RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 ADAM9Q13443 819 aa8.31□□□□□ -1.08
HDAC9-218ENST00000456174 IL17AQ16552 155 aa8.31□□□□□ -1.08
HDAC9-218ENST00000456174 IFI16Q16666 785 aaKnown RBP8.31□□□□□ -1.08
HDAC9-218ENST00000456174 ARL6IP4Q66PJ3 421 aaKnown RBP8.31□□□□□ -1.08
HDAC9-218ENST00000456174 PPP1R18Q6NYC8 613 aa8.31□□□□□ -1.08
HDAC9-218ENST00000456174 MIGA2Q7L4E1 593 aa8.31□□□□□ -1.08
HDAC9-218ENST00000456174 MAATS1Q7Z4T9 603 aa8.31□□□□□ -1.08
HDAC9-218ENST00000456174 CDAN1Q8IWY9 1227 aa8.31□□□□□ -1.08
HDAC9-218ENST00000456174 CACNA2D3Q8IZS8 1091 aa8.31□□□□□ -1.08
HDAC9-218ENST00000456174 MMGT1Q8N4V1 131 aa8.31□□□□□ -1.08
HDAC9-218ENST00000456174 SH2D3CQ8N5H7 860 aa8.31□□□□□ -1.08
HDAC9-218ENST00000456174 CCDC63Q8NA47 563 aa8.31□□□□□ -1.08
HDAC9-218ENST00000456174 TSEN2Q8NCE0 465 aaKnown RBP8.31□□□□□ -1.08
HDAC9-218ENST00000456174 MTMR8Q96EF0 704 aa8.31□□□□□ -1.08
HDAC9-218ENST00000456174 CCDC51Q96ER9 411 aa8.31□□□□□ -1.08
HDAC9-218ENST00000456174 IFT43Q96FT9 208 aa8.31□□□□□ -1.08
HDAC9-218ENST00000456174 TRPV5Q9NQA5 729 aa8.31□□□□□ -1.08
HDAC9-218ENST00000456174 UTP6Q9NYH9 597 aaKnown RBP8.31□□□□□ -1.08
HDAC9-218ENST00000456174 SLC12A4Q9UP95 1085 aa8.31□□□□□ -1.08
HDAC9-218ENST00000456174 DICER1Q9UPY3 1922 aaKnown RBP8.3□□□□□ -1.08
HDAC9-218ENST00000456174 SPDYE5A6NIY4 337 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 HMGB1P1B2RPK0 211 aaPredicted RBP8.3□□□□□ -1.08
HDAC9-218ENST00000456174 FOXN1O15353 648 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 MAP3K13O43283 966 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 ACTN4O43707 911 aaKnown RBP8.3□□□□□ -1.08
HDAC9-218ENST00000456174 NDUFB10O96000 172 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 PAEPP09466 180 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 YY1P25490 414 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 TNNI2P48788 182 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 GMPSP49915 693 aaPredicted RBP8.3□□□□□ -1.08
HDAC9-218ENST00000456174 ITIH3Q06033 890 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 PPP1R7Q15435 360 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 ANKRD20A2Q5SQ80 823 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 ANKRD20A1Q5TYW2 823 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 ANKRD20A3Q5VUR7 823 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 ANO7Q6IWH7 933 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 KANK3Q6NY19 840 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 EXOC8Q8IYI6 725 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 ARFGAP2Q8N6H7 521 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 CCDC155Q8N6L0 562 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 OPTNQ96CV9 577 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 NAF1Q96HR8 494 aaKnown RBP8.3□□□□□ -1.08
HDAC9-218ENST00000456174 GMCL1Q96IK5 515 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 NUP88Q99567 741 aaPredicted RBP8.3□□□□□ -1.08
HDAC9-218ENST00000456174 ARHGEF10LQ9HCE6 1279 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.3□□□□□ -1.08
HDAC9-218ENST00000456174 TMEM260Q9NX78 707 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 GJA3Q9Y6H8 435 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 MYH7BA7E2Y1 1941 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 A0A087X0B3 334 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 A0A1W2PRG0 241 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 F8VZ95 297 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 FZD9O00144 591 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 TRAPPC3O43617 180 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 ZNF189O75820 626 aaPredicted RBP8.3□□□□□ -1.08
HDAC9-218ENST00000456174 EGFRP00533 1210 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 LONP1P36776 959 aaKnown RBP8.3□□□□□ -1.08
HDAC9-218ENST00000456174 TMEM62Q0P6H9 643 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 ITGB3BPQ13352 177 aaPredicted RBP8.3□□□□□ -1.08
HDAC9-218ENST00000456174 POSTNQ15063 836 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 LETM2Q2VYF4 491 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 IQCEQ6IPM2 695 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 CCDC70Q6NSX1 233 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 CCDC80Q76M96 950 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 ZNF572Q7Z3I7 529 aaPredicted RBP8.3□□□□□ -1.08
HDAC9-218ENST00000456174 NEK8Q86SG6 692 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 MICALL2Q8IY33 904 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 IQCKQ8N0W5 287 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 TBCKQ8TEA7 893 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 JAKMIP2Q96AA8 810 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 ZIM3Q96PE6 472 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 IWS1Q96ST2 819 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 DMAP1Q9NPF5 467 aaPredicted RBP8.3□□□□□ -1.08
HDAC9-218ENST00000456174 RIC8AQ9NPQ8 531 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 TMOD4Q9NZQ9 345 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 PGAP2Q9UHJ9 254 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 ZBTB21Q9ULJ3 1066 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 PCDHA5Q9Y5H7 936 aa8.3□□□□□ -1.08
HDAC9-218ENST00000456174 LAD1O00515 517 aa8.29□□□□□ -1.08
HDAC9-218ENST00000456174 CCNT1O60563 726 aaKnown RBP8.29□□□□□ -1.08
HDAC9-218ENST00000456174 ZMYND10O75800 440 aa8.29□□□□□ -1.08
HDAC9-218ENST00000456174 BMP3P12645 472 aa8.29□□□□□ -1.08
HDAC9-218ENST00000456174 CYP11B2P19099 503 aa8.29□□□□□ -1.08
HDAC9-218ENST00000456174 LMNB2Q03252 620 aa8.29□□□□□ -1.08
HDAC9-218ENST00000456174 IKQ13123 557 aaPredicted RBP8.29□□□□□ -1.08
HDAC9-218ENST00000456174 NR1I3Q14994 352 aa8.29□□□□□ -1.08
HDAC9-218ENST00000456174 PTPN21Q16825 1174 aa8.29□□□□□ -1.08
HDAC9-218ENST00000456174 QRICH1Q2TAL8 776 aa8.29□□□□□ -1.08
HDAC9-218ENST00000456174 KBTBD12Q3ZCT8 623 aa8.29□□□□□ -1.08
HDAC9-218ENST00000456174 DTHD1Q6ZMT9 781 aa8.29□□□□□ -1.08
HDAC9-218ENST00000456174 SAMD7Q7Z3H4 446 aa8.29□□□□□ -1.08
HDAC9-218ENST00000456174 RNF168Q8IYW5 571 aaPredicted RBP8.29□□□□□ -1.08
HDAC9-218ENST00000456174 MLKLQ8NB16 471 aa8.29□□□□□ -1.08
HDAC9-218ENST00000456174 KIFAP3Q92845 792 aa8.29□□□□□ -1.08
HDAC9-218ENST00000456174 ATP6V1G3Q96LB4 118 aa8.29□□□□□ -1.08
HDAC9-218ENST00000456174 FAM167BQ9BTA0 163 aa8.29□□□□□ -1.08
HDAC9-218ENST00000456174 TMEM60Q9H2L4 133 aa8.29□□□□□ -1.08
HDAC9-218ENST00000456174 GPBP1L1Q9HC44 474 aaPredicted RBP8.29□□□□□ -1.08
HDAC9-218ENST00000456174 PANK4Q9NVE7 773 aa8.29□□□□□ -1.08
HDAC9-218ENST00000456174 GALNT8Q9NY28 637 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms