RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 PPP2CAP67775 309 aa6.26□□□□□ -1.41
GTF3C3-207ENST00000451088 DBX2Q6ZNG2 339 aa6.26□□□□□ -1.41
GTF3C3-207ENST00000451088 ZC3H7AQ8IWR0 971 aaKnown RBP6.26□□□□□ -1.41
GTF3C3-207ENST00000451088 SREK1Q8WXA9 508 aaKnown RBP6.26□□□□□ -1.41
GTF3C3-207ENST00000451088 MRPL4Q9BYD3 311 aaKnown RBP6.26□□□□□ -1.41
GTF3C3-207ENST00000451088 KRTAP3-1Q9BYR8 98 aa6.26□□□□□ -1.41
GTF3C3-207ENST00000451088 SLC39A2Q9NP94 309 aa6.26□□□□□ -1.41
GTF3C3-207ENST00000451088 RIC8BQ9NVN3 520 aa6.26□□□□□ -1.41
GTF3C3-207ENST00000451088 NDOR1Q9UHB4 597 aa6.26□□□□□ -1.41
GTF3C3-207ENST00000451088 SAMD9LQ8IVG5 1584 aa6.26□□□□□ -1.41
GTF3C3-207ENST00000451088 CASKIN1Q8WXD9 1431 aa6.25□□□□□ -1.41
GTF3C3-207ENST00000451088 KDM5DQ9BY66 1539 aa6.25□□□□□ -1.41
GTF3C3-207ENST00000451088 KIF3BO15066 747 aa6.25□□□□□ -1.41
GTF3C3-207ENST00000451088 C4BPAP04003 597 aaKnown RBP6.25□□□□□ -1.41
GTF3C3-207ENST00000451088 LILRB2Q8N423 598 aa6.25□□□□□ -1.41
GTF3C3-207ENST00000451088 SCLYQ96I15 445 aa6.25□□□□□ -1.41
GTF3C3-207ENST00000451088 TACO1Q9BSH4 297 aaKnown RBP6.25□□□□□ -1.41
GTF3C3-207ENST00000451088 C1QTNF3Q9BXJ4 246 aa6.25□□□□□ -1.41
GTF3C3-207ENST00000451088 CELF4Q9BZC1 486 aaKnown RBP6.25□□□□□ -1.41
GTF3C3-207ENST00000451088 KATNBL1Q9H079 304 aa6.25□□□□□ -1.41
GTF3C3-207ENST00000451088 OSBPL2Q9H1P3 480 aa6.25□□□□□ -1.41
GTF3C3-207ENST00000451088 SMPD4Q9NXE4 827 aa6.25□□□□□ -1.41
GTF3C3-207ENST00000451088 ZDHHC9Q9Y397 364 aa6.25□□□□□ -1.41
GTF3C3-207ENST00000451088 PTCH2Q9Y6C5 1203 aa6.25□□□□□ -1.41
GTF3C3-207ENST00000451088 NLRP1Q9C000 1473 aa6.25□□□□□ -1.41
GTF3C3-207ENST00000451088 ZC3H13Q5T200 1668 aaKnown RBP6.25□□□□□ -1.41
GTF3C3-207ENST00000451088 ZNF536O15090 1300 aa6.25□□□□□ -1.41
GTF3C3-207ENST00000451088 FYCO1Q9BQS8 1478 aa6.24□□□□□ -1.41
GTF3C3-207ENST00000451088 H0Y858 1186 aa6.24□□□□□ -1.41
GTF3C3-207ENST00000451088 RASGRP1O95267 797 aa6.24□□□□□ -1.41
GTF3C3-207ENST00000451088 KRT15P19012 456 aa6.24□□□□□ -1.41
GTF3C3-207ENST00000451088 DNM2P50570 870 aa6.24□□□□□ -1.41
GTF3C3-207ENST00000451088 HERVK_113P62684 666 aa6.24□□□□□ -1.41
GTF3C3-207ENST00000451088 ADAM17P78536 824 aa6.24□□□□□ -1.41
GTF3C3-207ENST00000451088 GLB1LQ6UWU2 654 aa6.24□□□□□ -1.41
GTF3C3-207ENST00000451088 LIMS2Q7Z4I7 341 aa6.24□□□□□ -1.41
GTF3C3-207ENST00000451088 REXO1L1PQ8IX06 675 aa6.24□□□□□ -1.41
GTF3C3-207ENST00000451088 BORCS6Q96GS4 357 aa6.24□□□□□ -1.41
GTF3C3-207ENST00000451088 MAGEB10Q96LZ2 347 aaPredicted RBP6.24□□□□□ -1.41
GTF3C3-207ENST00000451088 DNAJC2Q99543 621 aaKnown RBP6.24□□□□□ -1.41
GTF3C3-207ENST00000451088 SFMBT1Q9UHJ3 866 aa6.24□□□□□ -1.41
GTF3C3-207ENST00000451088 RGS12O14924 1447 aa6.24□□□□□ -1.41
GTF3C3-207ENST00000451088 FGD6Q6ZV73 1430 aa6.24□□□□□ -1.41
GTF3C3-207ENST00000451088 PZPP20742 1482 aa6.23□□□□□ -1.41
GTF3C3-207ENST00000451088 B4GALT4O60513 344 aa6.23□□□□□ -1.41
GTF3C3-207ENST00000451088 AOAHP28039 575 aa6.23□□□□□ -1.41
GTF3C3-207ENST00000451088 CSF2RBP32927 897 aa6.23□□□□□ -1.41
GTF3C3-207ENST00000451088 ARHGEF18Q6ZSZ5 1173 aa6.23□□□□□ -1.41
GTF3C3-207ENST00000451088 GGNQ86UU5 652 aa6.23□□□□□ -1.41
GTF3C3-207ENST00000451088 NOSTRINQ8IVI9 506 aa6.23□□□□□ -1.41
GTF3C3-207ENST00000451088 NCOA5Q9HCD5 579 aaKnown RBP6.23□□□□□ -1.41
GTF3C3-207ENST00000451088 TRIM39Q9HCM9 518 aa6.23□□□□□ -1.41
GTF3C3-207ENST00000451088 BTBD7Q9P203 1132 aa6.23□□□□□ -1.41
GTF3C3-207ENST00000451088 ARHGAP28Q9P2N2 729 aa6.23□□□□□ -1.41
GTF3C3-207ENST00000451088 JAG2Q9Y219 1238 aa6.23□□□□□ -1.41
GTF3C3-207ENST00000451088 COQ6Q9Y2Z9 468 aa6.23□□□□□ -1.41
GTF3C3-207ENST00000451088 EID1Q9Y6B2 187 aa6.23□□□□□ -1.41
GTF3C3-207ENST00000451088 PLXNC1O60486 1568 aa6.23□□□□□ -1.41
GTF3C3-207ENST00000451088 TCRBV16S1A1N1A0A5B0 115 aa6.22□□□□□ -1.41
GTF3C3-207ENST00000451088 GPR42O15529 346 aa6.22□□□□□ -1.41
GTF3C3-207ENST00000451088 PTGS1P23219 599 aa6.22□□□□□ -1.41
GTF3C3-207ENST00000451088 TOP3AQ13472 1001 aaPredicted RBP6.22□□□□□ -1.41
GTF3C3-207ENST00000451088 SEC23AQ15436 765 aa6.22□□□□□ -1.41
GTF3C3-207ENST00000451088 NFE2L2Q16236 605 aa6.22□□□□□ -1.41
GTF3C3-207ENST00000451088 SLFN13Q68D06 897 aa6.22□□□□□ -1.41
GTF3C3-207ENST00000451088 DPP8Q6V1X1 898 aaPredicted RBP6.22□□□□□ -1.41
GTF3C3-207ENST00000451088 EP400NLQ6ZTU2 488 aa6.22□□□□□ -1.41
GTF3C3-207ENST00000451088 OVCH1Q7RTY7 1134 aa6.22□□□□□ -1.41
GTF3C3-207ENST00000451088 BRAPQ7Z569 592 aa6.22□□□□□ -1.41
GTF3C3-207ENST00000451088 FGD2Q7Z6J4 655 aa6.22□□□□□ -1.41
GTF3C3-207ENST00000451088 RALYLQ86SE5 291 aaKnown RBP6.22□□□□□ -1.41
GTF3C3-207ENST00000451088 DNERQ8NFT8 737 aa6.22□□□□□ -1.41
GTF3C3-207ENST00000451088 LOXL4Q96JB6 756 aa6.22□□□□□ -1.41
GTF3C3-207ENST00000451088 MEGF9Q9H1U4 602 aa6.22□□□□□ -1.41
GTF3C3-207ENST00000451088 SLC4A7Q9Y6M7 1214 aa6.22□□□□□ -1.41
GTF3C3-207ENST00000451088 LRRC9Q6ZRR7 1453 aa6.22□□□□□ -1.41
GTF3C3-207ENST00000451088 COL16A1Q07092 1604 aaPredicted RBP6.21□□□□□ -1.41
GTF3C3-207ENST00000451088 MSH6P52701 1360 aa6.21□□□□□ -1.41
GTF3C3-207ENST00000451088 DHX29Q7Z478 1369 aaKnown RBP6.21□□□□□ -1.41
GTF3C3-207ENST00000451088 ATP7AQ04656 1500 aa6.21□□□□□ -1.42
GTF3C3-207ENST00000451088 NPEPPSL1A6NEC2 478 aa6.21□□□□□ -1.42
GTF3C3-207ENST00000451088 KCNK3O14649 394 aa6.21□□□□□ -1.42
GTF3C3-207ENST00000451088 CUTAO60888 179 aa6.21□□□□□ -1.42
GTF3C3-207ENST00000451088 NPTXRO95502 500 aa6.21□□□□□ -1.42
GTF3C3-207ENST00000451088 CNOT4O95628 575 aaKnown RBP6.21□□□□□ -1.42
GTF3C3-207ENST00000451088 POLD1P28340 1107 aa6.21□□□□□ -1.42
GTF3C3-207ENST00000451088 STILQ15468 1287 aa6.21□□□□□ -1.42
GTF3C3-207ENST00000451088 CPZQ66K79 652 aa6.21□□□□□ -1.42
GTF3C3-207ENST00000451088 ABHD17CQ6PCB6 329 aa6.21□□□□□ -1.42
GTF3C3-207ENST00000451088 CXXC5Q7LFL8 322 aaKnown RBP6.21□□□□□ -1.42
GTF3C3-207ENST00000451088 CISD2Q8N5K1 135 aaKnown RBP6.21□□□□□ -1.42
GTF3C3-207ENST00000451088 C8orf49Q96NF6 230 aa6.21□□□□□ -1.42
GTF3C3-207ENST00000451088 CD248Q9HCU0 757 aa6.21□□□□□ -1.42
GTF3C3-207ENST00000451088 INCENPQ9NQS7 918 aa6.21□□□□□ -1.42
GTF3C3-207ENST00000451088 MYRFQ9Y2G1 1151 aa6.21□□□□□ -1.42
GTF3C3-207ENST00000451088 PLEKHH2Q8IVE3 1493 aa6.21□□□□□ -1.42
GTF3C3-207ENST00000451088 SCAF11Q99590 1463 aaKnown RBP6.21□□□□□ -1.42
GTF3C3-207ENST00000451088 PREX2Q70Z35 1606 aa6.21□□□□□ -1.42
GTF3C3-207ENST00000451088 MTUS2Q5JR59 1369 aa6.2□□□□□ -1.42
GTF3C3-207ENST00000451088 CDC42BPAQ5VT25 1732 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms