RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 PDCLQ13371 301 aa15.91■□□□□ 0.14
PTPRU-205ENST00000460170 SLC27A3Q5K4L6 730 aa15.91■□□□□ 0.14
PTPRU-205ENST00000460170 FRMD5Q7Z6J6 570 aa15.91■□□□□ 0.14
PTPRU-205ENST00000460170 SPATA4Q8NEY3 305 aa15.91■□□□□ 0.14
PTPRU-205ENST00000460170 CNOT8Q9UFF9 292 aaKnown RBP15.91■□□□□ 0.14
PTPRU-205ENST00000460170 IPO5O00410 1097 aaKnown RBP15.9■□□□□ 0.14
PTPRU-205ENST00000460170 MED7O43513 233 aa15.9■□□□□ 0.14
PTPRU-205ENST00000460170 ADCY2Q08462 1091 aa15.9■□□□□ 0.14
PTPRU-205ENST00000460170 ZBTB33Q86T24 672 aa15.9■□□□□ 0.14
PTPRU-205ENST00000460170 AGXT2Q9BYV1 514 aa15.9■□□□□ 0.14
PTPRU-205ENST00000460170 AKT3Q9Y243 479 aa15.9■□□□□ 0.14
PTPRU-205ENST00000460170 SART1O43290 800 aaKnown RBP15.9■□□□□ 0.14
PTPRU-205ENST00000460170 CTIFO43310 598 aaKnown RBP15.9■□□□□ 0.14
PTPRU-205ENST00000460170 MAP2K2P36507 400 aa15.9■□□□□ 0.14
PTPRU-205ENST00000460170 C16orf86Q6ZW13 317 aa15.9■□□□□ 0.14
PTPRU-205ENST00000460170 TMEM60Q9H2L4 133 aa15.9■□□□□ 0.14
PTPRU-205ENST00000460170 SLIT1O75093 1534 aa15.9■□□□□ 0.14
PTPRU-205ENST00000460170 ESYT3A0FGR9 886 aa15.9■□□□□ 0.14
PTPRU-205ENST00000460170 TARSL2A2RTX5 802 aaKnown RBP15.9■□□□□ 0.14
PTPRU-205ENST00000460170 QARSP47897 775 aaKnown RBP15.9■□□□□ 0.14
PTPRU-205ENST00000460170 KRT76Q01546 638 aa15.9■□□□□ 0.14
PTPRU-205ENST00000460170 SURF1Q15526 300 aa15.9■□□□□ 0.14
PTPRU-205ENST00000460170 COG1Q8WTW3 980 aa15.9■□□□□ 0.14
PTPRU-205ENST00000460170 IFT122Q9HBG6 1241 aa15.9■□□□□ 0.14
PTPRU-205ENST00000460170 AGPAT5Q9NUQ2 364 aa15.9■□□□□ 0.14
PTPRU-205ENST00000460170 SNX12Q9UMY4 172 aa15.9■□□□□ 0.14
PTPRU-205ENST00000460170 PDXKO00764 312 aa15.9■□□□□ 0.14
PTPRU-205ENST00000460170 MCF2LO15068 1137 aa15.9■□□□□ 0.14
PTPRU-205ENST00000460170 GYPCP04921 128 aa15.9■□□□□ 0.14
PTPRU-205ENST00000460170 TMED2Q15363 201 aa15.9■□□□□ 0.14
PTPRU-205ENST00000460170 ANAPC7Q9UJX3 599 aa15.9■□□□□ 0.14
PTPRU-205ENST00000460170 SCINQ9Y6U3 715 aa15.9■□□□□ 0.14
PTPRU-205ENST00000460170 GIPC1O14908 333 aa15.89■□□□□ 0.13
PTPRU-205ENST00000460170 SLC16A4O15374 487 aa15.89■□□□□ 0.13
PTPRU-205ENST00000460170 LDHAP00338 332 aaKnown RBP15.89■□□□□ 0.13
PTPRU-205ENST00000460170 DYNLT1P63172 113 aa15.89■□□□□ 0.13
PTPRU-205ENST00000460170 SNCBQ16143 134 aa15.89■□□□□ 0.13
PTPRU-205ENST00000460170 LINC00116Q8NCU8 138 aa15.89■□□□□ 0.13
PTPRU-205ENST00000460170 VCX3BQ9H321 246 aa15.89■□□□□ 0.13
PTPRU-205ENST00000460170 TBK1Q9UHD2 729 aa15.89■□□□□ 0.13
PTPRU-205ENST00000460170 CD2APQ9Y5K6 639 aa15.89■□□□□ 0.13
PTPRU-205ENST00000460170 EYA4O95677 639 aa15.89■□□□□ 0.13
PTPRU-205ENST00000460170 VAMP7P51809 220 aa15.89■□□□□ 0.13
PTPRU-205ENST00000460170 DPY19L2Q6NUT2 758 aa15.89■□□□□ 0.13
PTPRU-205ENST00000460170 EEPD1Q7L9B9 569 aa15.89■□□□□ 0.13
PTPRU-205ENST00000460170 SESTD1Q86VW0 696 aa15.89■□□□□ 0.13
PTPRU-205ENST00000460170 RPUSD2Q8IZ73 545 aaKnown RBP15.89■□□□□ 0.13
PTPRU-205ENST00000460170 NME8Q8N427 588 aa15.89■□□□□ 0.13
PTPRU-205ENST00000460170 CDKL2Q92772 493 aa15.89■□□□□ 0.13
PTPRU-205ENST00000460170 CALR3Q96L12 384 aaKnown RBP15.89■□□□□ 0.13
PTPRU-205ENST00000460170 CRAMP1Q96RY5 1269 aa15.89■□□□□ 0.13
PTPRU-205ENST00000460170 RAVER2Q9HCJ3 691 aaKnown RBP15.89■□□□□ 0.13
PTPRU-205ENST00000460170 HPSEQ9Y251 543 aa15.89■□□□□ 0.13
PTPRU-205ENST00000460170 MYMKA6NI61 221 aa15.89■□□□□ 0.13
PTPRU-205ENST00000460170 GMNNO75496 209 aa15.89■□□□□ 0.13
PTPRU-205ENST00000460170 PRR5LQ6MZQ0 368 aa15.89■□□□□ 0.13
PTPRU-205ENST00000460170 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.89■□□□□ 0.131e-8■□□□□ 9.2
PTPRU-205ENST00000460170 LXNQ9BS40 222 aa15.89■□□□□ 0.13
PTPRU-205ENST00000460170 CALN1Q9BXU9 219 aa15.89■□□□□ 0.13
PTPRU-205ENST00000460170 INTS2Q9H0H0 1204 aaKnown RBP15.89■□□□□ 0.13
PTPRU-205ENST00000460170 DDX47Q9H0S4 455 aaKnown RBP15.89■□□□□ 0.13
PTPRU-205ENST00000460170 KIAA1586Q9HCI6 787 aa15.89■□□□□ 0.13
PTPRU-205ENST00000460170 SPATA31A1Q5TZJ5 1347 aa15.89■□□□□ 0.13
PTPRU-205ENST00000460170 MROH1Q8NDA8 1641 aa15.89■□□□□ 0.13
PTPRU-205ENST00000460170 UBE2Q2LH0YL09 131 aa15.88■□□□□ 0.13
PTPRU-205ENST00000460170 RXRBP28702 533 aa15.88■□□□□ 0.13
PTPRU-205ENST00000460170 CCNA1P78396 465 aa15.88■□□□□ 0.13
PTPRU-205ENST00000460170 ADAM22Q9P0K1 906 aa15.88■□□□□ 0.13
PTPRU-205ENST00000460170 SEPT10Q9P0V9 454 aa15.88■□□□□ 0.13
PTPRU-205ENST00000460170 HERC5Q9UII4 1024 aaKnown RBP15.88■□□□□ 0.13
PTPRU-205ENST00000460170 PACSIN2Q9UNF0 486 aaPredicted RBP15.88■□□□□ 0.13
PTPRU-205ENST00000460170 PPP1R3GB7ZBB8 358 aa15.88■□□□□ 0.13
PTPRU-205ENST00000460170 XPOTO43592 962 aaKnown RBP15.88■□□□□ 0.13
PTPRU-205ENST00000460170 EXOC1LA0A1B0GW35 172 aa15.88■□□□□ 0.13
PTPRU-205ENST00000460170 SSU72P8A0A1W2PR75 194 aa15.88■□□□□ 0.13
PTPRU-205ENST00000460170 OSTNP61366 133 aa15.88■□□□□ 0.13
PTPRU-205ENST00000460170 GLYCTKQ8IVS8 523 aa15.88■□□□□ 0.13
PTPRU-205ENST00000460170 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.88■□□□□ 0.138e-7■■□□□ 11.9
PTPRU-205ENST00000460170 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.88■□□□□ 0.13
PTPRU-205ENST00000460170 MEGF6O75095 1541 aa15.88■□□□□ 0.13
PTPRU-205ENST00000460170 ACSL3O95573 720 aa15.88■□□□□ 0.13
PTPRU-205ENST00000460170 PDHBP11177 359 aa15.88■□□□□ 0.13
PTPRU-205ENST00000460170 MSH2P43246 934 aa15.88■□□□□ 0.13
PTPRU-205ENST00000460170 PRPF38AQ8NAV1 312 aaKnown RBP15.88■□□□□ 0.13
PTPRU-205ENST00000460170 ATP6V0A4Q9HBG4 840 aa15.88■□□□□ 0.13
PTPRU-205ENST00000460170 AFF2P51816 1311 aa15.88■□□□□ 0.13
PTPRU-205ENST00000460170 TRIM49P0CI25 452 aa15.87■□□□□ 0.13
PTPRU-205ENST00000460170 TRIM49CP0CI26 452 aa15.87■□□□□ 0.13
PTPRU-205ENST00000460170 SRGAP2CP0DJJ0 459 aa15.87■□□□□ 0.13
PTPRU-205ENST00000460170 CLEC10AQ8IUN9 316 aa15.87■□□□□ 0.13
PTPRU-205ENST00000460170 RNF169Q8NCN4 708 aa15.87■□□□□ 0.13
PTPRU-205ENST00000460170 SPC25Q9HBM1 224 aa15.87■□□□□ 0.13
PTPRU-205ENST00000460170 RFX1P22670 979 aa15.87■□□□□ 0.13
PTPRU-205ENST00000460170 BASP1P80723 227 aaKnown RBP15.87■□□□□ 0.13
PTPRU-205ENST00000460170 ST3GAL1Q11201 340 aa15.87■□□□□ 0.13
PTPRU-205ENST00000460170 EPHA7Q15375 998 aa15.87■□□□□ 0.13
PTPRU-205ENST00000460170 CEP55Q53EZ4 464 aa15.87■□□□□ 0.13
PTPRU-205ENST00000460170 FAM149B1Q96BN6 582 aa15.87■□□□□ 0.13
PTPRU-205ENST00000460170 VCXQ9H320 206 aa15.87■□□□□ 0.13
PTPRU-205ENST00000460170 DENND3A2RUS2 1198 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms