RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 LDHDQ86WU2 507 aa5.93□□□□□ -1.46
ATPAF1-203ENST00000460928 IGDCC3Q8IVU1 814 aa5.93□□□□□ -1.46
ATPAF1-203ENST00000460928 C7orf61Q8IZ16 206 aa5.93□□□□□ -1.46
ATPAF1-203ENST00000460928 SYNE4Q8N205 404 aa5.93□□□□□ -1.46
ATPAF1-203ENST00000460928 FAM43AQ8N2R8 423 aa5.93□□□□□ -1.46
ATPAF1-203ENST00000460928 TMEM52Q8NDY8 209 aa5.93□□□□□ -1.46
ATPAF1-203ENST00000460928 CXorf38Q8TB03 319 aa5.93□□□□□ -1.46
ATPAF1-203ENST00000460928 SSH1Q8WYL5 1049 aa5.93□□□□□ -1.46
ATPAF1-203ENST00000460928 NAP1L5Q96NT1 182 aaPredicted RBP5.93□□□□□ -1.46
ATPAF1-203ENST00000460928 FEZ1Q99689 392 aa5.93□□□□□ -1.46
ATPAF1-203ENST00000460928 MYH16Q9H6N6 1097 aa5.93□□□□□ -1.46
ATPAF1-203ENST00000460928 PCDH12Q9NPG4 1184 aa5.93□□□□□ -1.46
ATPAF1-203ENST00000460928 AP5S1Q9NUS5 200 aa5.93□□□□□ -1.46
ATPAF1-203ENST00000460928 PCDHA5Q9Y5H7 936 aa5.93□□□□□ -1.46
ATPAF1-203ENST00000460928 PTCH2Q9Y6C5 1203 aa5.93□□□□□ -1.46
ATPAF1-203ENST00000460928 ZBED9Q6R2W3 1325 aa5.93□□□□□ -1.46
ATPAF1-203ENST00000460928 USP42Q9H9J4 1324 aaKnown RBP5.93□□□□□ -1.46
ATPAF1-203ENST00000460928 MEIS1O00470 390 aa5.92□□□□□ -1.46
ATPAF1-203ENST00000460928 RAB11FIP3O75154 756 aa5.92□□□□□ -1.46
ATPAF1-203ENST00000460928 BCAR3O75815 825 aa5.92□□□□□ -1.46
ATPAF1-203ENST00000460928 MMP10P09238 476 aa5.92□□□□□ -1.46
ATPAF1-203ENST00000460928 SYN1P17600 705 aa5.92□□□□□ -1.46
ATPAF1-203ENST00000460928 IL6STP40189 918 aaPredicted RBP5.92□□□□□ -1.46
ATPAF1-203ENST00000460928 CAP1Q01518 475 aa5.92□□□□□ -1.46
ATPAF1-203ENST00000460928 SLC7A5Q01650 507 aa5.92□□□□□ -1.46
ATPAF1-203ENST00000460928 RAB3GAP1Q15042 981 aa5.92□□□□□ -1.46
ATPAF1-203ENST00000460928 TCEA2Q15560 299 aa5.92□□□□□ -1.46
ATPAF1-203ENST00000460928 TKFCQ3LXA3 575 aa5.92□□□□□ -1.46
ATPAF1-203ENST00000460928 GNPTABQ3T906 1256 aa5.92□□□□□ -1.46
ATPAF1-203ENST00000460928 ANKRD39Q53RE8 183 aa5.92□□□□□ -1.46
ATPAF1-203ENST00000460928 CNKSR3Q6P9H4 555 aa5.92□□□□□ -1.46
ATPAF1-203ENST00000460928 TMC6Q7Z403 805 aa5.92□□□□□ -1.46
ATPAF1-203ENST00000460928 SP8Q8IXZ3 490 aa5.92□□□□□ -1.46
ATPAF1-203ENST00000460928 NUP43Q8NFH3 380 aa5.92□□□□□ -1.46
ATPAF1-203ENST00000460928 JMJD8Q96S16 334 aa5.92□□□□□ -1.46
ATPAF1-203ENST00000460928 SPATA9Q9BWV2 254 aa5.92□□□□□ -1.46
ATPAF1-203ENST00000460928 TEX13AQ9BXU3 409 aaPredicted RBP5.92□□□□□ -1.46
ATPAF1-203ENST00000460928 BABAM1Q9NWV8 329 aa5.92□□□□□ -1.46
ATPAF1-203ENST00000460928 NARFQ9UHQ1 456 aa5.92□□□□□ -1.46
ATPAF1-203ENST00000460928 IRS2Q9Y4H2 1338 aa5.92□□□□□ -1.46
ATPAF1-203ENST00000460928 CARMIL3Q8ND23 1372 aa5.92□□□□□ -1.46
ATPAF1-203ENST00000460928 QSER1Q2KHR3 1735 aa5.91□□□□□ -1.46
ATPAF1-203ENST00000460928 NUP98P52948 1817 aa5.91□□□□□ -1.46
ATPAF1-203ENST00000460928 C9IYK1 514 aa5.91□□□□□ -1.46
ATPAF1-203ENST00000460928 ASMTLO95671 621 aa5.91□□□□□ -1.46
ATPAF1-203ENST00000460928 FAM153BP0C7A2 387 aa5.91□□□□□ -1.46
ATPAF1-203ENST00000460928 POLD1P28340 1107 aa5.91□□□□□ -1.46
ATPAF1-203ENST00000460928 PMS1P54277 932 aaKnown RBP5.91□□□□□ -1.46
ATPAF1-203ENST00000460928 NR1I3Q14994 352 aa5.91□□□□□ -1.46
ATPAF1-203ENST00000460928 RPTNQ6XPR3 784 aa5.91□□□□□ -1.46
ATPAF1-203ENST00000460928 IPO4Q8TEX9 1081 aaKnown RBP5.91□□□□□ -1.46
ATPAF1-203ENST00000460928 KLHL6Q8WZ60 621 aa5.91□□□□□ -1.46
ATPAF1-203ENST00000460928 ABHD8Q96I13 439 aa5.91□□□□□ -1.46
ATPAF1-203ENST00000460928 SLC12A9Q9BXP2 914 aa5.91□□□□□ -1.46
ATPAF1-203ENST00000460928 EPN3Q9H201 632 aa5.91□□□□□ -1.46
ATPAF1-203ENST00000460928 DDX21Q9NR30 783 aaKnown RBP eCLIP5.91□□□□□ -1.46
ATPAF1-203ENST00000460928 IMPACTQ9P2X3 320 aa5.91□□□□□ -1.46
ATPAF1-203ENST00000460928 UBN2Q6ZU65 1347 aa5.91□□□□□ -1.46
ATPAF1-203ENST00000460928 AFDNP55196 1824 aaKnown RBP5.9□□□□□ -1.46
ATPAF1-203ENST00000460928 A0A0U1RQG5 324 aaPredicted RBP5.9□□□□□ -1.46
ATPAF1-203ENST00000460928 NUDT19A8MXV4 375 aa5.9□□□□□ -1.46
ATPAF1-203ENST00000460928 PLIN1O60240 522 aa5.9□□□□□ -1.46
ATPAF1-203ENST00000460928 SUSD5O60279 629 aa5.9□□□□□ -1.46
ATPAF1-203ENST00000460928 TM4SF1P30408 202 aa5.9□□□□□ -1.46
ATPAF1-203ENST00000460928 MASP1P48740 699 aa5.9□□□□□ -1.46
ATPAF1-203ENST00000460928 MAPKAPK2P49137 400 aa5.9□□□□□ -1.46
ATPAF1-203ENST00000460928 LONRF2Q1L5Z9 754 aa5.9□□□□□ -1.46
ATPAF1-203ENST00000460928 CCDC30Q5VVM6 783 aa5.9□□□□□ -1.46
ATPAF1-203ENST00000460928 HLA-DQA1Q5Y7H0 255 aa5.9□□□□□ -1.46
ATPAF1-203ENST00000460928 CYP2R1Q6VVX0 501 aa5.9□□□□□ -1.46
ATPAF1-203ENST00000460928 CCDC144CPQ8IYA2 1237 aa5.9□□□□□ -1.46
ATPAF1-203ENST00000460928 SYNPOQ8N3V7 929 aa5.9□□□□□ -1.46
ATPAF1-203ENST00000460928 LINC01356Q8N9X3 169 aa5.9□□□□□ -1.46
ATPAF1-203ENST00000460928 ZSWIM2Q8NEG5 633 aa5.9□□□□□ -1.46
ATPAF1-203ENST00000460928 MYD88Q99836 296 aa5.9□□□□□ -1.46
ATPAF1-203ENST00000460928 DSCC1Q9BVC3 393 aa5.9□□□□□ -1.46
ATPAF1-203ENST00000460928 CHMP4AQ9BY43 222 aa5.9□□□□□ -1.46
ATPAF1-203ENST00000460928 LUC7LQ9NQ29 371 aaKnown RBP5.9□□□□□ -1.46
ATPAF1-203ENST00000460928 SMC4Q9NTJ3 1288 aa5.9□□□□□ -1.46
ATPAF1-203ENST00000460928 DBF4Q9UBU7 674 aaPredicted RBP5.9□□□□□ -1.46
ATPAF1-203ENST00000460928 ZNF214Q9UL59 606 aaPredicted RBP5.9□□□□□ -1.46
ATPAF1-203ENST00000460928 MAP3K2Q9Y2U5 619 aa5.9□□□□□ -1.46
ATPAF1-203ENST00000460928 SCN7AQ01118 1682 aa5.9□□□□□ -1.47
ATPAF1-203ENST00000460928 MAP3K15Q6ZN16 1313 aa5.9□□□□□ -1.47
ATPAF1-203ENST00000460928 BCORQ6W2J9 1755 aa5.9□□□□□ -1.47
ATPAF1-203ENST00000460928 COL24A1Q17RW2 1714 aa5.89□□□□□ -1.47
ATPAF1-203ENST00000460928 ARFGEF2Q9Y6D5 1785 aa5.89□□□□□ -1.47
ATPAF1-203ENST00000460928 PI4KAP2A4QPH2 592 aa5.89□□□□□ -1.47
ATPAF1-203ENST00000460928 IQCA1LA6NCM1 817 aa5.89□□□□□ -1.47
ATPAF1-203ENST00000460928 OTOL1A6NHN0 477 aaPredicted RBP5.89□□□□□ -1.47
ATPAF1-203ENST00000460928 POLRMTO00411 1230 aaKnown RBP5.89□□□□□ -1.47
ATPAF1-203ENST00000460928 SRGAP3O43295 1099 aa5.89□□□□□ -1.47
ATPAF1-203ENST00000460928 SERPINB2P05120 415 aa5.89□□□□□ -1.47
ATPAF1-203ENST00000460928 HOXB7P09629 217 aa5.89□□□□□ -1.47
ATPAF1-203ENST00000460928 IGFBP6P24592 240 aaPredicted RBP5.89□□□□□ -1.47
ATPAF1-203ENST00000460928 CHRNA5P30532 468 aa5.89□□□□□ -1.47
ATPAF1-203ENST00000460928 RARSP54136 660 aaKnown RBP5.89□□□□□ -1.47
ATPAF1-203ENST00000460928 AMPD3Q01432 767 aa5.89□□□□□ -1.47
ATPAF1-203ENST00000460928 MVKQ03426 396 aa5.89□□□□□ -1.47
ATPAF1-203ENST00000460928 SLC10A6Q3KNW5 377 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms