RNA–Protein interactions for RNA: ENST00000449159.5

SMPD4-211, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 635 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-211ENST00000449159 KIAA1024Q9UPX6 916 aa11.88□□□□□ -0.51
SMPD4-211ENST00000449159 PCDHA2Q9Y5H9 948 aa11.88□□□□□ -0.51
SMPD4-211ENST00000449159 MORC2Q9Y6X9 1032 aaPredicted RBP11.88□□□□□ -0.51
SMPD4-211ENST00000449159 GBF1Q92538 1859 aa11.87□□□□□ -0.51
SMPD4-211ENST00000449159 MYH11P35749 1972 aa11.87□□□□□ -0.51
SMPD4-211ENST00000449159 RARRES1P49788 294 aa11.87□□□□□ -0.51
SMPD4-211ENST00000449159 RBL2Q08999 1139 aa11.87□□□□□ -0.51
SMPD4-211ENST00000449159 MKRN4PQ13434 485 aaPredicted RBP11.87□□□□□ -0.51
SMPD4-211ENST00000449159 MBTPS1Q14703 1052 aa11.87□□□□□ -0.51
SMPD4-211ENST00000449159 XKR9Q5GH70 373 aa11.87□□□□□ -0.51
SMPD4-211ENST00000449159 ZNF618Q5T7W0 954 aa11.87□□□□□ -0.51
SMPD4-211ENST00000449159 ATL3Q6DD88 541 aa11.87□□□□□ -0.51
SMPD4-211ENST00000449159 TAF2Q6P1X5 1199 aa11.87□□□□□ -0.51
SMPD4-211ENST00000449159 CABP7Q86V35 215 aa11.87□□□□□ -0.51
SMPD4-211ENST00000449159 CCDC155Q8N6L0 562 aa11.87□□□□□ -0.51
SMPD4-211ENST00000449159 LINC01465Q8N7H1 131 aa11.87□□□□□ -0.51
SMPD4-211ENST00000449159 CAGE1Q8TC20 777 aa11.87□□□□□ -0.51
SMPD4-211ENST00000449159 SYMPKQ92797 1274 aaKnown RBP11.87□□□□□ -0.51
SMPD4-211ENST00000449159 VWCEQ96DN2 955 aa11.87□□□□□ -0.51
SMPD4-211ENST00000449159 EPSTI1Q96J88 318 aa11.87□□□□□ -0.51
SMPD4-211ENST00000449159 CEP170P1Q96L14 293 aa11.87□□□□□ -0.51
SMPD4-211ENST00000449159 IPO9Q96P70 1041 aaKnown RBP11.87□□□□□ -0.51
SMPD4-211ENST00000449159 OSBPL7Q9BZF2 842 aa11.87□□□□□ -0.51
SMPD4-211ENST00000449159 GDPD2Q9HCC8 539 aa11.87□□□□□ -0.51
SMPD4-211ENST00000449159 CFAP45Q9UL16 551 aa11.87□□□□□ -0.51
SMPD4-211ENST00000449159 CIZ1Q9ULV3 898 aaPredicted RBP11.87□□□□□ -0.51
SMPD4-211ENST00000449159 ATP6V1DQ9Y5K8 247 aa11.87□□□□□ -0.51
SMPD4-211ENST00000449159 SMIM35A0A1B0GVV1 85 aa11.86□□□□□ -0.51
SMPD4-211ENST00000449159 E9PMD0 336 aa11.86□□□□□ -0.51
SMPD4-211ENST00000449159 PPP6R2O75170 966 aa11.86□□□□□ -0.51
SMPD4-211ENST00000449159 MAFO75444 373 aaPredicted RBP11.86□□□□□ -0.51
SMPD4-211ENST00000449159 IQCF3P0C7M6 154 aa11.86□□□□□ -0.51
SMPD4-211ENST00000449159 CSF2RAP15509 400 aa11.86□□□□□ -0.51
SMPD4-211ENST00000449159 SELPP16109 830 aa11.86□□□□□ -0.51
SMPD4-211ENST00000449159 UBA7P41226 1012 aa11.86□□□□□ -0.51
SMPD4-211ENST00000449159 POLGP54098 1239 aaPredicted RBP11.86□□□□□ -0.51
SMPD4-211ENST00000449159 EPHB4P54760 987 aa11.86□□□□□ -0.51
SMPD4-211ENST00000449159 KRT85P78386 507 aa11.86□□□□□ -0.51
SMPD4-211ENST00000449159 BFSP2Q13515 415 aa11.86□□□□□ -0.51
SMPD4-211ENST00000449159 EMC2Q15006 297 aa11.86□□□□□ -0.51
SMPD4-211ENST00000449159 KARSQ15046 597 aaKnown RBP11.86□□□□□ -0.51
SMPD4-211ENST00000449159 TMEM119Q4V9L6 283 aa11.86□□□□□ -0.51
SMPD4-211ENST00000449159 HYIQ5T013 277 aa11.86□□□□□ -0.51
SMPD4-211ENST00000449159 AXDND1Q5T1B0 1012 aaPredicted RBP11.86□□□□□ -0.51
SMPD4-211ENST00000449159 MFSD5Q6N075 450 aa11.86□□□□□ -0.51
SMPD4-211ENST00000449159 EFCAB12Q6NXP0 572 aa11.86□□□□□ -0.51
SMPD4-211ENST00000449159 LRRC8DQ7L1W4 858 aa11.86□□□□□ -0.51
SMPD4-211ENST00000449159 OTUD6AQ7L8S5 288 aa11.86□□□□□ -0.51
SMPD4-211ENST00000449159 KIAA0319LQ8IZA0 1049 aa11.86□□□□□ -0.51
SMPD4-211ENST00000449159 MAFAQ8NHW3 353 aaPredicted RBP11.86□□□□□ -0.51
SMPD4-211ENST00000449159 KCNG4Q8TDN1 519 aa11.86□□□□□ -0.51
SMPD4-211ENST00000449159 LEO1Q8WVC0 666 aaPredicted RBP11.86□□□□□ -0.51
SMPD4-211ENST00000449159 CCDC43Q96MW1 224 aaKnown RBP11.86□□□□□ -0.51
SMPD4-211ENST00000449159 NACC1Q96RE7 527 aa11.86□□□□□ -0.51
SMPD4-211ENST00000449159 PPP1R16BQ96T49 567 aa11.86□□□□□ -0.51
SMPD4-211ENST00000449159 SUGCTQ9HAC7 445 aa11.86□□□□□ -0.51
SMPD4-211ENST00000449159 ANKEF1Q9NU02 776 aa11.86□□□□□ -0.51
SMPD4-211ENST00000449159 DBR1Q9UK59 544 aaKnown RBP11.86□□□□□ -0.51
SMPD4-211ENST00000449159 RCOR1Q9UKL0 485 aa11.86□□□□□ -0.51
SMPD4-211ENST00000449159 PCDHA7Q9UN72 937 aa11.86□□□□□ -0.51
SMPD4-211ENST00000449159 KDM3AQ9Y4C1 1321 aa11.86□□□□□ -0.51
SMPD4-211ENST00000449159 A0A087X0B3 334 aa11.85□□□□□ -0.51
SMPD4-211ENST00000449159 IGKV6-21A0A0C4DH24 114 aa11.85□□□□□ -0.51
SMPD4-211ENST00000449159 MAGEB2O15479 319 aa11.85□□□□□ -0.51
SMPD4-211ENST00000449159 USO1O60763 962 aaKnown RBP11.85□□□□□ -0.51
SMPD4-211ENST00000449159 CUTAO60888 179 aa11.85□□□□□ -0.51
SMPD4-211ENST00000449159 CHRNA1P02708 482 aa11.85□□□□□ -0.51
SMPD4-211ENST00000449159 VTNP04004 478 aa11.85□□□□□ -0.51
SMPD4-211ENST00000449159 PLCG1P19174 1290 aa11.85□□□□□ -0.51
SMPD4-211ENST00000449159 MUTP22033 750 aa11.85□□□□□ -0.51
SMPD4-211ENST00000449159 ME1P48163 572 aa11.85□□□□□ -0.51
SMPD4-211ENST00000449159 MRPS6P82932 125 aaKnown RBP11.85□□□□□ -0.51
SMPD4-211ENST00000449159 SMAD3P84022 425 aaKnown RBP11.85□□□□□ -0.51
SMPD4-211ENST00000449159 FPGSQ05932 587 aa11.85□□□□□ -0.51
SMPD4-211ENST00000449159 MGAT3Q09327 533 aa11.85□□□□□ -0.51
SMPD4-211ENST00000449159 GPNMBQ14956 572 aa11.85□□□□□ -0.51
SMPD4-211ENST00000449159 SHHQ15465 462 aa11.85□□□□□ -0.51
SMPD4-211ENST00000449159 C9orf50Q5SZB4 431 aa11.85□□□□□ -0.51
SMPD4-211ENST00000449159 SHC4Q6S5L8 630 aa11.85□□□□□ -0.51
SMPD4-211ENST00000449159 RPAINQ86UA6 219 aa11.85□□□□□ -0.51
SMPD4-211ENST00000449159 RETREG2Q8NC44 543 aa11.85□□□□□ -0.51
SMPD4-211ENST00000449159 TMEM143Q96AN5 459 aa11.85□□□□□ -0.51
SMPD4-211ENST00000449159 CDK5RAP3Q96JB5 506 aa11.85□□□□□ -0.51
SMPD4-211ENST00000449159 ZNF668Q96K58 619 aaPredicted RBP11.85□□□□□ -0.51
SMPD4-211ENST00000449159 SPATA32Q96LK8 384 aa11.85□□□□□ -0.51
SMPD4-211ENST00000449159 BHMT2Q9H2M3 363 aa11.85□□□□□ -0.51
SMPD4-211ENST00000449159 DHX33Q9H6R0 707 aaKnown RBP11.85□□□□□ -0.51
SMPD4-211ENST00000449159 XPNPEP1Q9NQW7 623 aa11.85□□□□□ -0.51
SMPD4-211ENST00000449159 CHMP5Q9NZZ3 219 aa11.85□□□□□ -0.51
SMPD4-211ENST00000449159 STK24Q9Y6E0 443 aa11.85□□□□□ -0.51
SMPD4-211ENST00000449159 MICAL3Q7RTP6 2002 aa11.85□□□□□ -0.51
SMPD4-211ENST00000449159 PTPRSQ13332 1948 aa11.85□□□□□ -0.51
SMPD4-211ENST00000449159 CHD9Q3L8U1 2897 aa11.85□□□□□ -0.51
SMPD4-211ENST00000449159 RSPH10B2B2RC85 870 aa11.84□□□□□ -0.51
SMPD4-211ENST00000449159 NBNO60934 754 aa11.84□□□□□ -0.51
SMPD4-211ENST00000449159 CAND2O75155 1236 aa11.84□□□□□ -0.51
SMPD4-211ENST00000449159 EYA4O95677 639 aa11.84□□□□□ -0.51
SMPD4-211ENST00000449159 RSPH10BP0C881 870 aa11.84□□□□□ -0.51
SMPD4-211ENST00000449159 ACRP10323 421 aa11.84□□□□□ -0.51
SMPD4-211ENST00000449159 XRCC6P12956 609 aaKnown RBP eCLIP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms