RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 MAFO75444 373 aaPredicted RBP14.51□□□□□ -0.09
VPS33A-202ENST00000451053 CMA1P23946 247 aa14.51□□□□□ -0.09
VPS33A-202ENST00000451053 RFC5P40937 340 aa14.51□□□□□ -0.09
VPS33A-202ENST00000451053 POLGP54098 1239 aaPredicted RBP14.51□□□□□ -0.09
VPS33A-202ENST00000451053 MKRN4PQ13434 485 aaPredicted RBP14.51□□□□□ -0.09
VPS33A-202ENST00000451053 DRP2Q13474 957 aa14.51□□□□□ -0.09
VPS33A-202ENST00000451053 EMC2Q15006 297 aa14.51□□□□□ -0.09
VPS33A-202ENST00000451053 NAALADL2Q58DX5 795 aa14.51□□□□□ -0.09
VPS33A-202ENST00000451053 RRAGBQ5VZM2 374 aa14.51□□□□□ -0.09
VPS33A-202ENST00000451053 EFCAB12Q6NXP0 572 aa14.51□□□□□ -0.09
VPS33A-202ENST00000451053 CCDC73Q6ZRK6 1079 aa14.51□□□□□ -0.09
VPS33A-202ENST00000451053 METTL13Q8N6R0 699 aa14.51□□□□□ -0.09
VPS33A-202ENST00000451053 MRPS27Q92552 414 aaKnown RBP14.51□□□□□ -0.09
VPS33A-202ENST00000451053 RAD54LQ92698 747 aa14.51□□□□□ -0.09
VPS33A-202ENST00000451053 PPP1R12CQ9BZL4 782 aa14.51□□□□□ -0.09
VPS33A-202ENST00000451053 GOLPH3LQ9H4A5 285 aa14.51□□□□□ -0.09
VPS33A-202ENST00000451053 DHX33Q9H6R0 707 aaKnown RBP14.51□□□□□ -0.09
VPS33A-202ENST00000451053 SUGCTQ9HAC7 445 aa14.51□□□□□ -0.09
VPS33A-202ENST00000451053 XPNPEP1Q9NQW7 623 aa14.51□□□□□ -0.09
VPS33A-202ENST00000451053 FAM13BQ9NYF5 915 aa14.51□□□□□ -0.09
VPS33A-202ENST00000451053 A0A1B0GVL5 298 aa14.5□□□□□ -0.09
VPS33A-202ENST00000451053 RBAK-RBAKDNI3L0D1 243 aa14.5□□□□□ -0.09
VPS33A-202ENST00000451053 KIAA0355O15063 1070 aa14.5□□□□□ -0.09
VPS33A-202ENST00000451053 GADD45BO75293 160 aaPredicted RBP14.5□□□□□ -0.09
VPS33A-202ENST00000451053 SSBP05455 408 aaKnown RBP eCLIP14.5□□□□□ -0.09
VPS33A-202ENST00000451053 PLA2G4BP0C869 781 aa14.5□□□□□ -0.09
VPS33A-202ENST00000451053 PFKFB1P16118 471 aa14.5□□□□□ -0.09
VPS33A-202ENST00000451053 STAT6P42226 847 aa14.5□□□□□ -0.09
VPS33A-202ENST00000451053 MCM6Q14566 821 aa14.5□□□□□ -0.09
VPS33A-202ENST00000451053 E2F4Q16254 413 aa14.5□□□□□ -0.09
VPS33A-202ENST00000451053 KLHL40Q2TBA0 621 aa14.5□□□□□ -0.09
VPS33A-202ENST00000451053 TAF2Q6P1X5 1199 aa14.5□□□□□ -0.09
VPS33A-202ENST00000451053 PADI6Q6TGC4 694 aa14.5□□□□□ -0.09
VPS33A-202ENST00000451053 KIAA0319LQ8IZA0 1049 aa14.5□□□□□ -0.09
VPS33A-202ENST00000451053 KCTD17Q8N5Z5 321 aa14.5□□□□□ -0.09
VPS33A-202ENST00000451053 FSIP1Q8NA03 581 aa14.5□□□□□ -0.09
VPS33A-202ENST00000451053 DNAJB3Q8WWF6 145 aa14.5□□□□□ -0.09
VPS33A-202ENST00000451053 SLC7A3Q8WY07 619 aa14.5□□□□□ -0.09
VPS33A-202ENST00000451053 RUSC1Q9BVN2 902 aa14.5□□□□□ -0.09
VPS33A-202ENST00000451053 HIPK3Q9H422 1215 aa14.5□□□□□ -0.09
VPS33A-202ENST00000451053 ATP6V0A4Q9HBG4 840 aa14.5□□□□□ -0.09
VPS33A-202ENST00000451053 ZMYND8Q9ULU4 1186 aaPredicted RBP14.5□□□□□ -0.09
VPS33A-202ENST00000451053 HPSEQ9Y251 543 aa14.5□□□□□ -0.09
VPS33A-202ENST00000451053 TRAK2O60296 914 aa14.49□□□□□ -0.09
VPS33A-202ENST00000451053 DGAT1O75907 488 aa14.49□□□□□ -0.09
VPS33A-202ENST00000451053 CTSHP09668 335 aa14.49□□□□□ -0.09
VPS33A-202ENST00000451053 CKBP12277 381 aa14.49□□□□□ -0.09
VPS33A-202ENST00000451053 SYN1P17600 705 aa14.49□□□□□ -0.09
VPS33A-202ENST00000451053 ITGB8P26012 769 aa14.49□□□□□ -0.09
VPS33A-202ENST00000451053 CYP2C18P33260 490 aa14.49□□□□□ -0.09
VPS33A-202ENST00000451053 THPOP40225 353 aa14.49□□□□□ -0.09
VPS33A-202ENST00000451053 SLC12A3P55017 1021 aa14.49□□□□□ -0.09
VPS33A-202ENST00000451053 RBL2Q08999 1139 aa14.49□□□□□ -0.09
VPS33A-202ENST00000451053 DHX8Q14562 1220 aaKnown RBP14.49□□□□□ -0.09
VPS33A-202ENST00000451053 CCDC155Q8N6L0 562 aa14.49□□□□□ -0.09
VPS33A-202ENST00000451053 SYT2Q8N9I0 419 aaPredicted RBP14.49□□□□□ -0.09
VPS33A-202ENST00000451053 RETREG2Q8NC44 543 aa14.49□□□□□ -0.09
VPS33A-202ENST00000451053 CAGE1Q8TC20 777 aa14.49□□□□□ -0.09
VPS33A-202ENST00000451053 LARP4BQ92615 738 aaKnown RBP14.49□□□□□ -0.09
VPS33A-202ENST00000451053 SYAP1Q96A49 352 aaPredicted RBP14.49□□□□□ -0.09
VPS33A-202ENST00000451053 TMEM143Q96AN5 459 aa14.49□□□□□ -0.09
VPS33A-202ENST00000451053 DHX58Q96C10 678 aa14.49□□□□□ -0.09
VPS33A-202ENST00000451053 MTRQ99707 1265 aa14.49□□□□□ -0.09
VPS33A-202ENST00000451053 JPH2Q9BR39 696 aaPredicted RBP14.49□□□□□ -0.09
VPS33A-202ENST00000451053 PYM1Q9BRP8 204 aaKnown RBP14.49□□□□□ -0.09
VPS33A-202ENST00000451053 STK17AQ9UEE5 414 aa14.49□□□□□ -0.09
VPS33A-202ENST00000451053 KCNH3Q9ULD8 1083 aa14.49□□□□□ -0.09
VPS33A-202ENST00000451053 LOXHD1Q8IVV2 1947 aa14.49□□□□□ -0.09
VPS33A-202ENST00000451053 FAM237AA0A1B0GTK4 181 aa14.48□□□□□ -0.09
VPS33A-202ENST00000451053 POLR2DO15514 142 aaKnown RBP14.48□□□□□ -0.09
VPS33A-202ENST00000451053 VTNP04004 478 aa14.48□□□□□ -0.09
VPS33A-202ENST00000451053 CYP11B2P19099 503 aa14.48□□□□□ -0.09
VPS33A-202ENST00000451053 NDUFA8P51970 172 aa14.48□□□□□ -0.09
VPS33A-202ENST00000451053 TMEM62Q0P6H9 643 aa14.48□□□□□ -0.09
VPS33A-202ENST00000451053 BFSP2Q13515 415 aa14.48□□□□□ -0.09
VPS33A-202ENST00000451053 ZNF618Q5T7W0 954 aa14.48□□□□□ -0.09
VPS33A-202ENST00000451053 RINT1Q6NUQ1 792 aa14.48□□□□□ -0.09
VPS33A-202ENST00000451053 TRAF7Q6Q0C0 670 aa14.48□□□□□ -0.09
VPS33A-202ENST00000451053 C1orf186Q6ZWK4 172 aa14.48□□□□□ -0.09
VPS33A-202ENST00000451053 MAEAQ7L5Y9 396 aa14.48□□□□□ -0.09
VPS33A-202ENST00000451053 RPAINQ86UA6 219 aa14.48□□□□□ -0.09
VPS33A-202ENST00000451053 GPBP1Q86WP2 473 aa14.48□□□□□ -0.09
VPS33A-202ENST00000451053 MAP7D2Q96T17 732 aa14.48□□□□□ -0.09
VPS33A-202ENST00000451053 PPP1R16BQ96T49 567 aa14.48□□□□□ -0.09
VPS33A-202ENST00000451053 WNT8AQ9H1J5 351 aa14.48□□□□□ -0.09
VPS33A-202ENST00000451053 POLD4Q9HCU8 107 aa14.48□□□□□ -0.09
VPS33A-202ENST00000451053 GPRC5CQ9NQ84 441 aa14.48□□□□□ -0.09
VPS33A-202ENST00000451053 AKT3Q9Y243 479 aa14.48□□□□□ -0.09
VPS33A-202ENST00000451053 EVPLQ92817 2033 aa14.48□□□□□ -0.09
VPS33A-202ENST00000451053 NPHP3-ACAD11A0A0J9YXS1 232 aa14.47□□□□□ -0.09
VPS33A-202ENST00000451053 PITPNM1O00562 1244 aa14.47□□□□□ -0.09
VPS33A-202ENST00000451053 TIMP1P01033 207 aa14.47□□□□□ -0.09
VPS33A-202ENST00000451053 RAG1P15918 1043 aa14.47□□□□□ -0.09
VPS33A-202ENST00000451053 SELPP16109 830 aa14.47□□□□□ -0.09
VPS33A-202ENST00000451053 TMOD1P28289 359 aa14.47□□□□□ -0.09
VPS33A-202ENST00000451053 CCL23P55773 120 aa14.47□□□□□ -0.09
VPS33A-202ENST00000451053 MRPS6P82932 125 aaKnown RBP14.47□□□□□ -0.09
VPS33A-202ENST00000451053 FAM160A1Q05DH4 1040 aa14.47□□□□□ -0.09
VPS33A-202ENST00000451053 RAD51AP2Q09MP3 1159 aa14.47□□□□□ -0.09
VPS33A-202ENST00000451053 ARSHQ5FYA8 562 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms