RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 MAGEB2O15479 319 aa14.57□□□□□ -0.08
XRN1-203ENST00000463916 QARSP47897 775 aaKnown RBP14.57□□□□□ -0.08
XRN1-203ENST00000463916 CALCRLQ16602 461 aa14.57□□□□□ -0.08
XRN1-203ENST00000463916 PLA2G4FQ68DD2 849 aa14.57□□□□□ -0.08
XRN1-203ENST00000463916 NCAPH2Q6IBW4 605 aa14.57□□□□□ -0.08
XRN1-203ENST00000463916 SLFN12Q8IYM2 578 aa14.57□□□□□ -0.08
XRN1-203ENST00000463916 USP38Q8NB14 1042 aa14.57□□□□□ -0.08
XRN1-203ENST00000463916 ZNF668Q96K58 619 aaPredicted RBP14.57□□□□□ -0.08
XRN1-203ENST00000463916 OSMRQ99650 979 aa14.57□□□□□ -0.08
XRN1-203ENST00000463916 FOXP1Q9H334 677 aaPredicted RBP14.57□□□□□ -0.08
XRN1-203ENST00000463916 INSL6Q9Y581 213 aa14.57□□□□□ -0.08
XRN1-203ENST00000463916 NEMFO60524 1076 aa14.56□□□□□ -0.08
XRN1-203ENST00000463916 MCM7P33993 719 aa14.56□□□□□ -0.08
XRN1-203ENST00000463916 NPEPPSP55786 919 aa14.56□□□□□ -0.08
XRN1-203ENST00000463916 NLRP11P59045 1033 aaKnown RBP14.56□□□□□ -0.08
XRN1-203ENST00000463916 TBC1D8BQ0IIM8 1120 aa14.56□□□□□ -0.08
XRN1-203ENST00000463916 GAS2L1Q99501 681 aaPredicted RBP14.56□□□□□ -0.08
XRN1-203ENST00000463916 ADAMTS10Q9H324 1103 aa14.56□□□□□ -0.08
XRN1-203ENST00000463916 TTC12Q9H892 705 aaPredicted RBP14.56□□□□□ -0.08
XRN1-203ENST00000463916 MTUS1Q9ULD2 1270 aa14.56□□□□□ -0.08
XRN1-203ENST00000463916 PCDHA12Q9UN75 941 aa14.56□□□□□ -0.08
XRN1-203ENST00000463916 BAG4O95429 457 aaKnown RBP14.56□□□□□ -0.08
XRN1-203ENST00000463916 P4HBP07237 508 aaKnown RBP14.56□□□□□ -0.08
XRN1-203ENST00000463916 IGFBP4P22692 258 aa14.56□□□□□ -0.08
XRN1-203ENST00000463916 TXKP42681 527 aa14.56□□□□□ -0.08
XRN1-203ENST00000463916 CRYBB1P53674 252 aaPredicted RBP14.56□□□□□ -0.08
XRN1-203ENST00000463916 NFX1Q12986 1120 aaKnown RBP14.56□□□□□ -0.08
XRN1-203ENST00000463916 PAK2Q13177 524 aa14.56□□□□□ -0.08
XRN1-203ENST00000463916 EPHA7Q15375 998 aa14.56□□□□□ -0.08
XRN1-203ENST00000463916 CRIPAKQ8N1N5 446 aa14.56□□□□□ -0.08
XRN1-203ENST00000463916 DYDC2Q96IM9 177 aa14.56□□□□□ -0.08
XRN1-203ENST00000463916 ERVK-5Q9HDB9 667 aa14.56□□□□□ -0.08
XRN1-203ENST00000463916 AKT3Q9Y243 479 aa14.56□□□□□ -0.08
XRN1-203ENST00000463916 IGKV6-21A0A0C4DH24 114 aa14.55□□□□□ -0.08
XRN1-203ENST00000463916 MGEA5O60502 916 aa14.55□□□□□ -0.08
XRN1-203ENST00000463916 SLITRK3O94933 977 aa14.55□□□□□ -0.08
XRN1-203ENST00000463916 CYP4A11Q02928 519 aa14.55□□□□□ -0.08
XRN1-203ENST00000463916 CTTNQ14247 550 aaKnown RBP14.55□□□□□ -0.08
XRN1-203ENST00000463916 NBR1Q14596 966 aa14.55□□□□□ -0.08
XRN1-203ENST00000463916 ZNF174Q15697 407 aa14.55□□□□□ -0.08
XRN1-203ENST00000463916 NOSTRINQ8IVI9 506 aa14.55□□□□□ -0.08
XRN1-203ENST00000463916 SLC17A8Q8NDX2 589 aa14.55□□□□□ -0.08
XRN1-203ENST00000463916 SP7Q8TDD2 431 aaPredicted RBP14.55□□□□□ -0.08
XRN1-203ENST00000463916 LXNQ9BS40 222 aa14.55□□□□□ -0.08
XRN1-203ENST00000463916 ST3GAL5Q9UNP4 418 aa14.55□□□□□ -0.08
XRN1-203ENST00000463916 TTC3P53804 2025 aa14.55□□□□□ -0.08
XRN1-203ENST00000463916 LPXNO60711 386 aa14.54□□□□□ -0.08
XRN1-203ENST00000463916 RPS6KA5O75582 802 aa14.54□□□□□ -0.08
XRN1-203ENST00000463916 U2AF2P26368 475 aaKnown RBP eCLIP14.54□□□□□ -0.08
XRN1-203ENST00000463916 TMOD1P28289 359 aa14.54□□□□□ -0.08
XRN1-203ENST00000463916 FAM228AQ86W67 206 aa14.54□□□□□ -0.08
XRN1-203ENST00000463916 YME1L1Q96TA2 773 aa14.54□□□□□ -0.08
XRN1-203ENST00000463916 HSD17B14Q9BPX1 270 aa14.54□□□□□ -0.08
XRN1-203ENST00000463916 C17orf80Q9BSJ5 609 aa14.54□□□□□ -0.08
XRN1-203ENST00000463916 TSPYL2Q9H2G4 693 aaPredicted RBP14.54□□□□□ -0.08
XRN1-203ENST00000463916 MAFO75444 373 aaPredicted RBP14.54□□□□□ -0.08
XRN1-203ENST00000463916 TOB1P50616 345 aaPredicted RBP14.54□□□□□ -0.08
XRN1-203ENST00000463916 GPC3P51654 580 aa14.54□□□□□ -0.08
XRN1-203ENST00000463916 ERVK-21P61565 698 aa14.54□□□□□ -0.08
XRN1-203ENST00000463916 CCDC85BQ15834 202 aaPredicted RBP14.54□□□□□ -0.08
XRN1-203ENST00000463916 C4orf19Q8IY42 314 aa14.54□□□□□ -0.08
XRN1-203ENST00000463916 PPM1EQ8WY54 764 aa14.54□□□□□ -0.08
XRN1-203ENST00000463916 MAP7D2Q96T17 732 aa14.54□□□□□ -0.08
XRN1-203ENST00000463916 EIF2AK1Q9BQI3 630 aaKnown RBP14.54□□□□□ -0.08
XRN1-203ENST00000463916 FTHL17Q9BXU8 183 aa14.54□□□□□ -0.08
XRN1-203ENST00000463916 CYP26B1Q9NR63 512 aa14.54□□□□□ -0.08
XRN1-203ENST00000463916 A0A087WWV3 80 aa14.53□□□□□ -0.08
XRN1-203ENST00000463916 POTEMA6NI47 508 aa14.53□□□□□ -0.08
XRN1-203ENST00000463916 CSDE1O75534 798 aaKnown RBP14.53□□□□□ -0.08
XRN1-203ENST00000463916 GJB2P29033 226 aa14.53□□□□□ -0.08
XRN1-203ENST00000463916 YWHABP31946 246 aaKnown RBP14.53□□□□□ -0.08
XRN1-203ENST00000463916 TPH2Q8IWU9 490 aa14.53□□□□□ -0.08
XRN1-203ENST00000463916 IL27Q8NEV9 243 aa14.53□□□□□ -0.08
XRN1-203ENST00000463916 TGS1Q96RS0 853 aaKnown RBP14.53□□□□□ -0.08
XRN1-203ENST00000463916 RC3H2Q9HBD1 1191 aaKnown RBP14.53□□□□□ -0.08
XRN1-203ENST00000463916 PRRC2BQ5JSZ5 2229 aaKnown RBP14.53□□□□□ -0.08
XRN1-203ENST00000463916 COL4A6Q14031 1691 aa14.53□□□□□ -0.08
XRN1-203ENST00000463916 EIF4BP23588 611 aaKnown RBP14.53□□□□□ -0.08
XRN1-203ENST00000463916 MCM2P49736 904 aa14.53□□□□□ -0.08
XRN1-203ENST00000463916 GRB10Q13322 594 aa14.53□□□□□ -0.08
XRN1-203ENST00000463916 KSR1Q8IVT5 923 aa14.53□□□□□ -0.08
XRN1-203ENST00000463916 C4orf32Q8N8J7 132 aa14.53□□□□□ -0.08
XRN1-203ENST00000463916 CEP170P1Q96L14 293 aa14.53□□□□□ -0.08
XRN1-203ENST00000463916 ZSWIM4Q9H7M6 989 aa14.53□□□□□ -0.08
XRN1-203ENST00000463916 PRDM6Q9NQX0 595 aa14.53□□□□□ -0.08
XRN1-203ENST00000463916 MTCH2Q9Y6C9 303 aa14.53□□□□□ -0.08
XRN1-203ENST00000463916 DGKIO75912 1065 aa14.52□□□□□ -0.09
XRN1-203ENST00000463916 LINC00271P0C7V0 271 aa14.52□□□□□ -0.09
XRN1-203ENST00000463916 FGFR4P22455 802 aa14.52□□□□□ -0.09
XRN1-203ENST00000463916 GNL2Q13823 731 aaKnown RBP14.52□□□□□ -0.09
XRN1-203ENST00000463916 TTC38Q5R3I4 469 aa14.52□□□□□ -0.09
XRN1-203ENST00000463916 GDPD5Q8WTR4 605 aa14.52□□□□□ -0.09
XRN1-203ENST00000463916 ZNF689Q96CS4 500 aaPredicted RBP14.52□□□□□ -0.09
XRN1-203ENST00000463916 ADAM2Q99965 735 aa14.52□□□□□ -0.09
XRN1-203ENST00000463916 BMP2KQ9NSY1 1161 aaPredicted RBP14.52□□□□□ -0.09
XRN1-203ENST00000463916 GPR182O15218 404 aa14.51□□□□□ -0.09
XRN1-203ENST00000463916 IBSPP21815 317 aaPredicted RBP14.51□□□□□ -0.09
XRN1-203ENST00000463916 TECP42680 631 aa14.51□□□□□ -0.09
XRN1-203ENST00000463916 DHX33Q9H6R0 707 aaKnown RBP14.51□□□□□ -0.09
XRN1-203ENST00000463916 RGS18Q9NS28 235 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms