RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 RRAGBQ5VZM2 374 aa26.79■■□□□ 1.88
CPSF4-207ENST00000451876 EFCAB12Q6NXP0 572 aa26.79■■□□□ 1.88
CPSF4-207ENST00000451876 KCTD17Q8N5Z5 321 aa26.79■■□□□ 1.88
CPSF4-207ENST00000451876 TMEM87AQ8NBN3 555 aa26.79■■□□□ 1.88
CPSF4-207ENST00000451876 DNAJB3Q8WWF6 145 aa26.79■■□□□ 1.88
CPSF4-207ENST00000451876 SLC7A3Q8WY07 619 aa26.79■■□□□ 1.88
CPSF4-207ENST00000451876 SUGCTQ9HAC7 445 aa26.79■■□□□ 1.88
CPSF4-207ENST00000451876 XPNPEP1Q9NQW7 623 aa26.79■■□□□ 1.88
CPSF4-207ENST00000451876 FAM13BQ9NYF5 915 aa26.79■■□□□ 1.88
CPSF4-207ENST00000451876 PPME1Q9Y570 386 aa26.79■■□□□ 1.88
CPSF4-207ENST00000451876 SMIM35A0A1B0GVV1 85 aa26.79■■□□□ 1.88
CPSF4-207ENST00000451876 TRIM43BA6NCK2 446 aa26.79■■□□□ 1.88
CPSF4-207ENST00000451876 PFKFB1P16118 471 aa26.79■■□□□ 1.88
CPSF4-207ENST00000451876 RFC5P40937 340 aa26.79■■□□□ 1.88
CPSF4-207ENST00000451876 EMC2Q15006 297 aa26.79■■□□□ 1.88
CPSF4-207ENST00000451876 E2F4Q16254 413 aa26.79■■□□□ 1.88
CPSF4-207ENST00000451876 TAF2Q6P1X5 1199 aa26.79■■□□□ 1.88
CPSF4-207ENST00000451876 PADI6Q6TGC4 694 aa26.79■■□□□ 1.88
CPSF4-207ENST00000451876 RAD54LQ92698 747 aa26.79■■□□□ 1.88
CPSF4-207ENST00000451876 TRIM43Q96BQ3 446 aaPredicted RBP26.79■■□□□ 1.88
CPSF4-207ENST00000451876 PPP1R12CQ9BZL4 782 aa26.79■■□□□ 1.88
CPSF4-207ENST00000451876 GOLPH3LQ9H4A5 285 aa26.79■■□□□ 1.88
CPSF4-207ENST00000451876 DGAT1O75907 488 aa26.78■■□□□ 1.88
CPSF4-207ENST00000451876 PLA2G4BP0C869 781 aa26.78■■□□□ 1.88
CPSF4-207ENST00000451876 ITGB8P26012 769 aa26.78■■□□□ 1.88
CPSF4-207ENST00000451876 SLC12A3P55017 1021 aa26.78■■□□□ 1.88
CPSF4-207ENST00000451876 CCDC73Q6ZRK6 1079 aa26.78■■□□□ 1.88
CPSF4-207ENST00000451876 KIAA0319LQ8IZA0 1049 aa26.78■■□□□ 1.88
CPSF4-207ENST00000451876 NOC4LQ9BVI4 516 aaKnown RBP26.78■■□□□ 1.88
CPSF4-207ENST00000451876 HPSEQ9Y251 543 aa26.78■■□□□ 1.88
CPSF4-207ENST00000451876 SCN5AQ14524 2016 aa26.78■■□□□ 1.88
CPSF4-207ENST00000451876 SSBP05455 408 aaKnown RBP eCLIP26.77■■□□□ 1.88
CPSF4-207ENST00000451876 STAT6P42226 847 aa26.77■■□□□ 1.88
CPSF4-207ENST00000451876 MCM6Q14566 821 aa26.77■■□□□ 1.88
CPSF4-207ENST00000451876 SYT2Q8N9I0 419 aaPredicted RBP26.77■■□□□ 1.88
CPSF4-207ENST00000451876 FSIP1Q8NA03 581 aa26.77■■□□□ 1.88
CPSF4-207ENST00000451876 RETREG2Q8NC44 543 aa26.77■■□□□ 1.88
CPSF4-207ENST00000451876 MRPS27Q92552 414 aaKnown RBP26.77■■□□□ 1.88
CPSF4-207ENST00000451876 LARP4BQ92615 738 aaKnown RBP26.77■■□□□ 1.88
CPSF4-207ENST00000451876 DHX58Q96C10 678 aa26.77■■□□□ 1.88
CPSF4-207ENST00000451876 RUSC1Q9BVN2 902 aa26.77■■□□□ 1.88
CPSF4-207ENST00000451876 HIPK3Q9H422 1215 aa26.77■■□□□ 1.88
CPSF4-207ENST00000451876 STK17AQ9UEE5 414 aa26.77■■□□□ 1.88
CPSF4-207ENST00000451876 KCNH3Q9ULD8 1083 aa26.77■■□□□ 1.88
CPSF4-207ENST00000451876 KIAA0355O15063 1070 aa26.76■■□□□ 1.87
CPSF4-207ENST00000451876 POLR2DO15514 142 aaKnown RBP26.76■■□□□ 1.87
CPSF4-207ENST00000451876 GADD45BO75293 160 aaPredicted RBP26.76■■□□□ 1.87
CPSF4-207ENST00000451876 THPOP40225 353 aa26.76■■□□□ 1.87
CPSF4-207ENST00000451876 TMEM62Q0P6H9 643 aa26.76■■□□□ 1.87
CPSF4-207ENST00000451876 DHX8Q14562 1220 aaKnown RBP26.76■■□□□ 1.87
CPSF4-207ENST00000451876 CSPP1Q1MSJ5 1256 aa26.76■■□□□ 1.87
CPSF4-207ENST00000451876 TMEM143Q96AN5 459 aa26.76■■□□□ 1.87
CPSF4-207ENST00000451876 MTRQ99707 1265 aa26.76■■□□□ 1.87
CPSF4-207ENST00000451876 ATP6V0A4Q9HBG4 840 aa26.76■■□□□ 1.87
CPSF4-207ENST00000451876 MYH11P35749 1972 aa26.76■■□□□ 1.87
CPSF4-207ENST00000451876 FAM237AA0A1B0GTK4 181 aa26.76■■□□□ 1.87
CPSF4-207ENST00000451876 CKBP12277 381 aa26.76■■□□□ 1.87
CPSF4-207ENST00000451876 NDUFA8P51970 172 aa26.76■■□□□ 1.87
CPSF4-207ENST00000451876 RBL2Q08999 1139 aa26.76■■□□□ 1.87
CPSF4-207ENST00000451876 MAEAQ7L5Y9 396 aa26.76■■□□□ 1.87
CPSF4-207ENST00000451876 CAGE1Q8TC20 777 aa26.76■■□□□ 1.87
CPSF4-207ENST00000451876 GOLGA6L4A6NEF3 574 aa26.75■■□□□ 1.87
CPSF4-207ENST00000451876 VTNP04004 478 aa26.75■■□□□ 1.87
CPSF4-207ENST00000451876 CTSHP09668 335 aa26.75■■□□□ 1.87
CPSF4-207ENST00000451876 SYN1P17600 705 aa26.75■■□□□ 1.87
CPSF4-207ENST00000451876 RINT1Q6NUQ1 792 aa26.75■■□□□ 1.87
CPSF4-207ENST00000451876 WNT8AQ9H1J5 351 aa26.75■■□□□ 1.87
CPSF4-207ENST00000451876 GPRC5CQ9NQ84 441 aa26.75■■□□□ 1.87
CPSF4-207ENST00000451876 ZMYND8Q9ULU4 1186 aaPredicted RBP26.75■■□□□ 1.87
CPSF4-207ENST00000451876 PITPNM1O00562 1244 aa26.74■■□□□ 1.87
CPSF4-207ENST00000451876 CYP2C18P33260 490 aa26.74■■□□□ 1.87
CPSF4-207ENST00000451876 ZNF618Q5T7W0 954 aa26.74■■□□□ 1.87
CPSF4-207ENST00000451876 TRAF7Q6Q0C0 670 aa26.74■■□□□ 1.87
CPSF4-207ENST00000451876 RPAINQ86UA6 219 aa26.74■■□□□ 1.87
CPSF4-207ENST00000451876 PPP1R16BQ96T49 567 aa26.74■■□□□ 1.87
CPSF4-207ENST00000451876 JPH2Q9BR39 696 aaPredicted RBP26.74■■□□□ 1.87
CPSF4-207ENST00000451876 POLD4Q9HCU8 107 aa26.74■■□□□ 1.87
CPSF4-207ENST00000451876 CYP11B2P19099 503 aa26.73■■□□□ 1.87
CPSF4-207ENST00000451876 TMOD1P28289 359 aa26.73■■□□□ 1.87
CPSF4-207ENST00000451876 BFSP2Q13515 415 aa26.73■■□□□ 1.87
CPSF4-207ENST00000451876 C1orf186Q6ZWK4 172 aa26.73■■□□□ 1.87
CPSF4-207ENST00000451876 EXOC8Q8IYI6 725 aa26.73■■□□□ 1.87
CPSF4-207ENST00000451876 AKT3Q9Y243 479 aa26.73■■□□□ 1.87
CPSF4-207ENST00000451876 CEP290O15078 2479 aa26.73■■□□□ 1.87
CPSF4-207ENST00000451876 PDE4DIPQ5VU43 2346 aa26.72■■□□□ 1.87
CPSF4-207ENST00000451876 ARSHQ5FYA8 562 aa26.72■■□□□ 1.87
CPSF4-207ENST00000451876 CCDC155Q8N6L0 562 aa26.72■■□□□ 1.87
CPSF4-207ENST00000451876 IQUBQ8NA54 791 aa26.72■■□□□ 1.87
CPSF4-207ENST00000451876 GBP4Q96PP9 640 aa26.72■■□□□ 1.87
CPSF4-207ENST00000451876 MAP7D2Q96T17 732 aa26.72■■□□□ 1.87
CPSF4-207ENST00000451876 PRKAG2Q9UGJ0 569 aa26.72■■□□□ 1.87
CPSF4-207ENST00000451876 GAS2O43903 313 aaKnown RBP26.72■■□□□ 1.87
CPSF4-207ENST00000451876 PRPF40AO75400 957 aaKnown RBP26.72■■□□□ 1.87
CPSF4-207ENST00000451876 TIMP1P01033 207 aa26.72■■□□□ 1.87
CPSF4-207ENST00000451876 RAG1P15918 1043 aa26.72■■□□□ 1.87
CPSF4-207ENST00000451876 CCL23P55773 120 aa26.72■■□□□ 1.87
CPSF4-207ENST00000451876 RAD51AP2Q09MP3 1159 aa26.72■■□□□ 1.87
CPSF4-207ENST00000451876 RSPH3Q86UC2 560 aa26.72■■□□□ 1.87
CPSF4-207ENST00000451876 GPBP1Q86WP2 473 aa26.72■■□□□ 1.87
CPSF4-207ENST00000451876 MCPH1Q8NEM0 835 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms