RNA–Protein interactions for RNA: ENST00000462673.1

USP4-207, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 709 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-207ENST00000462673 KLRC1P26715 233 aa8.64□□□□□ -1.03
USP4-207ENST00000462673 YWHABP31946 246 aaKnown RBP8.64□□□□□ -1.03
USP4-207ENST00000462673 CCT6AP40227 531 aaKnown RBP8.64□□□□□ -1.03
USP4-207ENST00000462673 RFC5P40937 340 aa8.64□□□□□ -1.03
USP4-207ENST00000462673 IRX5P78411 483 aaPredicted RBP8.64□□□□□ -1.03
USP4-207ENST00000462673 TBC1D8BQ0IIM8 1120 aa8.64□□□□□ -1.03
USP4-207ENST00000462673 FAAP100Q0VG06 881 aa8.64□□□□□ -1.03
USP4-207ENST00000462673 RESTQ13127 1097 aa8.64□□□□□ -1.03
USP4-207ENST00000462673 PLCB4Q15147 1175 aa8.64□□□□□ -1.03
USP4-207ENST00000462673 GRIK4Q16099 956 aa8.64□□□□□ -1.03
USP4-207ENST00000462673 TPD52L1Q16890 204 aaPredicted RBP8.64□□□□□ -1.03
USP4-207ENST00000462673 ANO6Q4KMQ2 910 aa8.64□□□□□ -1.03
USP4-207ENST00000462673 CEP135Q66GS9 1140 aa8.64□□□□□ -1.03
USP4-207ENST00000462673 SARM1Q6SZW1 724 aa8.64□□□□□ -1.03
USP4-207ENST00000462673 CCDC186Q7Z3E2 898 aa8.64□□□□□ -1.03
USP4-207ENST00000462673 CCDC60Q8IWA6 550 aaPredicted RBP8.64□□□□□ -1.03
USP4-207ENST00000462673 C4orf32Q8N8J7 132 aa8.64□□□□□ -1.03
USP4-207ENST00000462673 IGSF22Q8N9C0 903 aa8.64□□□□□ -1.03
USP4-207ENST00000462673 KRI1Q8N9T8 703 aaKnown RBP8.64□□□□□ -1.03
USP4-207ENST00000462673 USP38Q8NB14 1042 aa8.64□□□□□ -1.03
USP4-207ENST00000462673 TCP11Q8WWU5 503 aa8.64□□□□□ -1.03
USP4-207ENST00000462673 CEP170P1Q96L14 293 aa8.64□□□□□ -1.03
USP4-207ENST00000462673 UIMC1Q96RL1 719 aa8.64□□□□□ -1.03
USP4-207ENST00000462673 HSD17B14Q9BPX1 270 aa8.64□□□□□ -1.03
USP4-207ENST00000462673 TRIM5Q9C035 493 aa8.64□□□□□ -1.03
USP4-207ENST00000462673 LRRC27Q9C0I9 530 aa8.64□□□□□ -1.03
USP4-207ENST00000462673 MTIF3Q9H2K0 278 aaKnown RBP8.64□□□□□ -1.03
USP4-207ENST00000462673 HIPK3Q9H422 1215 aa8.64□□□□□ -1.03
USP4-207ENST00000462673 SETD4Q9NVD3 440 aa8.64□□□□□ -1.03
USP4-207ENST00000462673 TUBE1Q9UJT0 475 aa8.64□□□□□ -1.03
USP4-207ENST00000462673 VAV3Q9UKW4 847 aa8.64□□□□□ -1.03
USP4-207ENST00000462673 PCDHA2Q9Y5H9 948 aa8.64□□□□□ -1.03
USP4-207ENST00000462673 SRPRBQ9Y5M8 271 aaKnown RBP8.64□□□□□ -1.03
USP4-207ENST00000462673 GRIN2DO15399 1336 aa8.63□□□□□ -1.03
USP4-207ENST00000462673 SMIM35A0A1B0GVV1 85 aa8.63□□□□□ -1.03
USP4-207ENST00000462673 VWA3AA6NCI4 1184 aa8.63□□□□□ -1.03
USP4-207ENST00000462673 GOLGA6L19H0YKK7 550 aa8.63□□□□□ -1.03
USP4-207ENST00000462673 SPTLC2O15270 562 aa8.63□□□□□ -1.03
USP4-207ENST00000462673 AP5Z1O43299 807 aa8.63□□□□□ -1.03
USP4-207ENST00000462673 DGAT1O75907 488 aa8.63□□□□□ -1.03
USP4-207ENST00000462673 CYP2C9P11712 490 aa8.63□□□□□ -1.03
USP4-207ENST00000462673 ACTN1P12814 892 aa8.63□□□□□ -1.03
USP4-207ENST00000462673 CDK11BP21127 795 aaKnown RBP8.63□□□□□ -1.03
USP4-207ENST00000462673 IGBP1P78318 339 aa8.63□□□□□ -1.03
USP4-207ENST00000462673 PRKCEQ02156 737 aa8.63□□□□□ -1.03
USP4-207ENST00000462673 CEBPZQ03701 1054 aaKnown RBP8.63□□□□□ -1.03
USP4-207ENST00000462673 PPIGQ13427 754 aaKnown RBP eCLIP8.63□□□□□ -1.031e-7■■■■■ 29.8
USP4-207ENST00000462673 STX1AQ16623 288 aa8.63□□□□□ -1.03
USP4-207ENST00000462673 GDF6Q6KF10 455 aaPredicted RBP8.63□□□□□ -1.03
USP4-207ENST00000462673 MFSD5Q6N075 450 aa8.63□□□□□ -1.03
USP4-207ENST00000462673 MTHFD1LQ6UB35 978 aa8.63□□□□□ -1.03
USP4-207ENST00000462673 TRMT1LQ7Z2T5 733 aaKnown RBP8.63□□□□□ -1.03
USP4-207ENST00000462673 RPAINQ86UA6 219 aa8.63□□□□□ -1.03
USP4-207ENST00000462673 SERINC5Q86VE9 423 aa8.63□□□□□ -1.03
USP4-207ENST00000462673 CATSPER3Q86XQ3 398 aa8.63□□□□□ -1.03
USP4-207ENST00000462673 METTL13Q8N6R0 699 aa8.63□□□□□ -1.03
USP4-207ENST00000462673 ZNF579Q8NAF0 562 aaKnown RBP8.63□□□□□ -1.03
USP4-207ENST00000462673 BANK1Q8NDB2 785 aa8.63□□□□□ -1.03
USP4-207ENST00000462673 KIF18AQ8NI77 898 aa8.63□□□□□ -1.03
USP4-207ENST00000462673 SNX29Q8TEQ0 813 aa8.63□□□□□ -1.03
USP4-207ENST00000462673 MRFAP1L1Q96HT8 127 aa8.63□□□□□ -1.03
USP4-207ENST00000462673 DYDC2Q96IM9 177 aa8.63□□□□□ -1.03
USP4-207ENST00000462673 SPATA32Q96LK8 384 aa8.63□□□□□ -1.03
USP4-207ENST00000462673 LXNQ9BS40 222 aa8.63□□□□□ -1.03
USP4-207ENST00000462673 INO80BQ9C086 356 aaPredicted RBP8.63□□□□□ -1.03
USP4-207ENST00000462673 TSPYL1Q9H0U9 437 aa8.63□□□□□ -1.03
USP4-207ENST00000462673 TRPV6Q9H1D0 765 aa8.63□□□□□ -1.03
USP4-207ENST00000462673 TMEM60Q9H2L4 133 aa8.63□□□□□ -1.03
USP4-207ENST00000462673 BMP2KQ9NSY1 1161 aaPredicted RBP8.63□□□□□ -1.03
USP4-207ENST00000462673 TRMT13Q9NUP7 481 aaKnown RBP8.63□□□□□ -1.03
USP4-207ENST00000462673 SEPT9Q9UHD8 586 aaPredicted RBP8.63□□□□□ -1.03
USP4-207ENST00000462673 DBR1Q9UK59 544 aaKnown RBP8.63□□□□□ -1.03
USP4-207ENST00000462673 SQORQ9Y6N5 450 aa8.63□□□□□ -1.03
USP4-207ENST00000462673 KIAA0100Q14667 2235 aaKnown RBP8.63□□□□□ -1.03
USP4-207ENST00000462673 IGSF9BQ9UPX0 1349 aa8.62□□□□□ -1.03
USP4-207ENST00000462673 HTTP42858 3142 aa8.62□□□□□ -1.03
USP4-207ENST00000462673 MBLAC1A4D2B0 266 aaPredicted RBP8.62□□□□□ -1.03
USP4-207ENST00000462673 RSPH10B2B2RC85 870 aa8.62□□□□□ -1.03
USP4-207ENST00000462673 EML1O00423 815 aa8.62□□□□□ -1.03
USP4-207ENST00000462673 TREHO43280 583 aa8.62□□□□□ -1.03
USP4-207ENST00000462673 NRDCO43847 1150 aa8.62□□□□□ -1.03
USP4-207ENST00000462673 EFCAB14O75071 495 aa8.62□□□□□ -1.03
USP4-207ENST00000462673 RSPH10BP0C881 870 aa8.62□□□□□ -1.03
USP4-207ENST00000462673 SELPP16109 830 aa8.62□□□□□ -1.03
USP4-207ENST00000462673 THPOP40225 353 aa8.62□□□□□ -1.03
USP4-207ENST00000462673 POLGP54098 1239 aaPredicted RBP8.62□□□□□ -1.03
USP4-207ENST00000462673 GSDMDP57764 484 aa8.62□□□□□ -1.03
USP4-207ENST00000462673 AMPD3Q01432 767 aa8.62□□□□□ -1.03
USP4-207ENST00000462673 CYP4A11Q02928 519 aa8.62□□□□□ -1.03
USP4-207ENST00000462673 SPIRE1Q08AE8 756 aa8.62□□□□□ -1.03
USP4-207ENST00000462673 CTTNQ14247 550 aaKnown RBP8.62□□□□□ -1.03
USP4-207ENST00000462673 MXD4Q14582 209 aaPredicted RBP8.62□□□□□ -1.03
USP4-207ENST00000462673 XKR9Q5GH70 373 aa8.62□□□□□ -1.03
USP4-207ENST00000462673 EFCAB12Q6NXP0 572 aa8.62□□□□□ -1.03
USP4-207ENST00000462673 CCDC73Q6ZRK6 1079 aa8.62□□□□□ -1.03
USP4-207ENST00000462673 LUZP1Q86V48 1076 aa8.62□□□□□ -1.03
USP4-207ENST00000462673 TRIM50Q86XT4 487 aa8.62□□□□□ -1.03
USP4-207ENST00000462673 MCPH1Q8NEM0 835 aa8.62□□□□□ -1.03
USP4-207ENST00000462673 LMBR1Q8WVP7 490 aa8.62□□□□□ -1.03
USP4-207ENST00000462673 GJA10Q969M2 543 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms