RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 NIFKQ9BYG3 293 aaKnown RBP13.26□□□□□ -0.29
APTX-213ENST00000465003 CDHR5Q9HBB8 845 aa13.26□□□□□ -0.29
APTX-213ENST00000465003 GPRC5CQ9NQ84 441 aa13.26□□□□□ -0.29
APTX-213ENST00000465003 PCDHA7Q9UN72 937 aa13.26□□□□□ -0.29
APTX-213ENST00000465003 AKT3Q9Y243 479 aa13.26□□□□□ -0.29
APTX-213ENST00000465003 YEATS4O95619 227 aa13.25□□□□□ -0.29
APTX-213ENST00000465003 CHRNA1P02708 482 aa13.25□□□□□ -0.29
APTX-213ENST00000465003 SSBP05455 408 aaKnown RBP eCLIP13.25□□□□□ -0.29
APTX-213ENST00000465003 PDIA4P13667 645 aaKnown RBP13.25□□□□□ -0.29
APTX-213ENST00000465003 PLCG1P19174 1290 aa13.25□□□□□ -0.29
APTX-213ENST00000465003 UBA7P41226 1012 aa13.25□□□□□ -0.29
APTX-213ENST00000465003 KRT85P78386 507 aa13.25□□□□□ -0.29
APTX-213ENST00000465003 GPNMBQ14956 572 aa13.25□□□□□ -0.29
APTX-213ENST00000465003 KIZQ2M2Z5 673 aa13.25□□□□□ -0.29
APTX-213ENST00000465003 SHC4Q6S5L8 630 aa13.25□□□□□ -0.29
APTX-213ENST00000465003 KIAA0319LQ8IZA0 1049 aa13.25□□□□□ -0.29
APTX-213ENST00000465003 NEK9Q8TD19 979 aa13.25□□□□□ -0.29
APTX-213ENST00000465003 VWCEQ96DN2 955 aa13.25□□□□□ -0.29
APTX-213ENST00000465003 SPATA32Q96LK8 384 aa13.25□□□□□ -0.29
APTX-213ENST00000465003 PCDHA2Q9Y5H9 948 aa13.25□□□□□ -0.29
APTX-213ENST00000465003 COL1A2P08123 1366 aa13.25□□□□□ -0.29
APTX-213ENST00000465003 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.25□□□□□ -0.29
APTX-213ENST00000465003 NBNO60934 754 aa13.25□□□□□ -0.29
APTX-213ENST00000465003 IQCF3P0C7M6 154 aa13.25□□□□□ -0.29
APTX-213ENST00000465003 LONP1P36776 959 aaKnown RBP13.25□□□□□ -0.29
APTX-213ENST00000465003 CACNB1Q02641 598 aaPredicted RBP13.25□□□□□ -0.29
APTX-213ENST00000465003 EMC2Q15006 297 aa13.25□□□□□ -0.29
APTX-213ENST00000465003 TCTN1Q2MV58 587 aa13.25□□□□□ -0.29
APTX-213ENST00000465003 AXDND1Q5T1B0 1012 aaPredicted RBP13.25□□□□□ -0.29
APTX-213ENST00000465003 CDK5RAP3Q96JB5 506 aa13.25□□□□□ -0.29
APTX-213ENST00000465003 LBHD1Q9BQE6 289 aaPredicted RBP13.25□□□□□ -0.29
APTX-213ENST00000465003 XPNPEP1Q9NQW7 623 aa13.25□□□□□ -0.29
APTX-213ENST00000465003 CDY2AQ9Y6F7 541 aa13.25□□□□□ -0.29
APTX-213ENST00000465003 GHRP10912 638 aa13.24□□□□□ -0.29
APTX-213ENST00000465003 SELPP16109 830 aa13.24□□□□□ -0.29
APTX-213ENST00000465003 BFSP2Q13515 415 aa13.24□□□□□ -0.29
APTX-213ENST00000465003 C9orf50Q5SZB4 431 aa13.24□□□□□ -0.29
APTX-213ENST00000465003 MFSD5Q6N075 450 aa13.24□□□□□ -0.29
APTX-213ENST00000465003 TAF2Q6P1X5 1199 aa13.24□□□□□ -0.29
APTX-213ENST00000465003 RETREG2Q8NC44 543 aa13.24□□□□□ -0.29
APTX-213ENST00000465003 CAGE1Q8TC20 777 aa13.24□□□□□ -0.29
APTX-213ENST00000465003 TMEM40Q8WWA1 233 aa13.24□□□□□ -0.29
APTX-213ENST00000465003 OSMRQ99650 979 aa13.24□□□□□ -0.29
APTX-213ENST00000465003 CFAP45Q9UL16 551 aa13.24□□□□□ -0.29
APTX-213ENST00000465003 NPHP3-ACAD11A0A0J9YXS1 232 aa13.23□□□□□ -0.29
APTX-213ENST00000465003 ARHGEF35A5YM69 484 aa13.23□□□□□ -0.29
APTX-213ENST00000465003 RSPH10B2B2RC85 870 aa13.23□□□□□ -0.29
APTX-213ENST00000465003 PITPNM1O00562 1244 aa13.23□□□□□ -0.29
APTX-213ENST00000465003 DKC1O60832 514 aaKnown RBP eCLIP13.23□□□□□ -0.29
APTX-213ENST00000465003 PPP6R2O75170 966 aa13.23□□□□□ -0.29
APTX-213ENST00000465003 LYPLA2O95372 231 aa13.23□□□□□ -0.29
APTX-213ENST00000465003 RSPH10BP0C881 870 aa13.23□□□□□ -0.29
APTX-213ENST00000465003 FGFR4P22455 802 aa13.23□□□□□ -0.29
APTX-213ENST00000465003 FPGSQ05932 587 aa13.23□□□□□ -0.29
APTX-213ENST00000465003 C16orf59Q7L2K0 433 aa13.23□□□□□ -0.29
APTX-213ENST00000465003 OTUD6AQ7L8S5 288 aa13.23□□□□□ -0.29
APTX-213ENST00000465003 RHPN2Q8IUC4 686 aa13.23□□□□□ -0.29
APTX-213ENST00000465003 LINC01465Q8N7H1 131 aa13.23□□□□□ -0.29
APTX-213ENST00000465003 SLC7A3Q8WY07 619 aa13.23□□□□□ -0.29
APTX-213ENST00000465003 TNPO1Q92973 898 aaKnown RBP13.23□□□□□ -0.29
APTX-213ENST00000465003 NACC1Q96RE7 527 aa13.23□□□□□ -0.29
APTX-213ENST00000465003 RUSC1Q9BVN2 902 aa13.23□□□□□ -0.29
APTX-213ENST00000465003 SEZ6LQ9BYH1 1024 aa13.23□□□□□ -0.29
APTX-213ENST00000465003 DHX33Q9H6R0 707 aaKnown RBP13.23□□□□□ -0.29
APTX-213ENST00000465003 EYSQ5T1H1 3165 aa13.23□□□□□ -0.29
APTX-213ENST00000465003 SMIM35A0A1B0GVV1 85 aa13.23□□□□□ -0.29
APTX-213ENST00000465003 MAFO75444 373 aaPredicted RBP13.23□□□□□ -0.29
APTX-213ENST00000465003 NLRP11P59045 1033 aaKnown RBP13.23□□□□□ -0.29
APTX-213ENST00000465003 MRPS6P82932 125 aaKnown RBP13.23□□□□□ -0.29
APTX-213ENST00000465003 MCM6Q14566 821 aa13.23□□□□□ -0.29
APTX-213ENST00000465003 TMEM119Q4V9L6 283 aa13.23□□□□□ -0.29
APTX-213ENST00000465003 PADI6Q6TGC4 694 aa13.23□□□□□ -0.29
APTX-213ENST00000465003 OTOP2Q7RTS6 562 aa13.23□□□□□ -0.29
APTX-213ENST00000465003 KCNG4Q8TDN1 519 aa13.23□□□□□ -0.29
APTX-213ENST00000465003 STAMQ92783 540 aa13.23□□□□□ -0.29
APTX-213ENST00000465003 AK8Q96MA6 479 aa13.23□□□□□ -0.29
APTX-213ENST00000465003 NLRP4Q96MN2 994 aa13.23□□□□□ -0.29
APTX-213ENST00000465003 SCLT1Q96NL6 688 aa13.23□□□□□ -0.29
APTX-213ENST00000465003 BLOC1S4Q9NUP1 217 aa13.23□□□□□ -0.29
APTX-213ENST00000465003 CHMP5Q9NZZ3 219 aa13.23□□□□□ -0.29
APTX-213ENST00000465003 RCOR1Q9UKL0 485 aa13.23□□□□□ -0.29
APTX-213ENST00000465003 ATP6V1DQ9Y5K8 247 aa13.23□□□□□ -0.29
APTX-213ENST00000465003 IBSPP21815 317 aaPredicted RBP13.22□□□□□ -0.29
APTX-213ENST00000465003 MGAT3Q09327 533 aa13.22□□□□□ -0.29
APTX-213ENST00000465003 FAM102BQ5T8I3 360 aa13.22□□□□□ -0.29
APTX-213ENST00000465003 TMEM199Q8N511 208 aa13.22□□□□□ -0.29
APTX-213ENST00000465003 CCDC155Q8N6L0 562 aa13.22□□□□□ -0.29
APTX-213ENST00000465003 CALML4Q96GE6 196 aa13.22□□□□□ -0.29
APTX-213ENST00000465003 MTRQ99707 1265 aa13.22□□□□□ -0.29
APTX-213ENST00000465003 UBE2OQ9C0C9 1292 aaKnown RBP13.22□□□□□ -0.29
APTX-213ENST00000465003 ATP6V0A4Q9HBG4 840 aa13.22□□□□□ -0.29
APTX-213ENST00000465003 ANKEF1Q9NU02 776 aa13.22□□□□□ -0.29
APTX-213ENST00000465003 SUCLA2Q9P2R7 463 aaPredicted RBP13.22□□□□□ -0.29
APTX-213ENST00000465003 DNM3Q9UQ16 869 aa13.22□□□□□ -0.29
APTX-213ENST00000465003 KDM3AQ9Y4C1 1321 aa13.22□□□□□ -0.29
APTX-213ENST00000465003 IGKV6-21A0A0C4DH24 114 aa13.21□□□□□ -0.29
APTX-213ENST00000465003 SFI1A8K8P3 1242 aa13.21□□□□□ -0.29
APTX-213ENST00000465003 NAALADL2Q58DX5 795 aa13.21□□□□□ -0.29
APTX-213ENST00000465003 TMCO2Q7Z6W1 182 aaPredicted RBP13.21□□□□□ -0.29
APTX-213ENST00000465003 ASAP3Q8TDY4 903 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms