RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 ZNF710Q8N1W2 664 aa18.08■□□□□ 0.48
SCAMP4-205ENST00000452128 LRRC71Q8N4P6 559 aa18.08■□□□□ 0.48
SCAMP4-205ENST00000452128 EIF2AK1Q9BQI3 630 aaKnown RBP18.08■□□□□ 0.48
SCAMP4-205ENST00000452128 SH2D3AQ9BRG2 576 aa18.08■□□□□ 0.48
SCAMP4-205ENST00000452128 SLC28A3Q9HAS3 691 aa18.08■□□□□ 0.48
SCAMP4-205ENST00000452128 A0A0C4DFX4 3053 aa18.08■□□□□ 0.48
SCAMP4-205ENST00000452128 EVPLQ92817 2033 aa18.07■□□□□ 0.48
SCAMP4-205ENST00000452128 ATP2B1P20020 1258 aa18.07■□□□□ 0.48
SCAMP4-205ENST00000452128 NBR1Q14596 966 aa18.07■□□□□ 0.48
SCAMP4-205ENST00000452128 KIZQ2M2Z5 673 aa18.07■□□□□ 0.48
SCAMP4-205ENST00000452128 TTC38Q5R3I4 469 aa18.07■□□□□ 0.48
SCAMP4-205ENST00000452128 NCAPH2Q6IBW4 605 aa18.07■□□□□ 0.48
SCAMP4-205ENST00000452128 METTL13Q8N6R0 699 aa18.07■□□□□ 0.48
SCAMP4-205ENST00000452128 MYLIPQ8WY64 445 aa18.07■□□□□ 0.48
SCAMP4-205ENST00000452128 LXNQ9BS40 222 aa18.07■□□□□ 0.48
SCAMP4-205ENST00000452128 TSPYL2Q9H2G4 693 aaPredicted RBP18.07■□□□□ 0.48
SCAMP4-205ENST00000452128 DHX33Q9H6R0 707 aaKnown RBP18.07■□□□□ 0.48
SCAMP4-205ENST00000452128 ZSWIM4Q9H7M6 989 aa18.07■□□□□ 0.48
SCAMP4-205ENST00000452128 RC3H2Q9HBD1 1191 aaKnown RBP18.07■□□□□ 0.48
SCAMP4-205ENST00000452128 CYP26B1Q9NR63 512 aa18.07■□□□□ 0.48
SCAMP4-205ENST00000452128 MICAL3Q7RTP6 2002 aa18.06■□□□□ 0.48
SCAMP4-205ENST00000452128 EPOPA6NHQ4 379 aa18.06■□□□□ 0.48
SCAMP4-205ENST00000452128 TLL1O43897 1013 aa18.06■□□□□ 0.48
SCAMP4-205ENST00000452128 MGEA5O60502 916 aa18.06■□□□□ 0.48
SCAMP4-205ENST00000452128 AMHP03971 560 aa18.06■□□□□ 0.48
SCAMP4-205ENST00000452128 LINC00271P0C7V0 271 aa18.06■□□□□ 0.48
SCAMP4-205ENST00000452128 TBC1D8BQ0IIM8 1120 aa18.06■□□□□ 0.48
SCAMP4-205ENST00000452128 CTTNQ14247 550 aaKnown RBP18.06■□□□□ 0.48
SCAMP4-205ENST00000452128 DSC3Q14574 896 aa18.06■□□□□ 0.48
SCAMP4-205ENST00000452128 MTERF2Q49AM1 385 aa18.06■□□□□ 0.48
SCAMP4-205ENST00000452128 PLA2G4FQ68DD2 849 aa18.06■□□□□ 0.48
SCAMP4-205ENST00000452128 SEPT9Q9UHD8 586 aaPredicted RBP18.06■□□□□ 0.48
SCAMP4-205ENST00000452128 PPME1Q9Y570 386 aa18.06■□□□□ 0.48
SCAMP4-205ENST00000452128 PCDHB6Q9Y5E3 794 aa18.06■□□□□ 0.48
SCAMP4-205ENST00000452128 TTC3P53804 2025 aa18.06■□□□□ 0.48
SCAMP4-205ENST00000452128 MARCH6O60337 910 aa18.05■□□□□ 0.48
SCAMP4-205ENST00000452128 DKC1O60832 514 aaKnown RBP eCLIP18.05■□□□□ 0.48
SCAMP4-205ENST00000452128 POU3F3P20264 500 aaPredicted RBP18.05■□□□□ 0.48
SCAMP4-205ENST00000452128 GPC3P51654 580 aa18.05■□□□□ 0.48
SCAMP4-205ENST00000452128 NLRP11P59045 1033 aaKnown RBP18.05■□□□□ 0.48
SCAMP4-205ENST00000452128 FAM189BP81408 668 aa18.05■□□□□ 0.48
SCAMP4-205ENST00000452128 IL17AQ16552 155 aa18.05■□□□□ 0.48
SCAMP4-205ENST00000452128 TMEM266Q2M3C6 531 aa18.05■□□□□ 0.48
SCAMP4-205ENST00000452128 FAM228AQ86W67 206 aa18.05■□□□□ 0.48
SCAMP4-205ENST00000452128 MYOCDQ8IZQ8 938 aa18.05■□□□□ 0.48
SCAMP4-205ENST00000452128 ZNF689Q96CS4 500 aaPredicted RBP18.05■□□□□ 0.48
SCAMP4-205ENST00000452128 PRDM12Q9H4Q4 367 aa18.05■□□□□ 0.48
SCAMP4-205ENST00000452128 SUGCTQ9HAC7 445 aa18.05■□□□□ 0.48
SCAMP4-205ENST00000452128 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.05■□□□□ 0.48
SCAMP4-205ENST00000452128 ST3GAL5Q9UNP4 418 aa18.05■□□□□ 0.48
SCAMP4-205ENST00000452128 SMC3Q9UQE7 1217 aa18.05■□□□□ 0.48
SCAMP4-205ENST00000452128 KIF3AQ9Y496 699 aa18.05■□□□□ 0.48
SCAMP4-205ENST00000452128 INSL6Q9Y581 213 aa18.05■□□□□ 0.48
SCAMP4-205ENST00000452128 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.05■□□□□ 0.48
SCAMP4-205ENST00000452128 GBF1Q92538 1859 aa18.05■□□□□ 0.48
SCAMP4-205ENST00000452128 LINC01553A4QN01 128 aa18.04■□□□□ 0.48
SCAMP4-205ENST00000452128 POTEMA6NI47 508 aa18.04■□□□□ 0.48
SCAMP4-205ENST00000452128 M0QZ92 97 aa18.04■□□□□ 0.48
SCAMP4-205ENST00000452128 OR52Z1P0C646 297 aa18.04■□□□□ 0.48
SCAMP4-205ENST00000452128 XRCC6P12956 609 aaKnown RBP eCLIP18.04■□□□□ 0.48
SCAMP4-205ENST00000452128 TMOD1P28289 359 aa18.04■□□□□ 0.48
SCAMP4-205ENST00000452128 YWHABP31946 246 aaKnown RBP18.04■□□□□ 0.48
SCAMP4-205ENST00000452128 FXR2P51116 673 aaKnown RBP eCLIP18.04■□□□□ 0.48
SCAMP4-205ENST00000452128 ERVK-21P61565 698 aa18.04■□□□□ 0.48
SCAMP4-205ENST00000452128 CYP4A11Q02928 519 aa18.04■□□□□ 0.48
SCAMP4-205ENST00000452128 PPP2R2DQ66LE6 453 aa18.04■□□□□ 0.48
SCAMP4-205ENST00000452128 CATSPER3Q86XQ3 398 aa18.04■□□□□ 0.48
SCAMP4-205ENST00000452128 NEK9Q8TD19 979 aa18.04■□□□□ 0.48
SCAMP4-205ENST00000452128 SNX21Q969T3 373 aa18.04■□□□□ 0.48
SCAMP4-205ENST00000452128 OSMRQ99650 979 aa18.04■□□□□ 0.48
SCAMP4-205ENST00000452128 FTHL17Q9BXU8 183 aa18.04■□□□□ 0.48
SCAMP4-205ENST00000452128 COL4A6Q14031 1691 aa18.03■□□□□ 0.48
SCAMP4-205ENST00000452128 LPXNO60711 386 aa18.03■□□□□ 0.48
SCAMP4-205ENST00000452128 MED24O75448 989 aa18.03■□□□□ 0.48
SCAMP4-205ENST00000452128 DARSP14868 501 aaKnown RBP18.03■□□□□ 0.48
SCAMP4-205ENST00000452128 EIF4BP23588 611 aaKnown RBP18.03■□□□□ 0.48
SCAMP4-205ENST00000452128 PAK2Q13177 524 aa18.03■□□□□ 0.48
SCAMP4-205ENST00000452128 PTGDRQ13258 359 aa18.03■□□□□ 0.48
SCAMP4-205ENST00000452128 FAM117BQ6P1L5 589 aa18.03■□□□□ 0.48
SCAMP4-205ENST00000452128 TPH2Q8IWU9 490 aa18.03■□□□□ 0.48
SCAMP4-205ENST00000452128 IGSF22Q8N9C0 903 aa18.03■□□□□ 0.48
SCAMP4-205ENST00000452128 INTS4Q96HW7 963 aaKnown RBP18.03■□□□□ 0.48
SCAMP4-205ENST00000452128 CEP170P1Q96L14 293 aa18.03■□□□□ 0.48
SCAMP4-205ENST00000452128 POLR3CQ9BUI4 534 aaPredicted RBP18.03■□□□□ 0.48
SCAMP4-205ENST00000452128 XPNPEP1Q9NQW7 623 aa18.03■□□□□ 0.48
SCAMP4-205ENST00000452128 ANKEF1Q9NU02 776 aa18.03■□□□□ 0.48
SCAMP4-205ENST00000452128 A0A087WWV3 80 aa18.02■□□□□ 0.48
SCAMP4-205ENST00000452128 C9IYK1 514 aa18.02■□□□□ 0.48
SCAMP4-205ENST00000452128 GPR182O15218 404 aa18.02■□□□□ 0.48
SCAMP4-205ENST00000452128 RPS6KA5O75582 802 aa18.02■□□□□ 0.48
SCAMP4-205ENST00000452128 DGKIO75912 1065 aa18.02■□□□□ 0.48
SCAMP4-205ENST00000452128 TECP42680 631 aa18.02■□□□□ 0.48
SCAMP4-205ENST00000452128 CDC42EP1Q00587 391 aa18.02■□□□□ 0.48
SCAMP4-205ENST00000452128 PDIA5Q14554 519 aa18.02■□□□□ 0.48
SCAMP4-205ENST00000452128 ECM1Q16610 540 aa18.02■□□□□ 0.48
SCAMP4-205ENST00000452128 LARP1BQ659C4 914 aaKnown RBP18.02■□□□□ 0.48
SCAMP4-205ENST00000452128 MAP7D2Q96T17 732 aa18.02■□□□□ 0.48
SCAMP4-205ENST00000452128 PPP1R16BQ96T49 567 aa18.02■□□□□ 0.48
SCAMP4-205ENST00000452128 ZBED2Q9BTP6 218 aa18.02■□□□□ 0.48
SCAMP4-205ENST00000452128 IFT122Q9HBG6 1241 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms