RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 DLL1O00548 723 aa14.7□□□□□ -0.06
HDAC1-203ENST00000463172 ZNF862O60290 1169 aa14.7□□□□□ -0.06
HDAC1-203ENST00000463172 P4HBP07237 508 aaKnown RBP14.7□□□□□ -0.06
HDAC1-203ENST00000463172 GRB10Q13322 594 aa14.7□□□□□ -0.06
HDAC1-203ENST00000463172 CALCRLQ16602 461 aa14.7□□□□□ -0.06
HDAC1-203ENST00000463172 UGCGQ16739 394 aa14.7□□□□□ -0.06
HDAC1-203ENST00000463172 KIZQ2M2Z5 673 aa14.7□□□□□ -0.06
HDAC1-203ENST00000463172 MTERF2Q49AM1 385 aa14.7□□□□□ -0.06
HDAC1-203ENST00000463172 B3GNT9Q6UX72 402 aa14.7□□□□□ -0.06
HDAC1-203ENST00000463172 OTUD6AQ7L8S5 288 aa14.7□□□□□ -0.06
HDAC1-203ENST00000463172 ATXN2LQ8WWM7 1075 aaKnown RBP14.7□□□□□ -0.06
HDAC1-203ENST00000463172 OSBPL7Q9BZF2 842 aa14.7□□□□□ -0.06
HDAC1-203ENST00000463172 UNC80Q8N2C7 3258 aa14.7□□□□□ -0.06
HDAC1-203ENST00000463172 ADGRA3Q8IWK6 1321 aa14.69□□□□□ -0.06
HDAC1-203ENST00000463172 COL4A4P53420 1690 aaPredicted RBP14.69□□□□□ -0.06
HDAC1-203ENST00000463172 PRUNE2Q8WUY3 3088 aa14.69□□□□□ -0.06
HDAC1-203ENST00000463172 BTBD18B2RXH4 712 aa14.69□□□□□ -0.06
HDAC1-203ENST00000463172 RFXAPO00287 272 aa14.69□□□□□ -0.06
HDAC1-203ENST00000463172 NEMFO60524 1076 aa14.69□□□□□ -0.06
HDAC1-203ENST00000463172 ARHGEF15O94989 841 aa14.69□□□□□ -0.06
HDAC1-203ENST00000463172 VTNP04004 478 aa14.69□□□□□ -0.06
HDAC1-203ENST00000463172 ZSCAN20P17040 1043 aaPredicted RBP14.69□□□□□ -0.06
HDAC1-203ENST00000463172 MCM2P49736 904 aa14.69□□□□□ -0.06
HDAC1-203ENST00000463172 CLCN3P51790 818 aa14.69□□□□□ -0.06
HDAC1-203ENST00000463172 FOSBP53539 338 aa14.69□□□□□ -0.06
HDAC1-203ENST00000463172 BTG3Q14201 252 aaPredicted RBP14.69□□□□□ -0.06
HDAC1-203ENST00000463172 EPHA7Q15375 998 aa14.69□□□□□ -0.06
HDAC1-203ENST00000463172 NCAPH2Q6IBW4 605 aa14.69□□□□□ -0.06
HDAC1-203ENST00000463172 POTEDQ86YR6 584 aa14.69□□□□□ -0.06
HDAC1-203ENST00000463172 BANK1Q8NDB2 785 aa14.69□□□□□ -0.06
HDAC1-203ENST00000463172 GDPD5Q8WTR4 605 aa14.69□□□□□ -0.06
HDAC1-203ENST00000463172 NLRP7Q8WX94 980 aa14.69□□□□□ -0.06
HDAC1-203ENST00000463172 SLC7A3Q8WY07 619 aa14.69□□□□□ -0.06
HDAC1-203ENST00000463172 OSMRQ99650 979 aa14.69□□□□□ -0.06
HDAC1-203ENST00000463172 INO80BQ9C086 356 aaPredicted RBP14.69□□□□□ -0.06
HDAC1-203ENST00000463172 ERVK-5Q9HDB9 667 aa14.69□□□□□ -0.06
HDAC1-203ENST00000463172 VAV3Q9UKW4 847 aa14.69□□□□□ -0.06
HDAC1-203ENST00000463172 PCDHA12Q9UN75 941 aa14.69□□□□□ -0.06
HDAC1-203ENST00000463172 NOC2LQ9Y3T9 749 aaKnown RBP14.69□□□□□ -0.06
HDAC1-203ENST00000463172 PCDHB7Q9Y5E2 793 aa14.69□□□□□ -0.06
HDAC1-203ENST00000463172 EYSQ5T1H1 3165 aa14.68□□□□□ -0.06
HDAC1-203ENST00000463172 EPOPA6NHQ4 379 aa14.68□□□□□ -0.06
HDAC1-203ENST00000463172 RB1P06400 928 aa14.68□□□□□ -0.06
HDAC1-203ENST00000463172 SARSP49591 514 aaKnown RBP14.68□□□□□ -0.06
HDAC1-203ENST00000463172 NLRP11P59045 1033 aaKnown RBP14.68□□□□□ -0.06
HDAC1-203ENST00000463172 ORC2Q13416 577 aaPredicted RBP14.68□□□□□ -0.06
HDAC1-203ENST00000463172 TARBP2Q15633 366 aaKnown RBP14.68□□□□□ -0.06
HDAC1-203ENST00000463172 TMEM266Q2M3C6 531 aa14.68□□□□□ -0.06
HDAC1-203ENST00000463172 EPC2Q52LR7 807 aa14.68□□□□□ -0.06
HDAC1-203ENST00000463172 TJAP1Q5JTD0 557 aa14.68□□□□□ -0.06
HDAC1-203ENST00000463172 SLC24A5Q71RS6 500 aa14.68□□□□□ -0.06
HDAC1-203ENST00000463172 TMEM192Q8IY95 271 aa14.68□□□□□ -0.06
HDAC1-203ENST00000463172 CMTR2Q8IYT2 770 aaKnown RBP14.68□□□□□ -0.06
HDAC1-203ENST00000463172 LRRC71Q8N4P6 559 aa14.68□□□□□ -0.06
HDAC1-203ENST00000463172 NEK9Q8TD19 979 aa14.68□□□□□ -0.06
HDAC1-203ENST00000463172 TNFRSF25Q93038 417 aa14.68□□□□□ -0.06
HDAC1-203ENST00000463172 CCDC43Q96MW1 224 aaKnown RBP14.68□□□□□ -0.06
HDAC1-203ENST00000463172 PPP1R16BQ96T49 567 aa14.68□□□□□ -0.06
HDAC1-203ENST00000463172 C17orf80Q9BSJ5 609 aa14.68□□□□□ -0.06
HDAC1-203ENST00000463172 C11orf84Q9BUA3 381 aaPredicted RBP14.68□□□□□ -0.06
HDAC1-203ENST00000463172 GCOM2Q9BZD3 368 aaPredicted RBP14.68□□□□□ -0.06
HDAC1-203ENST00000463172 FOXP1Q9H334 677 aaPredicted RBP14.68□□□□□ -0.06
HDAC1-203ENST00000463172 ZSWIM4Q9H7M6 989 aa14.68□□□□□ -0.06
HDAC1-203ENST00000463172 NOL7Q9UMY1 257 aaKnown RBP14.68□□□□□ -0.06
HDAC1-203ENST00000463172 ST3GAL5Q9UNP4 418 aa14.68□□□□□ -0.06
HDAC1-203ENST00000463172 COG5Q9UP83 839 aa14.68□□□□□ -0.06
HDAC1-203ENST00000463172 HOXA2O43364 376 aa14.67□□□□□ -0.06
HDAC1-203ENST00000463172 GAS2O43903 313 aaKnown RBP14.67□□□□□ -0.06
HDAC1-203ENST00000463172 DTNBO60941 627 aa14.67□□□□□ -0.06
HDAC1-203ENST00000463172 GPR32O75388 356 aa14.67□□□□□ -0.06
HDAC1-203ENST00000463172 DGKIO75912 1065 aa14.67□□□□□ -0.06
HDAC1-203ENST00000463172 EIF4BP23588 611 aaKnown RBP14.67□□□□□ -0.06
HDAC1-203ENST00000463172 CTNNB1P35222 781 aa14.67□□□□□ -0.06
HDAC1-203ENST00000463172 RFC5P40937 340 aa14.67□□□□□ -0.06
HDAC1-203ENST00000463172 MRPS5P82675 430 aaKnown RBP14.67□□□□□ -0.06
HDAC1-203ENST00000463172 GPM6BQ13491 265 aa14.67□□□□□ -0.06
HDAC1-203ENST00000463172 C4orf19Q8IY42 314 aa14.67□□□□□ -0.06
HDAC1-203ENST00000463172 LINC01465Q8N7H1 131 aa14.67□□□□□ -0.06
HDAC1-203ENST00000463172 HAS1Q92839 578 aa14.67□□□□□ -0.06
HDAC1-203ENST00000463172 CEP170P1Q96L14 293 aa14.67□□□□□ -0.06
HDAC1-203ENST00000463172 ADAM2Q99965 735 aa14.67□□□□□ -0.06
HDAC1-203ENST00000463172 LXNQ9BS40 222 aa14.67□□□□□ -0.06
HDAC1-203ENST00000463172 CYP26B1Q9NR63 512 aa14.67□□□□□ -0.06
HDAC1-203ENST00000463172 RGS18Q9NS28 235 aa14.67□□□□□ -0.06
HDAC1-203ENST00000463172 H3BNC9 293 aa14.66□□□□□ -0.06
HDAC1-203ENST00000463172 EML1O00423 815 aa14.66□□□□□ -0.06
HDAC1-203ENST00000463172 MAFO75444 373 aaPredicted RBP14.66□□□□□ -0.06
HDAC1-203ENST00000463172 SFPQP23246 707 aaKnown RBP eCLIP14.66□□□□□ -0.06
HDAC1-203ENST00000463172 GPC3P51654 580 aa14.66□□□□□ -0.06
HDAC1-203ENST00000463172 POLGP54098 1239 aaPredicted RBP14.66□□□□□ -0.06
HDAC1-203ENST00000463172 GUCY1B3Q02153 619 aa14.66□□□□□ -0.06
HDAC1-203ENST00000463172 TIGD5Q53EQ6 642 aa14.66□□□□□ -0.06
HDAC1-203ENST00000463172 EARS2Q5JPH6 523 aaKnown RBP14.66□□□□□ -0.06
HDAC1-203ENST00000463172 ZNF410Q86VK4 478 aa14.66□□□□□ -0.06
HDAC1-203ENST00000463172 FAM228AQ86W67 206 aa14.66□□□□□ -0.06
HDAC1-203ENST00000463172 FBXO18Q8NFZ0 1043 aa14.66□□□□□ -0.06
HDAC1-203ENST00000463172 TCP11Q8WWU5 503 aa14.66□□□□□ -0.06
HDAC1-203ENST00000463172 ZNF689Q96CS4 500 aaPredicted RBP14.66□□□□□ -0.06
HDAC1-203ENST00000463172 KIF2CQ99661 725 aa14.66□□□□□ -0.06
HDAC1-203ENST00000463172 PLVAPQ9BX97 442 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms