RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-223ENST00000463004 RUFY4Q6ZNE9 571 aa12.75□□□□□ -0.37
RBM39-223ENST00000463004 METTL23Q86XA0 190 aa12.75□□□□□ -0.37
RBM39-223ENST00000463004 NHEJ1Q9H9Q4 299 aaPredicted RBP12.75□□□□□ -0.37
RBM39-223ENST00000463004 HOMER3Q9NSC5 361 aa12.75□□□□□ -0.37
RBM39-223ENST00000463004 FAM198AQ9UFP1 575 aa12.75□□□□□ -0.37
RBM39-223ENST00000463004 RHOXF2BP0C7M4 288 aa12.75□□□□□ -0.37
RBM39-223ENST00000463004 RPS6P62753 249 aaKnown RBP12.75□□□□□ -0.37
RBM39-223ENST00000463004 PPATQ06203 517 aa12.75□□□□□ -0.37
RBM39-223ENST00000463004 KCNH2Q12809 1159 aa12.75□□□□□ -0.37
RBM39-223ENST00000463004 LAMC2Q13753 1193 aa12.75□□□□□ -0.37
RBM39-223ENST00000463004 BTNL9Q6UXG8 535 aa12.75□□□□□ -0.37
RBM39-223ENST00000463004 TRIM72Q6ZMU5 477 aa12.75□□□□□ -0.37
RBM39-223ENST00000463004 EEPD1Q7L9B9 569 aa12.75□□□□□ -0.37
RBM39-223ENST00000463004 MAP7D3Q8IWC1 876 aa12.75□□□□□ -0.37
RBM39-223ENST00000463004 RHOXF2Q9BQY4 288 aa12.75□□□□□ -0.37
RBM39-223ENST00000463004 POLR3FQ9H1D9 316 aaPredicted RBP12.75□□□□□ -0.37
RBM39-223ENST00000463004 RRAGDQ9NQL2 400 aaPredicted RBP12.75□□□□□ -0.37
RBM39-223ENST00000463004 ANO9A1A5B4 782 aa12.75□□□□□ -0.37
RBM39-223ENST00000463004 CYP3A4P08684 503 aa12.75□□□□□ -0.37
RBM39-223ENST00000463004 DSG3P32926 999 aa12.75□□□□□ -0.37
RBM39-223ENST00000463004 VAMP7P51809 220 aa12.75□□□□□ -0.37
RBM39-223ENST00000463004 NBPF9Q3BBW0 867 aa12.75□□□□□ -0.37
RBM39-223ENST00000463004 KRT39Q6A163 491 aa12.75□□□□□ -0.37
RBM39-223ENST00000463004 CERS5Q8N5B7 392 aa12.75□□□□□ -0.37
RBM39-223ENST00000463004 RABGGTAQ92696 567 aa12.75□□□□□ -0.37
RBM39-223ENST00000463004 CCDC114Q96M63 670 aa12.75□□□□□ -0.37
RBM39-223ENST00000463004 GCOM2Q9BZD3 368 aaPredicted RBP12.75□□□□□ -0.37
RBM39-223ENST00000463004 KBTBD4Q9NVX7 518 aa12.75□□□□□ -0.37
RBM39-223ENST00000463004 TXNP10599 105 aaKnown RBP12.74□□□□□ -0.37
RBM39-223ENST00000463004 TGFB3P10600 412 aa12.74□□□□□ -0.37
RBM39-223ENST00000463004 VEGFAP15692 232 aaPredicted RBP12.74□□□□□ -0.37
RBM39-223ENST00000463004 TATDN1Q6P1N9 297 aa12.74□□□□□ -0.37
RBM39-223ENST00000463004 PROCA1Q8NCQ7 364 aaPredicted RBP12.74□□□□□ -0.37
RBM39-223ENST00000463004 DESI2Q9BSY9 194 aa12.74□□□□□ -0.37
RBM39-223ENST00000463004 SCINQ9Y6U3 715 aa12.74□□□□□ -0.37
RBM39-223ENST00000463004 VCAM1P19320 739 aa12.74□□□□□ -0.37
RBM39-223ENST00000463004 TOB1P50616 345 aaPredicted RBP12.74□□□□□ -0.37
RBM39-223ENST00000463004 TAF1CQ15572 869 aaPredicted RBP12.74□□□□□ -0.37
RBM39-223ENST00000463004 ZNF710Q8N1W2 664 aa12.74□□□□□ -0.37
RBM39-223ENST00000463004 GPD1LQ8N335 351 aa12.74□□□□□ -0.37
RBM39-223ENST00000463004 MORC4Q8TE76 937 aa12.74□□□□□ -0.37
RBM39-223ENST00000463004 MMS19Q96T76 1030 aa12.74□□□□□ -0.37
RBM39-223ENST00000463004 FAM204AQ9H8W3 233 aa12.74□□□□□ -0.37
RBM39-223ENST00000463004 UBE2TQ9NPD8 197 aaPredicted RBP12.74□□□□□ -0.37
RBM39-223ENST00000463004 ABHD10Q9NUJ1 306 aa12.74□□□□□ -0.37
RBM39-223ENST00000463004 BCCIPQ9P287 314 aaKnown RBP eCLIP12.74□□□□□ -0.37
RBM39-223ENST00000463004 NRBP1Q9UHY1 535 aa12.74□□□□□ -0.37
RBM39-223ENST00000463004 CCL15-CCL14A0A0B4J2E2 113 aa12.74□□□□□ -0.37
RBM39-223ENST00000463004 ERCC3P19447 782 aa12.74□□□□□ -0.37
RBM39-223ENST00000463004 KIF11P52732 1056 aa12.74□□□□□ -0.37
RBM39-223ENST00000463004 MAP2K1Q02750 393 aaPredicted RBP12.74□□□□□ -0.37
RBM39-223ENST00000463004 ST3GAL1Q11201 340 aa12.74□□□□□ -0.37
RBM39-223ENST00000463004 CCL15Q16663 113 aa12.74□□□□□ -0.37
RBM39-223ENST00000463004 CATSPER4Q7RTX7 472 aa12.74□□□□□ -0.37
RBM39-223ENST00000463004 PCIF1Q9H4Z3 704 aa12.74□□□□□ -0.37
RBM39-223ENST00000463004 KCNH7Q9NS40 1196 aa12.74□□□□□ -0.37
RBM39-223ENST00000463004 PYCARDQ9ULZ3 195 aa12.74□□□□□ -0.37
RBM39-223ENST00000463004 CAPN11Q9UMQ6 739 aa12.74□□□□□ -0.37
RBM39-223ENST00000463004 RRN3P2A6NIE6 340 aa12.74□□□□□ -0.37
RBM39-223ENST00000463004 HBP1O60381 514 aa12.74□□□□□ -0.37
RBM39-223ENST00000463004 MAPTP10636 758 aaKnown RBP12.74□□□□□ -0.37
RBM39-223ENST00000463004 EIF4A3P38919 411 aaKnown RBP12.74□□□□□ -0.37
RBM39-223ENST00000463004 IER5Q5VY09 327 aa12.74□□□□□ -0.37
RBM39-223ENST00000463004 PLIN4Q96Q06 1357 aa12.74□□□□□ -0.37
RBM39-223ENST00000463004 MYMKA6NI61 221 aa12.73□□□□□ -0.37
RBM39-223ENST00000463004 MSH4O15457 936 aa12.73□□□□□ -0.37
RBM39-223ENST00000463004 ATP8B1O43520 1251 aa12.73□□□□□ -0.37
RBM39-223ENST00000463004 GGPS1O95749 300 aa12.73□□□□□ -0.37
RBM39-223ENST00000463004 CYP11B2P19099 503 aa12.73□□□□□ -0.37
RBM39-223ENST00000463004 GPRC5DQ9NZD1 345 aa12.73□□□□□ -0.37
RBM39-223ENST00000463004 PIK3CDO00329 1044 aa12.73□□□□□ -0.37
RBM39-223ENST00000463004 LPXNO60711 386 aa12.73□□□□□ -0.37
RBM39-223ENST00000463004 APBA1Q02410 837 aa12.73□□□□□ -0.37
RBM39-223ENST00000463004 LONRF2Q1L5Z9 754 aa12.73□□□□□ -0.37
RBM39-223ENST00000463004 ZNF667Q5HYK9 610 aa12.73□□□□□ -0.37
RBM39-223ENST00000463004 SRGAP1Q7Z6B7 1085 aa12.73□□□□□ -0.37
RBM39-223ENST00000463004 TSC1Q92574 1164 aa12.73□□□□□ -0.37
RBM39-223ENST00000463004 AGBL1Q96MI9 1066 aa12.73□□□□□ -0.37
RBM39-223ENST00000463004 RANBP17Q9H2T7 1088 aaKnown RBP12.73□□□□□ -0.37
RBM39-223ENST00000463004 SLC16A4O15374 487 aa12.73□□□□□ -0.37
RBM39-223ENST00000463004 SORBS3O60504 671 aa12.73□□□□□ -0.37
RBM39-223ENST00000463004 MAPK4P31152 587 aa12.73□□□□□ -0.37
RBM39-223ENST00000463004 TFAMQ00059 246 aaKnown RBP12.73□□□□□ -0.37
RBM39-223ENST00000463004 SND1Q7KZF4 910 aaKnown RBP eCLIP12.73□□□□□ -0.37
RBM39-223ENST00000463004 ARMCX2Q7L311 632 aa12.73□□□□□ -0.37
RBM39-223ENST00000463004 IFT81Q8WYA0 676 aa12.73□□□□□ -0.37
RBM39-223ENST00000463004 SNX25Q9H3E2 840 aa12.73□□□□□ -0.37
RBM39-223ENST00000463004 SPTLC3Q9NUV7 552 aa12.73□□□□□ -0.37
RBM39-223ENST00000463004 OGFRQ9NZT2 677 aa12.73□□□□□ -0.37
RBM39-223ENST00000463004 NWD2Q9ULI1 1742 aa12.73□□□□□ -0.37
RBM39-223ENST00000463004 MIF4GDA9UHW6 222 aaKnown RBP12.72□□□□□ -0.37
RBM39-223ENST00000463004 TNPO2O14787 897 aaKnown RBP12.72□□□□□ -0.37
RBM39-223ENST00000463004 NKRFO15226 690 aaKnown RBP eCLIP12.72□□□□□ -0.37
RBM39-223ENST00000463004 SRGAP2CP0DJJ0 459 aa12.72□□□□□ -0.37
RBM39-223ENST00000463004 ECE1P42892 770 aa12.72□□□□□ -0.37
RBM39-223ENST00000463004 FKBP1BP68106 108 aa12.72□□□□□ -0.37
RBM39-223ENST00000463004 NLRP4Q96MN2 994 aa12.72□□□□□ -0.37
RBM39-223ENST00000463004 IQCGQ9H095 443 aaKnown RBP12.72□□□□□ -0.37
RBM39-223ENST00000463004 DNAJC12Q9UKB3 198 aa12.72□□□□□ -0.37
RBM39-223ENST00000463004 NUB1Q9Y5A7 615 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms