RNA–Protein interactions for RNA: ENST00000464870.5

PTPN7-205, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 4

Gene PTPN7, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-205	ENST00000464870	SSB	P05455	408 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
PTPN7-205	ENST00000464870	PLA2G4B	P0C869	781 aa		13.73	□□□□□ -0.21
PTPN7-205	ENST00000464870	ATP4A	P20648	1035 aa		13.73	□□□□□ -0.21
PTPN7-205	ENST00000464870	FPGS	Q05932	587 aa		13.73	□□□□□ -0.21
PTPN7-205	ENST00000464870	PPFIA1	Q13136	1202 aa		13.73	□□□□□ -0.21
PTPN7-205	ENST00000464870	PTK7	Q13308	1070 aa		13.73	□□□□□ -0.21
PTPN7-205	ENST00000464870	PNOC	Q13519	176 aa		13.73	□□□□□ -0.21
PTPN7-205	ENST00000464870	CKAP2L	Q8IYA6	745 aa		13.73	□□□□□ -0.21
PTPN7-205	ENST00000464870	CAGE1	Q8TC20	777 aa		13.73	□□□□□ -0.21
PTPN7-205	ENST00000464870	AFAP1L1	Q8TED9	768 aa		13.73	□□□□□ -0.21
PTPN7-205	ENST00000464870	PYM1	Q9BRP8	204 aa	Known RBP	13.73	□□□□□ -0.21
PTPN7-205	ENST00000464870	BLZF1	Q9H2G9	400 aa		13.73	□□□□□ -0.21
PTPN7-205	ENST00000464870	TNMD	Q9H2S6	317 aa		13.73	□□□□□ -0.21
PTPN7-205	ENST00000464870	SETD4	Q9NVD3	440 aa		13.73	□□□□□ -0.21
PTPN7-205	ENST00000464870	PCDH10	Q9P2E7	1040 aa		13.73	□□□□□ -0.21
PTPN7-205	ENST00000464870	STK17A	Q9UEE5	414 aa		13.73	□□□□□ -0.21
PTPN7-205	ENST00000464870	DNM3	Q9UQ16	869 aa		13.73	□□□□□ -0.21
PTPN7-205	ENST00000464870	TRPC6	Q9Y210	931 aa		13.73	□□□□□ -0.21
PTPN7-205	ENST00000464870	RRN3P2	A6NIE6	340 aa		13.72	□□□□□ -0.21
PTPN7-205	ENST00000464870	PITPNM1	O00562	1244 aa		13.72	□□□□□ -0.21
PTPN7-205	ENST00000464870	CCL23	P55773	120 aa		13.72	□□□□□ -0.21
PTPN7-205	ENST00000464870	ZNF200	P98182	395 aa	Predicted RBP	13.72	□□□□□ -0.21
PTPN7-205	ENST00000464870	PPIG	Q13427	754 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
PTPN7-205	ENST00000464870	SV2B	Q7L1I2	683 aa		13.72	□□□□□ -0.21
PTPN7-205	ENST00000464870	C4orf19	Q8IY42	314 aa		13.72	□□□□□ -0.21
PTPN7-205	ENST00000464870	LARP4B	Q92615	738 aa	Known RBP	13.72	□□□□□ -0.21
PTPN7-205	ENST00000464870	SYAP1	Q96A49	352 aa	Predicted RBP	13.72	□□□□□ -0.21
PTPN7-205	ENST00000464870	NACC1	Q96RE7	527 aa		13.72	□□□□□ -0.21
PTPN7-205	ENST00000464870	SH2D3A	Q9BRG2	576 aa		13.72	□□□□□ -0.21
PTPN7-205	ENST00000464870	PRO3102	Q9H379	93 aa		13.72	□□□□□ -0.21
PTPN7-205	ENST00000464870	KBTBD4	Q9NVX7	518 aa		13.72	□□□□□ -0.21
PTPN7-205	ENST00000464870	MAFB	Q9Y5Q3	323 aa	Predicted RBP	13.72	□□□□□ -0.21
PTPN7-205	ENST00000464870	ALPK3	Q96L96	1907 aa		13.72	□□□□□ -0.21
PTPN7-205	ENST00000464870	UMODL1	Q5DID0	1318 aa		13.71	□□□□□ -0.21
PTPN7-205	ENST00000464870	IGSF9B	Q9UPX0	1349 aa		13.71	□□□□□ -0.21
PTPN7-205	ENST00000464870	SCN10A	Q9Y5Y9	1956 aa		13.71	□□□□□ -0.21
PTPN7-205	ENST00000464870	NPHP3-ACAD11	A0A0J9YXS1	232 aa		13.71	□□□□□ -0.21
PTPN7-205	ENST00000464870		A0A1W2PPC1	479 aa		13.71	□□□□□ -0.21
PTPN7-205	ENST00000464870	MYMK	A6NI61	221 aa		13.71	□□□□□ -0.21
PTPN7-205	ENST00000464870	TREH	O43280	583 aa		13.71	□□□□□ -0.21
PTPN7-205	ENST00000464870	HBP1	O60381	514 aa		13.71	□□□□□ -0.21
PTPN7-205	ENST00000464870	LYPLA2	O95372	231 aa		13.71	□□□□□ -0.21
PTPN7-205	ENST00000464870	EYA4	O95677	639 aa		13.71	□□□□□ -0.21
PTPN7-205	ENST00000464870	INSRR	P14616	1297 aa		13.71	□□□□□ -0.21
PTPN7-205	ENST00000464870	CSF2RA	P15509	400 aa		13.71	□□□□□ -0.21
PTPN7-205	ENST00000464870	MUT	P22033	750 aa		13.71	□□□□□ -0.21
PTPN7-205	ENST00000464870	HOXC8	P31273	242 aa		13.71	□□□□□ -0.21
PTPN7-205	ENST00000464870	SLC12A3	P55017	1021 aa		13.71	□□□□□ -0.21
PTPN7-205	ENST00000464870	NPEPPS	P55786	919 aa		13.71	□□□□□ -0.21
PTPN7-205	ENST00000464870	PRKCE	Q02156	737 aa		13.71	□□□□□ -0.21
PTPN7-205	ENST00000464870	CUL4B	Q13620	913 aa		13.71	□□□□□ -0.21
PTPN7-205	ENST00000464870	POSTN	Q15063	836 aa		13.71	□□□□□ -0.21
PTPN7-205	ENST00000464870	PLCB4	Q15147	1175 aa		13.71	□□□□□ -0.21
PTPN7-205	ENST00000464870	GRIK4	Q16099	956 aa		13.71	□□□□□ -0.21
PTPN7-205	ENST00000464870	PLA2G4F	Q68DD2	849 aa		13.71	□□□□□ -0.21
PTPN7-205	ENST00000464870	KANK3	Q6NY19	840 aa		13.71	□□□□□ -0.21
PTPN7-205	ENST00000464870	SERINC5	Q86VE9	423 aa		13.71	□□□□□ -0.21
PTPN7-205	ENST00000464870	CTAGE1	Q96RT6	745 aa		13.71	□□□□□ -0.21
PTPN7-205	ENST00000464870	BHMT2	Q9H2M3	363 aa		13.71	□□□□□ -0.21
PTPN7-205	ENST00000464870	CUEDC2	Q9H467	287 aa		13.71	□□□□□ -0.21
PTPN7-205	ENST00000464870	GTPBP6	O43824	516 aa	Predicted RBP	13.7	□□□□□ -0.22
PTPN7-205	ENST00000464870	SELP	P16109	830 aa		13.7	□□□□□ -0.22
PTPN7-205	ENST00000464870	YWHAB	P31946	246 aa	Known RBP	13.7	□□□□□ -0.22
PTPN7-205	ENST00000464870	IGBP1	P78318	339 aa		13.7	□□□□□ -0.22
PTPN7-205	ENST00000464870	ADAM17	P78536	824 aa		13.7	□□□□□ -0.22
PTPN7-205	ENST00000464870	HIC1	Q14526	733 aa		13.7	□□□□□ -0.22
PTPN7-205	ENST00000464870	ZSCAN23	Q3MJ62	389 aa		13.7	□□□□□ -0.22
PTPN7-205	ENST00000464870	ANO5	Q75V66	913 aa		13.7	□□□□□ -0.22
PTPN7-205	ENST00000464870	DYM	Q7RTS9	669 aa		13.7	□□□□□ -0.22
PTPN7-205	ENST00000464870	GPBP1	Q86WP2	473 aa		13.7	□□□□□ -0.22
PTPN7-205	ENST00000464870	RPUSD2	Q8IZ73	545 aa	Known RBP	13.7	□□□□□ -0.22
PTPN7-205	ENST00000464870	TDH	Q8IZJ6	230 aa		13.7	□□□□□ -0.22
PTPN7-205	ENST00000464870	SYT2	Q8N9I0	419 aa	Predicted RBP	13.7	□□□□□ -0.22
PTPN7-205	ENST00000464870	ATP8B4	Q8TF62	1192 aa		13.7	□□□□□ -0.22
PTPN7-205	ENST00000464870	LMBR1	Q8WVP7	490 aa		13.7	□□□□□ -0.22
PTPN7-205	ENST00000464870	DHX38	Q92620	1227 aa	Known RBP	13.7	□□□□□ -0.22
PTPN7-205	ENST00000464870	FAM167A	Q96KS9	214 aa		13.7	□□□□□ -0.22
PTPN7-205	ENST00000464870	RUSC1	Q9BVN2	902 aa		13.7	□□□□□ -0.22
PTPN7-205	ENST00000464870	WNT8A	Q9H1J5	351 aa		13.7	□□□□□ -0.22
PTPN7-205	ENST00000464870	POLD4	Q9HCU8	107 aa		13.7	□□□□□ -0.22
PTPN7-205	ENST00000464870	NRBP2	Q9NSY0	501 aa		13.7	□□□□□ -0.22
PTPN7-205	ENST00000464870	SYCE3	A1L190	88 aa		13.69	□□□□□ -0.22
PTPN7-205	ENST00000464870	ARHGEF35	A5YM69	484 aa		13.69	□□□□□ -0.22
PTPN7-205	ENST00000464870	DKC1	O60832	514 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
PTPN7-205	ENST00000464870	PARN	O95453	639 aa	Known RBP	13.69	□□□□□ -0.22
PTPN7-205	ENST00000464870	OAT	P04181	439 aa		13.69	□□□□□ -0.22
PTPN7-205	ENST00000464870	IQCF3	P0C7M6	154 aa		13.69	□□□□□ -0.22
PTPN7-205	ENST00000464870	CKB	P12277	381 aa		13.69	□□□□□ -0.22
PTPN7-205	ENST00000464870	CYP11B2	P19099	503 aa		13.69	□□□□□ -0.22
PTPN7-205	ENST00000464870	RFC2	P35250	354 aa		13.69	□□□□□ -0.22
PTPN7-205	ENST00000464870	CACNB1	Q02641	598 aa	Predicted RBP	13.69	□□□□□ -0.22
PTPN7-205	ENST00000464870	RBL2	Q08999	1139 aa		13.69	□□□□□ -0.22
PTPN7-205	ENST00000464870	RAD51AP2	Q09MP3	1159 aa		13.69	□□□□□ -0.22
PTPN7-205	ENST00000464870	DPYD	Q12882	1025 aa		13.69	□□□□□ -0.22
PTPN7-205	ENST00000464870	ARSH	Q5FYA8	562 aa		13.69	□□□□□ -0.22
PTPN7-205	ENST00000464870	XKR9	Q5GH70	373 aa		13.69	□□□□□ -0.22
PTPN7-205	ENST00000464870	XKR3	Q5GH77	459 aa		13.69	□□□□□ -0.22
PTPN7-205	ENST00000464870	ZNF484	Q5JVG2	852 aa		13.69	□□□□□ -0.22
PTPN7-205	ENST00000464870	HABP4	Q5JVS0	413 aa	Known RBP	13.69	□□□□□ -0.22
PTPN7-205	ENST00000464870	ISM2	Q6H9L7	571 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms