RNA–Protein interactions for RNA: ENST00000462968.2

CD46-210, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 473 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-210ENST00000462968 CRIP3Q6Q6R5 217 aa3.77□□□□□ -1.81
CD46-210ENST00000462968 CELF1Q92879 486 aaKnown RBP3.77□□□□□ -1.81
CD46-210ENST00000462968 ZBED3Q96IU2 234 aaPredicted RBP3.77□□□□□ -1.81
CD46-210ENST00000462968 SIN3AQ96ST3 1273 aa3.77□□□□□ -1.81
CD46-210ENST00000462968 PRDM14Q9GZV8 571 aa3.77□□□□□ -1.81
CD46-210ENST00000462968 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.77□□□□□ -1.81
CD46-210ENST00000462968 MIR1-1HGQ9H1L0 117 aa3.77□□□□□ -1.81
CD46-210ENST00000462968 DCTN4Q9UJW0 460 aa3.77□□□□□ -1.81
CD46-210ENST00000462968 OGDHLQ9ULD0 1010 aa3.77□□□□□ -1.81
CD46-210ENST00000462968 GABRQQ9UN88 632 aa3.77□□□□□ -1.81
CD46-210ENST00000462968 TTF2Q9UNY4 1162 aaKnown RBP3.77□□□□□ -1.81
CD46-210ENST00000462968 GPR55Q9Y2T6 319 aaPredicted RBP3.77□□□□□ -1.81
CD46-210ENST00000462968 TAF6LQ9Y6J9 622 aa3.77□□□□□ -1.81
CD46-210ENST00000462968 ZNF646O15015 1829 aaPredicted RBP3.77□□□□□ -1.81
CD46-210ENST00000462968 CEMIPQ8WUJ3 1361 aa3.76□□□□□ -1.81
CD46-210ENST00000462968 ZNF804BA4D1E1 1349 aa3.76□□□□□ -1.81
CD46-210ENST00000462968 PFASO15067 1338 aa3.76□□□□□ -1.81
CD46-210ENST00000462968 SH3TC1Q8TE82 1336 aa3.76□□□□□ -1.81
CD46-210ENST00000462968 MYO1BO43795 1136 aa3.76□□□□□ -1.81
CD46-210ENST00000462968 COL6A1P12109 1028 aa3.76□□□□□ -1.81
CD46-210ENST00000462968 PRKCAP17252 672 aa3.76□□□□□ -1.81
CD46-210ENST00000462968 PLCG1P19174 1290 aa3.76□□□□□ -1.81
CD46-210ENST00000462968 TNNI2P48788 182 aa3.76□□□□□ -1.81
CD46-210ENST00000462968 RPS8P62241 208 aaKnown RBP3.76□□□□□ -1.81
CD46-210ENST00000462968 FOXO4P98177 505 aa3.76□□□□□ -1.81
CD46-210ENST00000462968 VGLL4Q14135 290 aa3.76□□□□□ -1.81
CD46-210ENST00000462968 SF3B3Q15393 1217 aaKnown RBP3.76□□□□□ -1.81
CD46-210ENST00000462968 DLGAP5Q15398 846 aa3.76□□□□□ -1.81
CD46-210ENST00000462968 TARBP2Q15633 366 aaKnown RBP3.76□□□□□ -1.81
CD46-210ENST00000462968 LRRC26Q2I0M4 334 aa3.76□□□□□ -1.81
CD46-210ENST00000462968 ANKRD23Q86SG2 305 aa3.76□□□□□ -1.81
CD46-210ENST00000462968 ZFPM1Q8IX07 1006 aa3.76□□□□□ -1.81
CD46-210ENST00000462968 RETREG2Q8NC44 543 aa3.76□□□□□ -1.81
CD46-210ENST00000462968 TRMT112Q9UI30 125 aaKnown RBP3.76□□□□□ -1.81
CD46-210ENST00000462968 RRP7AQ9Y3A4 280 aaKnown RBP3.76□□□□□ -1.81
CD46-210ENST00000462968 PMF1-BGLAPU3KQ54 211 aa3.76□□□□□ -1.81
CD46-210ENST00000462968 UBR2Q8IWV8 1755 aa3.76□□□□□ -1.81
CD46-210ENST00000462968 FAM86C2PA6NEL3 165 aa3.75□□□□□ -1.81
CD46-210ENST00000462968 PI4K2BG5E9Z4 385 aa3.75□□□□□ -1.81
CD46-210ENST00000462968 PDHXO00330 501 aa3.75□□□□□ -1.81
CD46-210ENST00000462968 TNPO2O14787 897 aaKnown RBP3.75□□□□□ -1.81
CD46-210ENST00000462968 SYPP08247 313 aa3.75□□□□□ -1.81
CD46-210ENST00000462968 U2AF1L5P0DN76 240 aaPredicted RBP3.75□□□□□ -1.81
CD46-210ENST00000462968 MYL6BP14649 208 aa3.75□□□□□ -1.81
CD46-210ENST00000462968 ATF2P15336 505 aa3.75□□□□□ -1.81
CD46-210ENST00000462968 TFE3P19532 575 aaPredicted RBP3.75□□□□□ -1.81
CD46-210ENST00000462968 LIG3P49916 1009 aa3.75□□□□□ -1.81
CD46-210ENST00000462968 CYP4F8P98187 520 aa3.75□□□□□ -1.81
CD46-210ENST00000462968 U2AF1Q01081 240 aaKnown RBP eCLIP3.75□□□□□ -1.812e-11■■■■□ 23.4
CD46-210ENST00000462968 RASA3Q14644 834 aa3.75□□□□□ -1.81
CD46-210ENST00000462968 NR1I3Q14994 352 aa3.75□□□□□ -1.81
CD46-210ENST00000462968 HSP90AB3PQ58FF7 597 aa3.75□□□□□ -1.81
CD46-210ENST00000462968 C9orf50Q5SZB4 431 aa3.75□□□□□ -1.81
CD46-210ENST00000462968 ZC3H14Q6PJT7 736 aaKnown RBP3.75□□□□□ -1.81
CD46-210ENST00000462968 NLRP10Q86W26 655 aa3.75□□□□□ -1.81
CD46-210ENST00000462968 ERO1BQ86YB8 467 aa3.75□□□□□ -1.81
CD46-210ENST00000462968 CARFQ8N187 725 aa3.75□□□□□ -1.81
CD46-210ENST00000462968 ZBTB38Q8NAP3 1195 aaPredicted RBP3.75□□□□□ -1.81
CD46-210ENST00000462968 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.75□□□□□ -1.81
CD46-210ENST00000462968 CCDC74BQ96LY2 380 aa3.75□□□□□ -1.81
CD46-210ENST00000462968 MXD3Q9BW11 206 aa3.75□□□□□ -1.81
CD46-210ENST00000462968 ASCC2Q9H1I8 757 aaPredicted RBP3.75□□□□□ -1.81
CD46-210ENST00000462968 XIRP2A4UGR9 3374 aa3.74□□□□□ -1.81
CD46-210ENST00000462968 COL3A1P02461 1466 aaPredicted RBP3.74□□□□□ -1.81
CD46-210ENST00000462968 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.74□□□□□ -1.81
CD46-210ENST00000462968 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.74□□□□□ -1.81
CD46-210ENST00000462968 A0A1W2PQ45 241 aaPredicted RBP3.74□□□□□ -1.81
CD46-210ENST00000462968 A0A1W2PQY0 241 aa3.74□□□□□ -1.81
CD46-210ENST00000462968 SSU72P8A0A1W2PR75 194 aa3.74□□□□□ -1.81
CD46-210ENST00000462968 CLRN2A0PK11 232 aa3.74□□□□□ -1.81
CD46-210ENST00000462968 HMGCRP04035 888 aa3.74□□□□□ -1.81
CD46-210ENST00000462968 GJA9P57773 515 aa3.74□□□□□ -1.81
CD46-210ENST00000462968 PPIL2Q13356 520 aa3.74□□□□□ -1.81
CD46-210ENST00000462968 TNFAIP1Q13829 316 aa3.74□□□□□ -1.81
CD46-210ENST00000462968 CDSNQ15517 529 aa3.74□□□□□ -1.81
CD46-210ENST00000462968 CCDC85BQ15834 202 aaPredicted RBP3.74□□□□□ -1.81
CD46-210ENST00000462968 TTLL5Q6EMB2 1281 aa3.74□□□□□ -1.81
CD46-210ENST00000462968 ALG1LQ6GMV1 187 aa3.74□□□□□ -1.81
CD46-210ENST00000462968 ERMP1Q7Z2K6 904 aa3.74□□□□□ -1.81
CD46-210ENST00000462968 TMC3Q7Z5M5 1100 aa3.74□□□□□ -1.81
CD46-210ENST00000462968 SPRED1Q7Z699 444 aa3.74□□□□□ -1.81
CD46-210ENST00000462968 MORC1Q86VD1 984 aa3.74□□□□□ -1.81
CD46-210ENST00000462968 KIAA0825Q8IV33 1275 aa3.74□□□□□ -1.81
CD46-210ENST00000462968 DVL3Q92997 716 aaPredicted RBP3.74□□□□□ -1.81
CD46-210ENST00000462968 COA7Q96BR5 231 aa3.74□□□□□ -1.81
CD46-210ENST00000462968 LOXL4Q96JB6 756 aa3.74□□□□□ -1.81
CD46-210ENST00000462968 PARK7Q99497 189 aaKnown RBP3.74□□□□□ -1.81
CD46-210ENST00000462968 SSBP3Q9BWW4 388 aaPredicted RBP3.74□□□□□ -1.81
CD46-210ENST00000462968 COA1Q9GZY4 146 aa3.74□□□□□ -1.81
CD46-210ENST00000462968 PCED1AQ9H1Q7 454 aa3.74□□□□□ -1.81
CD46-210ENST00000462968 VEZTQ9HBM0 779 aa3.74□□□□□ -1.81
CD46-210ENST00000462968 ERVK13-1Q9NX77 482 aa3.74□□□□□ -1.81
CD46-210ENST00000462968 PLA2G2DQ9UNK4 145 aa3.74□□□□□ -1.81
CD46-210ENST00000462968 XDHP47989 1333 aa3.73□□□□□ -1.81
CD46-210ENST00000462968 POLR2AP24928 1970 aaKnown RBP3.73□□□□□ -1.81
CD46-210ENST00000462968 SOWAHDA6NJG2 315 aa3.73□□□□□ -1.81
CD46-210ENST00000462968 CHURC1-FNTBB4DL54 471 aa3.73□□□□□ -1.81
CD46-210ENST00000462968 DIAPH1O60610 1272 aaKnown RBP3.73□□□□□ -1.81
CD46-210ENST00000462968 KRT37O76014 449 aa3.73□□□□□ -1.81
CD46-210ENST00000462968 PLATP00750 562 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms