RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 FTHL17Q9BXU8 183 aa16.37■□□□□ 0.21
HSPG2-207ENST00000453796 TSPYL2Q9H2G4 693 aaPredicted RBP16.37■□□□□ 0.21
HSPG2-207ENST00000453796 NOC2LQ9Y3T9 749 aaKnown RBP16.37■□□□□ 0.21
HSPG2-207ENST00000453796 ST18O60284 1047 aa16.36■□□□□ 0.21
HSPG2-207ENST00000453796 MGEA5O60502 916 aa16.36■□□□□ 0.21
HSPG2-207ENST00000453796 BAG4O95429 457 aaKnown RBP16.36■□□□□ 0.21
HSPG2-207ENST00000453796 P4HBP07237 508 aaKnown RBP16.36■□□□□ 0.21
HSPG2-207ENST00000453796 IGFBP4P22692 258 aa16.36■□□□□ 0.21
HSPG2-207ENST00000453796 QARSP47897 775 aaKnown RBP16.36■□□□□ 0.21
HSPG2-207ENST00000453796 PAK2Q13177 524 aa16.36■□□□□ 0.21
HSPG2-207ENST00000453796 TMEM266Q2M3C6 531 aa16.36■□□□□ 0.21
HSPG2-207ENST00000453796 MTERF2Q49AM1 385 aa16.36■□□□□ 0.21
HSPG2-207ENST00000453796 FAM43BQ6ZT52 329 aaPredicted RBP16.36■□□□□ 0.21
HSPG2-207ENST00000453796 FAM228AQ86W67 206 aa16.36■□□□□ 0.21
HSPG2-207ENST00000453796 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.36■□□□□ 0.21
HSPG2-207ENST00000453796 ZNF689Q96CS4 500 aaPredicted RBP16.36■□□□□ 0.21
HSPG2-207ENST00000453796 MTMR9Q96QG7 549 aa16.36■□□□□ 0.21
HSPG2-207ENST00000453796 PPP1R16BQ96T49 567 aa16.36■□□□□ 0.21
HSPG2-207ENST00000453796 OSMRQ99650 979 aa16.36■□□□□ 0.21
HSPG2-207ENST00000453796 ADAMTS10Q9H324 1103 aa16.36■□□□□ 0.21
HSPG2-207ENST00000453796 FOXP1Q9H334 677 aaPredicted RBP16.36■□□□□ 0.21
HSPG2-207ENST00000453796 UPF2Q9HAU5 1272 aaKnown RBP16.36■□□□□ 0.21
HSPG2-207ENST00000453796 SEPT9Q9UHD8 586 aaPredicted RBP16.36■□□□□ 0.21
HSPG2-207ENST00000453796 GINS2Q9Y248 185 aa16.36■□□□□ 0.21
HSPG2-207ENST00000453796 MTCH2Q9Y6C9 303 aa16.36■□□□□ 0.21
HSPG2-207ENST00000453796 A0A0C4DFX4 3053 aa16.36■□□□□ 0.21
HSPG2-207ENST00000453796 NEMFO60524 1076 aa16.35■□□□□ 0.21
HSPG2-207ENST00000453796 RPS6KA5O75582 802 aa16.35■□□□□ 0.21
HSPG2-207ENST00000453796 LINC00271P0C7V0 271 aa16.35■□□□□ 0.21
HSPG2-207ENST00000453796 TMOD1P28289 359 aa16.35■□□□□ 0.21
HSPG2-207ENST00000453796 GPC3P51654 580 aa16.35■□□□□ 0.21
HSPG2-207ENST00000453796 NLRP11P59045 1033 aaKnown RBP16.35■□□□□ 0.21
HSPG2-207ENST00000453796 TBC1D8BQ0IIM8 1120 aa16.35■□□□□ 0.21
HSPG2-207ENST00000453796 GRB10Q13322 594 aa16.35■□□□□ 0.21
HSPG2-207ENST00000453796 DRP2Q13474 957 aa16.35■□□□□ 0.21
HSPG2-207ENST00000453796 SAFBQ15424 915 aaKnown RBP eCLIP16.35■□□□□ 0.21
HSPG2-207ENST00000453796 C4orf19Q8IY42 314 aa16.35■□□□□ 0.21
HSPG2-207ENST00000453796 ZNF710Q8N1W2 664 aa16.35■□□□□ 0.21
HSPG2-207ENST00000453796 TMX3Q96JJ7 454 aa16.35■□□□□ 0.21
HSPG2-207ENST00000453796 MAP7D2Q96T17 732 aa16.35■□□□□ 0.21
HSPG2-207ENST00000453796 YME1L1Q96TA2 773 aa16.35■□□□□ 0.21
HSPG2-207ENST00000453796 SH2D3AQ9BRG2 576 aa16.35■□□□□ 0.21
HSPG2-207ENST00000453796 C17orf80Q9BSJ5 609 aa16.35■□□□□ 0.21
HSPG2-207ENST00000453796 TMEM60Q9H2L4 133 aa16.35■□□□□ 0.21
HSPG2-207ENST00000453796 SUGCTQ9HAC7 445 aa16.35■□□□□ 0.21
HSPG2-207ENST00000453796 ST3GAL5Q9UNP4 418 aa16.35■□□□□ 0.21
HSPG2-207ENST00000453796 AKT3Q9Y243 479 aa16.35■□□□□ 0.21
HSPG2-207ENST00000453796 SPTBN5Q9NRC6 3674 aaKnown RBP16.34■□□□□ 0.21
HSPG2-207ENST00000453796 DDX11L8A8MPP1 907 aa16.34■□□□□ 0.21
HSPG2-207ENST00000453796 DKC1O60832 514 aaKnown RBP eCLIP16.34■□□□□ 0.21
HSPG2-207ENST00000453796 MAFO75444 373 aaPredicted RBP16.34■□□□□ 0.21
HSPG2-207ENST00000453796 DGKIO75912 1065 aa16.34■□□□□ 0.21
HSPG2-207ENST00000453796 NFX1Q12986 1120 aaKnown RBP16.34■□□□□ 0.21
HSPG2-207ENST00000453796 CALCRLQ16602 461 aa16.34■□□□□ 0.21
HSPG2-207ENST00000453796 PLA2G4FQ68DD2 849 aa16.34■□□□□ 0.21
HSPG2-207ENST00000453796 NCAPH2Q6IBW4 605 aa16.34■□□□□ 0.21
HSPG2-207ENST00000453796 FAM184AQ8NB25 1140 aa16.34■□□□□ 0.21
HSPG2-207ENST00000453796 GDPD5Q8WTR4 605 aa16.34■□□□□ 0.21
HSPG2-207ENST00000453796 DYDC2Q96IM9 177 aa16.34■□□□□ 0.21
HSPG2-207ENST00000453796 LXNQ9BS40 222 aa16.34■□□□□ 0.21
HSPG2-207ENST00000453796 RGL1Q9NZL6 768 aa16.34■□□□□ 0.21
HSPG2-207ENST00000453796 PCDHA12Q9UN75 941 aa16.34■□□□□ 0.21
HSPG2-207ENST00000453796 GPR182O15218 404 aa16.33■□□□□ 0.2
HSPG2-207ENST00000453796 MARCH6O60337 910 aa16.33■□□□□ 0.2
HSPG2-207ENST00000453796 NPEPPSP55786 919 aa16.33■□□□□ 0.2
HSPG2-207ENST00000453796 DSC3Q14574 896 aa16.33■□□□□ 0.2
HSPG2-207ENST00000453796 ODR4Q5SWX8 454 aa16.33■□□□□ 0.2
HSPG2-207ENST00000453796 NPAS4Q8IUM7 802 aa16.33■□□□□ 0.2
HSPG2-207ENST00000453796 ZNF579Q8NAF0 562 aaKnown RBP16.33■□□□□ 0.2
HSPG2-207ENST00000453796 SAMD11Q96NU1 681 aa16.33■□□□□ 0.2
HSPG2-207ENST00000453796 TTC12Q9H892 705 aaPredicted RBP16.33■□□□□ 0.2
HSPG2-207ENST00000453796 CYP26B1Q9NR63 512 aa16.33■□□□□ 0.2
HSPG2-207ENST00000453796 MTUS1Q9ULD2 1270 aa16.33■□□□□ 0.2
HSPG2-207ENST00000453796 ADGRA3Q8IWK6 1321 aa16.33■□□□□ 0.2
HSPG2-207ENST00000453796 VCANP13611 3396 aa16.33■□□□□ 0.2
HSPG2-207ENST00000453796 C9IYK1 514 aa16.32■□□□□ 0.2
HSPG2-207ENST00000453796 SLITRK3O94933 977 aa16.32■□□□□ 0.2
HSPG2-207ENST00000453796 EIF4BP23588 611 aaKnown RBP16.32■□□□□ 0.2
HSPG2-207ENST00000453796 U2AF2P26368 475 aaKnown RBP eCLIP16.32■□□□□ 0.2
HSPG2-207ENST00000453796 TXKP42681 527 aa16.32■□□□□ 0.2
HSPG2-207ENST00000453796 SARSP49591 514 aaKnown RBP16.32■□□□□ 0.2
HSPG2-207ENST00000453796 ORC2Q13416 577 aaPredicted RBP16.32■□□□□ 0.2
HSPG2-207ENST00000453796 CTTNQ14247 550 aaKnown RBP16.32■□□□□ 0.2
HSPG2-207ENST00000453796 CCDC85BQ15834 202 aaPredicted RBP16.32■□□□□ 0.2
HSPG2-207ENST00000453796 NOSTRINQ8IVI9 506 aa16.32■□□□□ 0.2
HSPG2-207ENST00000453796 FBXO22Q8NEZ5 403 aa16.32■□□□□ 0.2
HSPG2-207ENST00000453796 PPM1EQ8WY54 764 aa16.32■□□□□ 0.2
HSPG2-207ENST00000453796 ZNF668Q96K58 619 aaPredicted RBP16.32■□□□□ 0.2
HSPG2-207ENST00000453796 ADAM2Q99965 735 aa16.32■□□□□ 0.2
HSPG2-207ENST00000453796 HSD17B14Q9BPX1 270 aa16.32■□□□□ 0.2
HSPG2-207ENST00000453796 EIF2AK1Q9BQI3 630 aaKnown RBP16.32■□□□□ 0.2
HSPG2-207ENST00000453796 DHX33Q9H6R0 707 aaKnown RBP16.32■□□□□ 0.2
HSPG2-207ENST00000453796 PRDM6Q9NQX0 595 aa16.32■□□□□ 0.2
HSPG2-207ENST00000453796 RGS18Q9NS28 235 aa16.32■□□□□ 0.2
HSPG2-207ENST00000453796 LMCD1Q9NZU5 365 aa16.32■□□□□ 0.2
HSPG2-207ENST00000453796 PPME1Q9Y570 386 aa16.32■□□□□ 0.2
HSPG2-207ENST00000453796 ZBTB39O15060 712 aa16.31■□□□□ 0.2
HSPG2-207ENST00000453796 GTPBP6O43824 516 aaPredicted RBP16.31■□□□□ 0.2
HSPG2-207ENST00000453796 LYPLA2O95372 231 aa16.31■□□□□ 0.2
HSPG2-207ENST00000453796 DARSP14868 501 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms