q9NPC8 291 aa21.37■■□□□ 1.01
SDF4-205ENST00000465727 TFCP2L1Q9NZI6 479 aa21.37■■□□□ 1.01
SDF4-205ENST00000465727 NHSQ6T4R5 1651 aa21.37■■□□□ 1.01
SDF4-205ENST00000465727 TLDC2A0PJX2 215 aa21.36■■□□□ 1.01
SDF4-205ENST00000465727 O00370 1275 aa21.36■■□□□ 1.01
SDF4-205ENST00000465727 PDXKO00764 312 aa21.36■■□□□ 1.01
SDF4-205ENST00000465727 LIN7AO14910 233 aaPredicted RBP21.36■■□□□ 1.01
SDF4-205ENST00000465727 STAT1P42224 750 aa21.36■■□□□ 1.01
SDF4-205ENST00000465727 TNNI2P48788 182 aa21.36■■□□□ 1.01
SDF4-205ENST00000465727 PLTPP55058 493 aa21.36■■□□□ 1.01
SDF4-205ENST00000465727 SLC29A2Q14542 456 aa21.36■■□□□ 1.01
SDF4-205ENST00000465727 KNOP1Q1ED39 458 aaKnown RBP21.36■■□□□ 1.01
SDF4-205ENST00000465727 GALNTL6Q49A17 601 aa21.36■■□□□ 1.01
SDF4-205ENST00000465727 DCAF12L1Q5VU92 463 aa21.36■■□□□ 1.01
SDF4-205ENST00000465727 MFSD5Q6N075 450 aa21.36■■□□□ 1.01
SDF4-205ENST00000465727 ZDHHC24Q6UX98 284 aa21.36■■□□□ 1.01
SDF4-205ENST00000465727 AGAP11Q8TF27 550 aa21.36■■□□□ 1.01
SDF4-205ENST00000465727 IFT74Q96LB3 600 aa21.36■■□□□ 1.01
SDF4-205ENST00000465727 HOMER3Q9NSC5 361 aa21.36■■□□□ 1.01
SDF4-205ENST00000465727 USP15Q9Y4E8 981 aaPredicted RBP21.36■■□□□ 1.01
SDF4-205ENST00000465727 RPTORQ8N122 1335 aa21.36■■□□□ 1.01
SDF4-205ENST00000465727 E9PMD0 336 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms