RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 MIER2Q8N344 545 aa4.1□□□□□ -1.75
VCL-203ENST00000461383 EAF2Q96CJ1 260 aaPredicted RBP4.1□□□□□ -1.75
VCL-203ENST00000461383 TSPAN17Q96FV3 270 aa4.1□□□□□ -1.75
VCL-203ENST00000461383 RAX2Q96IS3 184 aa4.1□□□□□ -1.75
VCL-203ENST00000461383 MAML3Q96JK9 1138 aa4.1□□□□□ -1.75
VCL-203ENST00000461383 TEKT5Q96M29 485 aa4.1□□□□□ -1.75
VCL-203ENST00000461383 SLC38A3Q99624 504 aa4.1□□□□□ -1.75
VCL-203ENST00000461383 MYL10Q9BUA6 226 aa4.1□□□□□ -1.75
VCL-203ENST00000461383 CSRNP2Q9H175 543 aa4.1□□□□□ -1.75
VCL-203ENST00000461383 TCF7L1Q9HCS4 588 aa4.1□□□□□ -1.75
VCL-203ENST00000461383 NGRNQ9NPE2 291 aaKnown RBP4.1□□□□□ -1.75
VCL-203ENST00000461383 ZBTB21Q9ULJ3 1066 aa4.1□□□□□ -1.75
VCL-203ENST00000461383 GPR45Q9Y5Y3 372 aa4.1□□□□□ -1.75
VCL-203ENST00000461383 VSTM5A8MXK1 200 aa4.09□□□□□ -1.75
VCL-203ENST00000461383 GOLGA6L22H0YM25 854 aa4.09□□□□□ -1.75
VCL-203ENST00000461383 FZD9O00144 591 aa4.09□□□□□ -1.75
VCL-203ENST00000461383 PRPF3O43395 683 aaKnown RBP4.09□□□□□ -1.75
VCL-203ENST00000461383 PCDHGA12O60330 932 aa4.09□□□□□ -1.75
VCL-203ENST00000461383 PEX14O75381 377 aa4.09□□□□□ -1.75
VCL-203ENST00000461383 MYL1P05976 194 aa4.09□□□□□ -1.75
VCL-203ENST00000461383 LPLP06858 475 aa4.09□□□□□ -1.75
VCL-203ENST00000461383 ENO2P09104 434 aaPredicted RBP4.09□□□□□ -1.75
VCL-203ENST00000461383 HSPA6P17066 643 aa4.09□□□□□ -1.75
VCL-203ENST00000461383 AOAHP28039 575 aa4.09□□□□□ -1.75
VCL-203ENST00000461383 MC4RP32245 332 aa4.09□□□□□ -1.75
VCL-203ENST00000461383 STAT5AP42229 794 aa4.09□□□□□ -1.75
VCL-203ENST00000461383 SLC5A3P53794 718 aa4.09□□□□□ -1.75
VCL-203ENST00000461383 HTRA3P83110 453 aa4.09□□□□□ -1.75
VCL-203ENST00000461383 ODF1Q14990 250 aa4.09□□□□□ -1.75
VCL-203ENST00000461383 KCNMB1Q16558 191 aa4.09□□□□□ -1.75
VCL-203ENST00000461383 PLEKHN1Q494U1 663 aaPredicted RBP4.09□□□□□ -1.75
VCL-203ENST00000461383 ARHGAP29Q52LW3 1261 aa4.09□□□□□ -1.75
VCL-203ENST00000461383 IFIT1BQ5T764 474 aaKnown RBP4.09□□□□□ -1.75
VCL-203ENST00000461383 CD276Q5ZPR3 534 aa4.09□□□□□ -1.75
VCL-203ENST00000461383 VASNQ6EMK4 673 aa4.09□□□□□ -1.75
VCL-203ENST00000461383 CD300LDQ6UXZ3 194 aa4.09□□□□□ -1.75
VCL-203ENST00000461383 TMC6Q7Z403 805 aa4.09□□□□□ -1.75
VCL-203ENST00000461383 RTN4RL1Q86UN2 441 aaPredicted RBP4.09□□□□□ -1.75
VCL-203ENST00000461383 CMTR2Q8IYT2 770 aaKnown RBP4.09□□□□□ -1.75
VCL-203ENST00000461383 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.09□□□□□ -1.75
VCL-203ENST00000461383 AUTS2Q8WXX7 1259 aa4.09□□□□□ -1.75
VCL-203ENST00000461383 SSH1Q8WYL5 1049 aa4.09□□□□□ -1.75
VCL-203ENST00000461383 NUP88Q99567 741 aaPredicted RBP4.09□□□□□ -1.75
VCL-203ENST00000461383 FOXB1Q99853 325 aa4.09□□□□□ -1.75
VCL-203ENST00000461383 KRTAP4-2Q9BYR5 136 aa4.09□□□□□ -1.75
VCL-203ENST00000461383 PDGFDQ9GZP0 370 aaPredicted RBP4.09□□□□□ -1.75
VCL-203ENST00000461383 WNT8AQ9H1J5 351 aa4.09□□□□□ -1.75
VCL-203ENST00000461383 SEMA4AQ9H3S1 761 aa4.09□□□□□ -1.75
VCL-203ENST00000461383 SLC39A2Q9NP94 309 aa4.09□□□□□ -1.75
VCL-203ENST00000461383 PRDM11Q9NQV5 511 aa4.09□□□□□ -1.75
VCL-203ENST00000461383 SLC52A1Q9NWF4 448 aa4.09□□□□□ -1.75
VCL-203ENST00000461383 PCDHGA9Q9Y5G4 932 aaKnown RBP4.09□□□□□ -1.75
VCL-203ENST00000461383 PCDHGA8Q9Y5G5 932 aa4.09□□□□□ -1.75
VCL-203ENST00000461383 PCDHGA7Q9Y5G6 932 aa4.09□□□□□ -1.75
VCL-203ENST00000461383 PCDHGA6Q9Y5G7 932 aa4.09□□□□□ -1.75
VCL-203ENST00000461383 PCDHGA3Q9Y5H0 932 aa4.09□□□□□ -1.75
VCL-203ENST00000461383 PCDHGA2Q9Y5H1 932 aa4.09□□□□□ -1.75
VCL-203ENST00000461383 PPP2R3BQ9Y5P8 575 aa4.09□□□□□ -1.75
VCL-203ENST00000461383 HCFC2Q9Y5Z7 792 aa4.09□□□□□ -1.75
VCL-203ENST00000461383 PRSS38A1L453 326 aa4.08□□□□□ -1.76
VCL-203ENST00000461383 OFD1O75665 1012 aa4.08□□□□□ -1.76
VCL-203ENST00000461383 PCDH8O95206 1070 aa4.08□□□□□ -1.76
VCL-203ENST00000461383 PRLP01236 227 aa4.08□□□□□ -1.76
VCL-203ENST00000461383 LRG1P02750 347 aa4.08□□□□□ -1.76
VCL-203ENST00000461383 AGXTP21549 392 aa4.08□□□□□ -1.76
VCL-203ENST00000461383 XPAP23025 273 aaPredicted RBP4.08□□□□□ -1.76
VCL-203ENST00000461383 SLC16A1P53985 500 aa4.08□□□□□ -1.76
VCL-203ENST00000461383 LGALS4P56470 323 aa4.08□□□□□ -1.76
VCL-203ENST00000461383 BCAR1P56945 870 aa4.08□□□□□ -1.76
VCL-203ENST00000461383 MRPS9P82933 396 aaKnown RBP4.08□□□□□ -1.76
VCL-203ENST00000461383 ZNF200P98182 395 aaPredicted RBP4.08□□□□□ -1.76
VCL-203ENST00000461383 ALDH6A1Q02252 535 aaKnown RBP4.08□□□□□ -1.76
VCL-203ENST00000461383 HDAC1Q13547 482 aaPredicted RBP4.08□□□□□ -1.76
VCL-203ENST00000461383 GTF2H3Q13889 308 aa4.08□□□□□ -1.76
VCL-203ENST00000461383 SPIDRQ14159 915 aa4.08□□□□□ -1.76
VCL-203ENST00000461383 ZBTB41Q5SVQ8 909 aa4.08□□□□□ -1.76
VCL-203ENST00000461383 KIAA1841Q6NSI8 718 aa4.08□□□□□ -1.76
VCL-203ENST00000461383 TEPPQ6URK8 271 aa4.08□□□□□ -1.76
VCL-203ENST00000461383 MPZL3Q6UWV2 235 aa4.08□□□□□ -1.76
VCL-203ENST00000461383 TMC5Q6UXY8 1006 aa4.08□□□□□ -1.76
VCL-203ENST00000461383 PPM1NQ8N819 430 aa4.08□□□□□ -1.76
VCL-203ENST00000461383 JADE3Q92613 823 aa4.08□□□□□ -1.76
VCL-203ENST00000461383 FOXRED1Q96CU9 486 aaPredicted RBP4.08□□□□□ -1.76
VCL-203ENST00000461383 ORAI2Q96SN7 254 aa4.08□□□□□ -1.76
VCL-203ENST00000461383 PPP1R16BQ96T49 567 aa4.08□□□□□ -1.76
VCL-203ENST00000461383 CHMP4AQ9BY43 222 aa4.08□□□□□ -1.76
VCL-203ENST00000461383 KCTD10Q9H3F6 313 aa4.08□□□□□ -1.76
VCL-203ENST00000461383 NMRK2Q9NPI5 230 aa4.08□□□□□ -1.76
VCL-203ENST00000461383 INCENPQ9NQS7 918 aa4.08□□□□□ -1.76
VCL-203ENST00000461383 KLHL14Q9P2G3 628 aa4.08□□□□□ -1.76
VCL-203ENST00000461383 DPP7Q9UHL4 492 aa4.08□□□□□ -1.76
VCL-203ENST00000461383 SAP30BPQ9UHR5 308 aaKnown RBP4.08□□□□□ -1.76
VCL-203ENST00000461383 USP18Q9UMW8 372 aa4.08□□□□□ -1.76
VCL-203ENST00000461383 LRRC10BA6NIK2 292 aa4.07□□□□□ -1.76
VCL-203ENST00000461383 KRTAP9-7A8MTY7 169 aa4.07□□□□□ -1.76
VCL-203ENST00000461383 ELL2O00472 640 aaPredicted RBP4.07□□□□□ -1.76
VCL-203ENST00000461383 ERC2O15083 957 aa4.07□□□□□ -1.76
VCL-203ENST00000461383 DTNBO60941 627 aa4.07□□□□□ -1.76
VCL-203ENST00000461383 NDUFS2O75306 463 aa4.07□□□□□ -1.76
VCL-203ENST00000461383 GLI1P08151 1106 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms