RNA–Protein interactions for RNA: ENST00000462523.5

XPA-202, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 5

Gene XPA, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-202ENST00000462523 KIAA0319LQ8IZA0 1049 aa21.4■■□□□ 1.02
XPA-202ENST00000462523 RASSF8Q8NHQ8 419 aa21.4■■□□□ 1.02
XPA-202ENST00000462523 DNAJB3Q8WWF6 145 aa21.4■■□□□ 1.02
XPA-202ENST00000462523 RAD54LQ92698 747 aa21.4■■□□□ 1.02
XPA-202ENST00000462523 NOC4LQ9BVI4 516 aaKnown RBP21.4■■□□□ 1.02
XPA-202ENST00000462523 TMEM39AQ9NV64 488 aa21.4■■□□□ 1.02
XPA-202ENST00000462523 CCDC39Q9UFE4 941 aa21.4■■□□□ 1.02
XPA-202ENST00000462523 PPME1Q9Y570 386 aa21.4■■□□□ 1.02
XPA-202ENST00000462523 TANC1Q9C0D5 1861 aa21.4■■□□□ 1.02
XPA-202ENST00000462523 SMIM35A0A1B0GVV1 85 aa21.4■■□□□ 1.02
XPA-202ENST00000462523 ARHGEF35A5YM69 484 aa21.4■■□□□ 1.02
XPA-202ENST00000462523 EVI5O60447 810 aa21.4■■□□□ 1.02
XPA-202ENST00000462523 USO1O60763 962 aaKnown RBP21.4■■□□□ 1.02
XPA-202ENST00000462523 GADD45BO75293 160 aaPredicted RBP21.4■■□□□ 1.02
XPA-202ENST00000462523 PLA2G4BP0C869 781 aa21.4■■□□□ 1.02
XPA-202ENST00000462523 POLGP54098 1239 aaPredicted RBP21.4■■□□□ 1.02
XPA-202ENST00000462523 RBL2Q08999 1139 aa21.4■■□□□ 1.02
XPA-202ENST00000462523 EMC2Q15006 297 aa21.4■■□□□ 1.02
XPA-202ENST00000462523 RRAGBQ5VZM2 374 aa21.4■■□□□ 1.02
XPA-202ENST00000462523 TAF2Q6P1X5 1199 aa21.4■■□□□ 1.02
XPA-202ENST00000462523 PADI6Q6TGC4 694 aa21.4■■□□□ 1.02
XPA-202ENST00000462523 METTL13Q8N6R0 699 aa21.4■■□□□ 1.02
XPA-202ENST00000462523 SYT2Q8N9I0 419 aaPredicted RBP21.4■■□□□ 1.02
XPA-202ENST00000462523 DPF3Q92784 378 aa21.4■■□□□ 1.02
XPA-202ENST00000462523 RUSC1Q9BVN2 902 aa21.4■■□□□ 1.02
XPA-202ENST00000462523 FAM49AQ9H0Q0 323 aaPredicted RBP21.4■■□□□ 1.02
XPA-202ENST00000462523 SUGCTQ9HAC7 445 aa21.4■■□□□ 1.02
XPA-202ENST00000462523 KIAA0355O15063 1070 aa21.39■■□□□ 1.01
XPA-202ENST00000462523 RFC5P40937 340 aa21.39■■□□□ 1.01
XPA-202ENST00000462523 NDUFA8P51970 172 aa21.39■■□□□ 1.01
XPA-202ENST00000462523 MCM6Q14566 821 aa21.39■■□□□ 1.01
XPA-202ENST00000462523 TRAF7Q6Q0C0 670 aa21.39■■□□□ 1.01
XPA-202ENST00000462523 RPAINQ86UA6 219 aa21.39■■□□□ 1.01
XPA-202ENST00000462523 SLC7A3Q8WY07 619 aa21.39■■□□□ 1.01
XPA-202ENST00000462523 PRDM5Q9NQX1 630 aaPredicted RBP21.39■■□□□ 1.01
XPA-202ENST00000462523 KCNH3Q9ULD8 1083 aa21.39■■□□□ 1.01
XPA-202ENST00000462523 POLR2DO15514 142 aaKnown RBP21.38■■□□□ 1.01
XPA-202ENST00000462523 DGAT1O75907 488 aa21.38■■□□□ 1.01
XPA-202ENST00000462523 CKBP12277 381 aa21.38■■□□□ 1.01
XPA-202ENST00000462523 STAT6P42226 847 aa21.38■■□□□ 1.01
XPA-202ENST00000462523 RINT1Q6NUQ1 792 aa21.38■■□□□ 1.01
XPA-202ENST00000462523 CCDC73Q6ZRK6 1079 aa21.38■■□□□ 1.01
XPA-202ENST00000462523 FSIP1Q8NA03 581 aa21.38■■□□□ 1.01
XPA-202ENST00000462523 LARP4BQ92615 738 aaKnown RBP21.38■■□□□ 1.01
XPA-202ENST00000462523 CCDC43Q96MW1 224 aaKnown RBP21.38■■□□□ 1.01
XPA-202ENST00000462523 HIPK3Q9H422 1215 aa21.38■■□□□ 1.01
XPA-202ENST00000462523 FAM13BQ9NYF5 915 aa21.38■■□□□ 1.01
XPA-202ENST00000462523 STK17AQ9UEE5 414 aa21.38■■□□□ 1.01
XPA-202ENST00000462523 CYP11B2P19099 503 aa21.37■■□□□ 1.01
XPA-202ENST00000462523 ARSHQ5FYA8 562 aa21.37■■□□□ 1.01
XPA-202ENST00000462523 ZNF618Q5T7W0 954 aa21.37■■□□□ 1.01
XPA-202ENST00000462523 C1orf186Q6ZWK4 172 aa21.37■■□□□ 1.01
XPA-202ENST00000462523 RETREG2Q8NC44 543 aa21.37■■□□□ 1.01
XPA-202ENST00000462523 CAGE1Q8TC20 777 aa21.37■■□□□ 1.01
XPA-202ENST00000462523 MRPS27Q92552 414 aaKnown RBP21.37■■□□□ 1.01
XPA-202ENST00000462523 TMEM143Q96AN5 459 aa21.37■■□□□ 1.01
XPA-202ENST00000462523 DHX58Q96C10 678 aa21.37■■□□□ 1.01
XPA-202ENST00000462523 MTRQ99707 1265 aa21.37■■□□□ 1.01
XPA-202ENST00000462523 PPP1R12CQ9BZL4 782 aa21.37■■□□□ 1.01
XPA-202ENST00000462523 WNT8AQ9H1J5 351 aa21.37■■□□□ 1.01
XPA-202ENST00000462523 ATP6V0A4Q9HBG4 840 aa21.37■■□□□ 1.01
XPA-202ENST00000462523 GPRC5CQ9NQ84 441 aa21.37■■□□□ 1.01
XPA-202ENST00000462523 PITPNM1O00562 1244 aa21.36■■□□□ 1.01
XPA-202ENST00000462523 VTNP04004 478 aa21.36■■□□□ 1.01
XPA-202ENST00000462523 SYN1P17600 705 aa21.36■■□□□ 1.01
XPA-202ENST00000462523 CYP2C18P33260 490 aa21.36■■□□□ 1.01
XPA-202ENST00000462523 THPOP40225 353 aa21.36■■□□□ 1.01
XPA-202ENST00000462523 TMEM62Q0P6H9 643 aa21.36■■□□□ 1.01
XPA-202ENST00000462523 DHX8Q14562 1220 aaKnown RBP21.36■■□□□ 1.01
XPA-202ENST00000462523 OSBPL7Q9BZF2 842 aa21.36■■□□□ 1.01
XPA-202ENST00000462523 POLD4Q9HCU8 107 aa21.36■■□□□ 1.01
XPA-202ENST00000462523 SCN5AQ14524 2016 aa21.36■■□□□ 1.01
XPA-202ENST00000462523 SSBP05455 408 aaKnown RBP eCLIP21.36■■□□□ 1.01
XPA-202ENST00000462523 MGAT3Q09327 533 aa21.36■■□□□ 1.01
XPA-202ENST00000462523 CSPP1Q1MSJ5 1256 aa21.36■■□□□ 1.01
XPA-202ENST00000462523 MAEAQ7L5Y9 396 aa21.36■■□□□ 1.01
XPA-202ENST00000462523 ZMYND8Q9ULU4 1186 aaPredicted RBP21.36■■□□□ 1.01
XPA-202ENST00000462523 NPHP3-ACAD11A0A0J9YXS1 232 aa21.35■■□□□ 1.01
XPA-202ENST00000462523 ACTN4O43707 911 aaKnown RBP21.35■■□□□ 1.01
XPA-202ENST00000462523 TIMP1P01033 207 aa21.35■■□□□ 1.01
XPA-202ENST00000462523 CHRNA1P02708 482 aa21.35■■□□□ 1.01
XPA-202ENST00000462523 CTSHP09668 335 aa21.35■■□□□ 1.01
XPA-202ENST00000462523 BFSP2Q13515 415 aa21.35■■□□□ 1.01
XPA-202ENST00000462523 MBTPS1Q14703 1052 aa21.35■■□□□ 1.01
XPA-202ENST00000462523 GPNMBQ14956 572 aa21.35■■□□□ 1.01
XPA-202ENST00000462523 EXOC8Q8IYI6 725 aa21.35■■□□□ 1.01
XPA-202ENST00000462523 DAW1Q8N136 415 aa21.35■■□□□ 1.01
XPA-202ENST00000462523 IQUBQ8NA54 791 aa21.35■■□□□ 1.01
XPA-202ENST00000462523 PPP1R16BQ96T49 567 aa21.35■■□□□ 1.01
XPA-202ENST00000462523 JPH2Q9BR39 696 aaPredicted RBP21.35■■□□□ 1.01
XPA-202ENST00000462523 SUCLA2Q9P2R7 463 aaPredicted RBP21.35■■□□□ 1.01
XPA-202ENST00000462523 GAS2O43903 313 aaKnown RBP21.34■■□□□ 1.01
XPA-202ENST00000462523 CAND2O75155 1236 aa21.34■■□□□ 1.01
XPA-202ENST00000462523 GPR32O75388 356 aa21.34■■□□□ 1.01
XPA-202ENST00000462523 PRPF40AO75400 957 aaKnown RBP21.34■■□□□ 1.01
XPA-202ENST00000462523 TMOD1P28289 359 aa21.34■■□□□ 1.01
XPA-202ENST00000462523 ARL2P36404 184 aa21.34■■□□□ 1.01
XPA-202ENST00000462523 CCL23P55773 120 aa21.34■■□□□ 1.01
XPA-202ENST00000462523 MAPK7Q13164 816 aa21.34■■□□□ 1.01
XPA-202ENST00000462523 SNW1Q13573 536 aaKnown RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms