RNA–Protein interactions for RNA: ENST00000454850.1

CLCN4-204, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 3

Gene CLCN4, Length 487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-204ENST00000454850 CCDC82Q8N4S0 544 aa11.3□□□□□ -0.6
CLCN4-204ENST00000454850 TDRD5Q8NAT2 981 aaKnown RBP11.3□□□□□ -0.6
CLCN4-204ENST00000454850 RNF169Q8NCN4 708 aa11.3□□□□□ -0.6
CLCN4-204ENST00000454850 FLCNQ8NFG4 579 aa11.3□□□□□ -0.6
CLCN4-204ENST00000454850 CYP2W1Q8TAV3 490 aa11.3□□□□□ -0.6
CLCN4-204ENST00000454850 RASGRP4Q8TDF6 673 aa11.3□□□□□ -0.6
CLCN4-204ENST00000454850 IGDCC4Q8TDY8 1250 aa11.3□□□□□ -0.6
CLCN4-204ENST00000454850 NKD2Q969F2 451 aaPredicted RBP11.3□□□□□ -0.6
CLCN4-204ENST00000454850 PGBD1Q96JS3 809 aa11.3□□□□□ -0.6
CLCN4-204ENST00000454850 ZNF558Q96NG5 402 aa11.3□□□□□ -0.6
CLCN4-204ENST00000454850 LY9Q9HBG7 655 aa11.3□□□□□ -0.6
CLCN4-204ENST00000454850 NGRNQ9NPE2 291 aaKnown RBP11.3□□□□□ -0.6
CLCN4-204ENST00000454850 TMEM161AQ9NX61 479 aa11.3□□□□□ -0.6
CLCN4-204ENST00000454850 HCFC2Q9Y5Z7 792 aa11.3□□□□□ -0.6
CLCN4-204ENST00000454850 TPRP12270 2363 aaKnown RBP11.3□□□□□ -0.6
CLCN4-204ENST00000454850 MAFGO15525 162 aa11.29□□□□□ -0.6
CLCN4-204ENST00000454850 VTNP04004 478 aa11.29□□□□□ -0.6
CLCN4-204ENST00000454850 ARP10275 920 aa11.29□□□□□ -0.6
CLCN4-204ENST00000454850 PPM1AP35813 382 aa11.29□□□□□ -0.6
CLCN4-204ENST00000454850 PLCB3Q01970 1234 aa11.29□□□□□ -0.6
CLCN4-204ENST00000454850 KRT17Q04695 432 aa11.29□□□□□ -0.6
CLCN4-204ENST00000454850 ITGB3BPQ13352 177 aaPredicted RBP11.29□□□□□ -0.6
CLCN4-204ENST00000454850 SMC1AQ14683 1233 aaKnown RBP11.29□□□□□ -0.6
CLCN4-204ENST00000454850 ODR4Q5SWX8 454 aa11.29□□□□□ -0.6
CLCN4-204ENST00000454850 MCTP2Q6DN12 878 aa11.29□□□□□ -0.6
CLCN4-204ENST00000454850 KANK3Q6NY19 840 aa11.29□□□□□ -0.6
CLCN4-204ENST00000454850 TRMT1LQ7Z2T5 733 aaKnown RBP11.29□□□□□ -0.6
CLCN4-204ENST00000454850 HEATR3Q7Z4Q2 680 aa11.29□□□□□ -0.6
CLCN4-204ENST00000454850 KIAA0319LQ8IZA0 1049 aa11.29□□□□□ -0.6
CLCN4-204ENST00000454850 ABI1Q8IZP0 508 aa11.29□□□□□ -0.6
CLCN4-204ENST00000454850 C12orf76Q8N812 135 aaPredicted RBP11.29□□□□□ -0.6
CLCN4-204ENST00000454850 NECTIN4Q96NY8 510 aa11.29□□□□□ -0.6
CLCN4-204ENST00000454850 MXRA8Q9BRK3 442 aa11.29□□□□□ -0.6
CLCN4-204ENST00000454850 TMEM117Q9H0C3 514 aa11.29□□□□□ -0.6
CLCN4-204ENST00000454850 ADAM7Q9H2U9 754 aa11.29□□□□□ -0.6
CLCN4-204ENST00000454850 RWDD1Q9H446 243 aaPredicted RBP11.29□□□□□ -0.6
CLCN4-204ENST00000454850 LIMD1Q9UGP4 676 aa11.29□□□□□ -0.6
CLCN4-204ENST00000454850 EPG5Q9HCE0 2579 aa11.29□□□□□ -0.6
CLCN4-204ENST00000454850 NFASCO94856 1347 aa11.29□□□□□ -0.6
CLCN4-204ENST00000454850 C2orf71A6NGG8 1288 aa11.28□□□□□ -0.6
CLCN4-204ENST00000454850 HBP1O60381 514 aa11.28□□□□□ -0.6
CLCN4-204ENST00000454850 CLASP2O75122 1294 aaKnown RBP11.28□□□□□ -0.6
CLCN4-204ENST00000454850 IGHDP01880 384 aa11.28□□□□□ -0.6
CLCN4-204ENST00000454850 MTHFRP42898 656 aa11.28□□□□□ -0.6
CLCN4-204ENST00000454850 GNAQP50148 359 aa11.28□□□□□ -0.6
CLCN4-204ENST00000454850 ITIH3Q06033 890 aa11.28□□□□□ -0.6
CLCN4-204ENST00000454850 FAM160B1Q5W0V3 765 aa11.28□□□□□ -0.6
CLCN4-204ENST00000454850 PDXDC2PQ6P474 469 aa11.28□□□□□ -0.6
CLCN4-204ENST00000454850 CASC1Q6TDU7 716 aa11.28□□□□□ -0.6
CLCN4-204ENST00000454850 ERMP1Q7Z2K6 904 aa11.28□□□□□ -0.6
CLCN4-204ENST00000454850 CCDC60Q8IWA6 550 aaPredicted RBP11.28□□□□□ -0.6
CLCN4-204ENST00000454850 CKAP2LQ8IYA6 745 aa11.28□□□□□ -0.6
CLCN4-204ENST00000454850 MB21D2Q8IYB1 491 aaPredicted RBP11.28□□□□□ -0.6
CLCN4-204ENST00000454850 LRRC43Q8N309 656 aa11.28□□□□□ -0.6
CLCN4-204ENST00000454850 METTL13Q8N6R0 699 aa11.28□□□□□ -0.6
CLCN4-204ENST00000454850 CASD1Q96PB1 797 aa11.28□□□□□ -0.6
CLCN4-204ENST00000454850 MAP3K14Q99558 947 aa11.28□□□□□ -0.6
CLCN4-204ENST00000454850 LZTS2Q9BRK4 669 aa11.28□□□□□ -0.6
CLCN4-204ENST00000454850 RNF19AQ9NV58 838 aa11.28□□□□□ -0.6
CLCN4-204ENST00000454850 SPG21Q9NZD8 308 aa11.28□□□□□ -0.6
CLCN4-204ENST00000454850 DBR1Q9UK59 544 aaKnown RBP11.28□□□□□ -0.6
CLCN4-204ENST00000454850 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.27□□□□□ -0.61
CLCN4-204ENST00000454850 CCDC69A6NI79 296 aa11.27□□□□□ -0.61
CLCN4-204ENST00000454850 ZBTB42B2RXF5 422 aa11.27□□□□□ -0.61
CLCN4-204ENST00000454850 NT5C1B-RDH14C9J2C7 533 aa11.27□□□□□ -0.61
CLCN4-204ENST00000454850 HOXA2O43364 376 aa11.27□□□□□ -0.61
CLCN4-204ENST00000454850 PRC1O43663 620 aa11.27□□□□□ -0.61
CLCN4-204ENST00000454850 CCNE2O96020 404 aa11.27□□□□□ -0.61
CLCN4-204ENST00000454850 SMARCA1P28370 1054 aa11.27□□□□□ -0.61
CLCN4-204ENST00000454850 SLC26A2P50443 739 aa11.27□□□□□ -0.61
CLCN4-204ENST00000454850 METAP2P50579 478 aaKnown RBP eCLIP11.27□□□□□ -0.61
CLCN4-204ENST00000454850 CRYBB1P53674 252 aaPredicted RBP11.27□□□□□ -0.61
CLCN4-204ENST00000454850 DSC3Q14574 896 aa11.27□□□□□ -0.61
CLCN4-204ENST00000454850 ZNF484Q5JVG2 852 aa11.27□□□□□ -0.61
CLCN4-204ENST00000454850 CWF19L1Q69YN2 538 aaKnown RBP11.27□□□□□ -0.61
CLCN4-204ENST00000454850 MRPL43Q8N983 215 aaKnown RBP11.27□□□□□ -0.61
CLCN4-204ENST00000454850 TMEM87AQ8NBN3 555 aa11.27□□□□□ -0.61
CLCN4-204ENST00000454850 HELQQ8TDG4 1101 aa11.27□□□□□ -0.61
CLCN4-204ENST00000454850 AUTS2Q8WXX7 1259 aa11.27□□□□□ -0.61
CLCN4-204ENST00000454850 ZNF668Q96K58 619 aaPredicted RBP11.27□□□□□ -0.61
CLCN4-204ENST00000454850 ELAC1Q9H777 363 aaKnown RBP11.27□□□□□ -0.61
CLCN4-204ENST00000454850 AGO4Q9HCK5 861 aaKnown RBP11.27□□□□□ -0.61
CLCN4-204ENST00000454850 ZNF302Q9NR11 478 aa11.27□□□□□ -0.61
CLCN4-204ENST00000454850 OTOGLQ3ZCN5 2332 aa11.27□□□□□ -0.61
CLCN4-204ENST00000454850 COL1A2P08123 1366 aa11.27□□□□□ -0.61
CLCN4-204ENST00000454850 FANCMQ8IYD8 2048 aa11.26□□□□□ -0.61
CLCN4-204ENST00000454850 DOCK8Q8NF50 2099 aa11.26□□□□□ -0.61
CLCN4-204ENST00000454850 SPDYE4A6NLX3 237 aa11.26□□□□□ -0.61
CLCN4-204ENST00000454850 PI15O43692 258 aa11.26□□□□□ -0.61
CLCN4-204ENST00000454850 ATG7O95352 703 aa11.26□□□□□ -0.61
CLCN4-204ENST00000454850 C22orf31O95567 290 aa11.26□□□□□ -0.61
CLCN4-204ENST00000454850 CXCL14O95715 111 aa11.26□□□□□ -0.61
CLCN4-204ENST00000454850 GSPT1P15170 499 aaKnown RBP11.26□□□□□ -0.61
CLCN4-204ENST00000454850 EPCAMP16422 314 aa11.26□□□□□ -0.61
CLCN4-204ENST00000454850 ZNF76P36508 570 aa11.26□□□□□ -0.61
CLCN4-204ENST00000454850 CLCN3P51790 818 aa11.26□□□□□ -0.61
CLCN4-204ENST00000454850 CLCN5P51795 746 aa11.26□□□□□ -0.61
CLCN4-204ENST00000454850 NAPAP54920 295 aa11.26□□□□□ -0.61
CLCN4-204ENST00000454850 FAM189BP81408 668 aa11.26□□□□□ -0.61
CLCN4-204ENST00000454850 CEP55Q53EZ4 464 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms