RNA–Protein interactions for RNA: ENST00000455551.6

SEMA4D-213, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 3,594 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-213ENST00000455551 TMEM39BQ9GZU3 492 aa13.36□□□□□ -0.27
SEMA4D-213ENST00000455551 ATAD5Q96QE3 1844 aa13.36□□□□□ -0.27
SEMA4D-213ENST00000455551 FLOT1O75955 427 aa13.35□□□□□ -0.27
SEMA4D-213ENST00000455551 RUFY1Q96T51 708 aa13.35□□□□□ -0.27
SEMA4D-213ENST00000455551 TUFT1Q9NNX1 390 aa13.35□□□□□ -0.27
SEMA4D-213ENST00000455551 CWC15Q9P013 229 aaKnown RBP13.35□□□□□ -0.27
SEMA4D-213ENST00000455551 LCMT1Q9UIC8 334 aa13.35□□□□□ -0.27
SEMA4D-213ENST00000455551 HERC5Q9UII4 1024 aaKnown RBP13.35□□□□□ -0.27
SEMA4D-213ENST00000455551 SHTN1A0MZ66 631 aa13.35□□□□□ -0.27
SEMA4D-213ENST00000455551 PSMC2P35998 433 aaKnown RBP13.35□□□□□ -0.27
SEMA4D-213ENST00000455551 IFT20Q8IY31 132 aa13.35□□□□□ -0.27
SEMA4D-213ENST00000455551 C7orf43Q8WVR3 580 aa13.35□□□□□ -0.27
SEMA4D-213ENST00000455551 SLC5A5Q92911 643 aa13.35□□□□□ -0.27
SEMA4D-213ENST00000455551 SH2D3AQ9BRG2 576 aa13.35□□□□□ -0.27
SEMA4D-213ENST00000455551 AP1M1Q9BXS5 423 aa13.35□□□□□ -0.27
SEMA4D-213ENST00000455551 ZNF70Q9UC06 446 aaPredicted RBP13.35□□□□□ -0.27
SEMA4D-213ENST00000455551 DDX3XO00571 662 aaKnown RBP eCLIP13.35□□□□□ -0.27
SEMA4D-213ENST00000455551 RAD51CO43502 376 aa13.35□□□□□ -0.27
SEMA4D-213ENST00000455551 KIF4AO95239 1232 aa13.35□□□□□ -0.27
SEMA4D-213ENST00000455551 DLGAP5Q15398 846 aa13.35□□□□□ -0.27
SEMA4D-213ENST00000455551 CBWD6Q4V339 395 aa13.35□□□□□ -0.27
SEMA4D-213ENST00000455551 CBWD3Q5JTY5 395 aa13.35□□□□□ -0.27
SEMA4D-213ENST00000455551 CBWD5Q5RIA9 395 aa13.35□□□□□ -0.27
SEMA4D-213ENST00000455551 TTC19Q6DKK2 380 aaPredicted RBP13.35□□□□□ -0.27
SEMA4D-213ENST00000455551 EMBQ6PCB8 327 aa13.35□□□□□ -0.27
SEMA4D-213ENST00000455551 CASKIN2Q8WXE0 1202 aa13.35□□□□□ -0.27
SEMA4D-213ENST00000455551 ARL8AQ96BM9 186 aa13.35□□□□□ -0.27
SEMA4D-213ENST00000455551 LXNQ9BS40 222 aa13.35□□□□□ -0.27
SEMA4D-213ENST00000455551 RNF14Q9UBS8 474 aa13.35□□□□□ -0.27
SEMA4D-213ENST00000455551 BZW2Q9Y6E2 419 aaKnown RBP13.35□□□□□ -0.27
SEMA4D-213ENST00000455551 JAM2P57087 298 aa13.34□□□□□ -0.27
SEMA4D-213ENST00000455551 PPP2R5CQ13362 524 aa13.34□□□□□ -0.27
SEMA4D-213ENST00000455551 TBC1D10BQ4KMP7 808 aaPredicted RBP13.34□□□□□ -0.27
SEMA4D-213ENST00000455551 USP38Q8NB14 1042 aa13.34□□□□□ -0.27
SEMA4D-213ENST00000455551 CCDC43Q96MW1 224 aaKnown RBP13.34□□□□□ -0.27
SEMA4D-213ENST00000455551 SEPT11Q9NVA2 429 aaKnown RBP13.34□□□□□ -0.27
SEMA4D-213ENST00000455551 RSPH14Q9UHP6 348 aa13.34□□□□□ -0.27
SEMA4D-213ENST00000455551 ZNF646O15015 1829 aaPredicted RBP13.34□□□□□ -0.27
SEMA4D-213ENST00000455551 PPP1R12BO60237 982 aaPredicted RBP13.34□□□□□ -0.27
SEMA4D-213ENST00000455551 EVI5O60447 810 aa13.34□□□□□ -0.27
SEMA4D-213ENST00000455551 HSF2BPO75031 334 aa13.34□□□□□ -0.27
SEMA4D-213ENST00000455551 HS2ST1Q7LGA3 356 aa13.34□□□□□ -0.27
SEMA4D-213ENST00000455551 VPS36Q86VN1 386 aa13.34□□□□□ -0.27
SEMA4D-213ENST00000455551 LDHDQ86WU2 507 aa13.34□□□□□ -0.27
SEMA4D-213ENST00000455551 GLYCTKQ8IVS8 523 aa13.34□□□□□ -0.27
SEMA4D-213ENST00000455551 BORCS6Q96GS4 357 aa13.34□□□□□ -0.27
SEMA4D-213ENST00000455551 H2AFZP0C0S5 128 aa13.33□□□□□ -0.27
SEMA4D-213ENST00000455551 ABCB4P21439 1286 aa13.33□□□□□ -0.27
SEMA4D-213ENST00000455551 FMO5P49326 533 aa13.33□□□□□ -0.27
SEMA4D-213ENST00000455551 ARHGAP44Q17R89 818 aa13.33□□□□□ -0.27
SEMA4D-213ENST00000455551 GLE1Q53GS7 698 aaKnown RBP13.33□□□□□ -0.27
SEMA4D-213ENST00000455551 KCTD16Q68DU8 428 aa13.33□□□□□ -0.27
SEMA4D-213ENST00000455551 H2AFVQ71UI9 128 aa13.33□□□□□ -0.27
SEMA4D-213ENST00000455551 SYCP3Q8IZU3 236 aa13.33□□□□□ -0.27
SEMA4D-213ENST00000455551 CHURC1Q8WUH1 139 aa13.33□□□□□ -0.27
SEMA4D-213ENST00000455551 AGBL1Q96MI9 1066 aa13.33□□□□□ -0.27
SEMA4D-213ENST00000455551 ZIM3Q96PE6 472 aa13.33□□□□□ -0.27
SEMA4D-213ENST00000455551 FIZ1Q96SL8 496 aa13.33□□□□□ -0.27
SEMA4D-213ENST00000455551 RANBP17Q9H2T7 1088 aaKnown RBP13.33□□□□□ -0.27
SEMA4D-213ENST00000455551 MRPL11Q9Y3B7 192 aaKnown RBP13.33□□□□□ -0.27
SEMA4D-213ENST00000455551 FRMPD4Q14CM0 1322 aa13.33□□□□□ -0.28
SEMA4D-213ENST00000455551 ARHGEF35A5YM69 484 aa13.33□□□□□ -0.28
SEMA4D-213ENST00000455551 TISP43B9A030 160 aa13.33□□□□□ -0.28
SEMA4D-213ENST00000455551 EIF3DO15371 548 aaKnown RBP eCLIP13.33□□□□□ -0.28
SEMA4D-213ENST00000455551 PRKCIP41743 596 aa13.33□□□□□ -0.28
SEMA4D-213ENST00000455551 DRAP1Q14919 205 aaPredicted RBP13.33□□□□□ -0.28
SEMA4D-213ENST00000455551 ZNF720Q7Z2F6 126 aa13.33□□□□□ -0.28
SEMA4D-213ENST00000455551 LRRC57Q8N9N7 239 aa13.33□□□□□ -0.28
SEMA4D-213ENST00000455551 TPCN2Q8NHX9 752 aa13.33□□□□□ -0.28
SEMA4D-213ENST00000455551 LNX1Q8TBB1 728 aaPredicted RBP13.33□□□□□ -0.28
SEMA4D-213ENST00000455551 RUBCNQ92622 972 aa13.33□□□□□ -0.28
SEMA4D-213ENST00000455551 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.33□□□□□ -0.28
SEMA4D-213ENST00000455551 GDF3Q9NR23 364 aa13.33□□□□□ -0.28
SEMA4D-213ENST00000455551 ZNF277Q9NRM2 450 aaPredicted RBP13.33□□□□□ -0.28
SEMA4D-213ENST00000455551 AGPAT3Q9NRZ7 376 aa13.33□□□□□ -0.28
SEMA4D-213ENST00000455551 DNAJC12Q9UKB3 198 aa13.33□□□□□ -0.28
SEMA4D-213ENST00000455551 ANKRD65E5RJM6 399 aa13.33□□□□□ -0.28
SEMA4D-213ENST00000455551 IPO5O00410 1097 aaKnown RBP13.33□□□□□ -0.28
SEMA4D-213ENST00000455551 HIP1RO75146 1068 aa13.33□□□□□ -0.28
SEMA4D-213ENST00000455551 LRRN2O75325 713 aa13.33□□□□□ -0.28
SEMA4D-213ENST00000455551 KRT14P02533 472 aa13.33□□□□□ -0.28
SEMA4D-213ENST00000455551 STAT1P42224 750 aa13.33□□□□□ -0.28
SEMA4D-213ENST00000455551 PAK2Q13177 524 aa13.33□□□□□ -0.28
SEMA4D-213ENST00000455551 GRIPAP1Q4V328 841 aa13.33□□□□□ -0.28
SEMA4D-213ENST00000455551 C10orf76Q5T2E6 689 aa13.33□□□□□ -0.28
SEMA4D-213ENST00000455551 PEX26Q7Z412 305 aa13.33□□□□□ -0.28
SEMA4D-213ENST00000455551 DAAM2Q86T65 1068 aa13.33□□□□□ -0.28
SEMA4D-213ENST00000455551 SH2D3CQ8N5H7 860 aa13.33□□□□□ -0.28
SEMA4D-213ENST00000455551 NACC1Q96RE7 527 aa13.33□□□□□ -0.28
SEMA4D-213ENST00000455551 TEKT3Q9BXF9 490 aa13.33□□□□□ -0.28
SEMA4D-213ENST00000455551 PCIF1Q9H4Z3 704 aa13.33□□□□□ -0.28
SEMA4D-213ENST00000455551 VCPKMTQ9H867 229 aa13.33□□□□□ -0.28
SEMA4D-213ENST00000455551 HOMER2Q9NSB8 354 aa13.33□□□□□ -0.28
SEMA4D-213ENST00000455551 FRMD4BQ9Y2L6 1034 aa13.33□□□□□ -0.28
SEMA4D-213ENST00000455551 EXOC3O60645 756 aa13.32□□□□□ -0.28
SEMA4D-213ENST00000455551 VIL1P09327 827 aaKnown RBP13.32□□□□□ -0.28
SEMA4D-213ENST00000455551 TNNC1P63316 161 aa13.32□□□□□ -0.28
SEMA4D-213ENST00000455551 HLTFQ14527 1009 aaKnown RBP eCLIP13.32□□□□□ -0.28
SEMA4D-213ENST00000455551 TTMPQ5BVD1 217 aa13.32□□□□□ -0.28
SEMA4D-213ENST00000455551 RSBN1LQ6PCB5 846 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms