RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 CTDNEP1O95476 244 aa22.17■■□□□ 1.14
VCP-203ENST00000448530 BMPR1AP36894 532 aa22.17■■□□□ 1.14
VCP-203ENST00000448530 TBC1D8BQ0IIM8 1120 aa22.17■■□□□ 1.14
VCP-203ENST00000448530 PIK3AP1Q6ZUJ8 805 aa22.17■■□□□ 1.14
VCP-203ENST00000448530 CMTR2Q8IYT2 770 aaKnown RBP22.17■■□□□ 1.14
VCP-203ENST00000448530 GTF3C6Q969F1 213 aa22.17■■□□□ 1.14
VCP-203ENST00000448530 ZNF689Q96CS4 500 aaPredicted RBP22.17■■□□□ 1.14
VCP-203ENST00000448530 SCLT1Q96NL6 688 aa22.17■■□□□ 1.14
VCP-203ENST00000448530 TMX1Q9H3N1 280 aa22.17■■□□□ 1.14
VCP-203ENST00000448530 RC3H2Q9HBD1 1191 aaKnown RBP22.17■■□□□ 1.14
VCP-203ENST00000448530 C1orf112Q9NSG2 853 aa22.17■■□□□ 1.14
VCP-203ENST00000448530 GJB4Q9NTQ9 266 aa22.17■■□□□ 1.14
VCP-203ENST00000448530 SEPT9Q9UHD8 586 aaPredicted RBP22.17■■□□□ 1.14
VCP-203ENST00000448530 ST3GAL5Q9UNP4 418 aa22.17■■□□□ 1.14
VCP-203ENST00000448530 TCF20Q9UGU0 1960 aaKnown RBP22.17■■□□□ 1.14
VCP-203ENST00000448530 DTNBO60941 627 aa22.16■■□□□ 1.14
VCP-203ENST00000448530 SARSP49591 514 aaKnown RBP22.16■■□□□ 1.14
VCP-203ENST00000448530 KCNQ1P51787 676 aa22.16■■□□□ 1.14
VCP-203ENST00000448530 NLRP11P59045 1033 aaKnown RBP22.16■■□□□ 1.14
VCP-203ENST00000448530 ME3Q16798 604 aa22.16■■□□□ 1.14
VCP-203ENST00000448530 XKR3Q5GH77 459 aa22.16■■□□□ 1.14
VCP-203ENST00000448530 PPP4R3AQ6IN85 833 aa22.16■■□□□ 1.14
VCP-203ENST00000448530 LRRC71Q8N4P6 559 aa22.16■■□□□ 1.14
VCP-203ENST00000448530 TMEM40Q8WWA1 233 aa22.16■■□□□ 1.14
VCP-203ENST00000448530 CLP1Q92989 425 aaKnown RBP22.16■■□□□ 1.14
VCP-203ENST00000448530 FAM20AQ96MK3 541 aa22.16■■□□□ 1.14
VCP-203ENST00000448530 ADAM2Q99965 735 aa22.16■■□□□ 1.14
VCP-203ENST00000448530 PCDHB7Q9Y5E2 793 aa22.16■■□□□ 1.14
VCP-203ENST00000448530 C5orf67F2Z3F1 127 aa22.15■■□□□ 1.14
VCP-203ENST00000448530 SLC37A4O43826 429 aa22.15■■□□□ 1.14
VCP-203ENST00000448530 CCNT1O60563 726 aaKnown RBP22.15■■□□□ 1.14
VCP-203ENST00000448530 GPR32O75388 356 aa22.15■■□□□ 1.14
VCP-203ENST00000448530 BMP1P13497 986 aa22.15■■□□□ 1.14
VCP-203ENST00000448530 KRT2P35908 639 aa22.15■■□□□ 1.14
VCP-203ENST00000448530 TRIM29Q14134 588 aa22.15■■□□□ 1.14
VCP-203ENST00000448530 PAN2Q504Q3 1202 aaKnown RBP22.15■■□□□ 1.14
VCP-203ENST00000448530 BANK1Q8NDB2 785 aa22.15■■□□□ 1.14
VCP-203ENST00000448530 OXER1Q8TDS5 423 aa22.15■■□□□ 1.14
VCP-203ENST00000448530 DNM2P50570 870 aa22.14■■□□□ 1.13
VCP-203ENST00000448530 MTERF2Q49AM1 385 aa22.14■■□□□ 1.13
VCP-203ENST00000448530 SLC24A5Q71RS6 500 aa22.14■■□□□ 1.13
VCP-203ENST00000448530 FAM228AQ86W67 206 aa22.14■■□□□ 1.13
VCP-203ENST00000448530 PLVAPQ9BX97 442 aa22.14■■□□□ 1.13
VCP-203ENST00000448530 NIFKQ9BYG3 293 aaKnown RBP22.14■■□□□ 1.13
VCP-203ENST00000448530 LMAN2LQ9H0V9 348 aa22.14■■□□□ 1.13
VCP-203ENST00000448530 RGS18Q9NS28 235 aa22.14■■□□□ 1.13
VCP-203ENST00000448530 DDX11L8A8MPP1 907 aa22.13■■□□□ 1.13
VCP-203ENST00000448530 MGEA5O60502 916 aa22.13■■□□□ 1.13
VCP-203ENST00000448530 DKC1O60832 514 aaKnown RBP eCLIP22.13■■□□□ 1.13
VCP-203ENST00000448530 BAG4O95429 457 aaKnown RBP22.13■■□□□ 1.13
VCP-203ENST00000448530 LARGE1O95461 756 aa22.13■■□□□ 1.13
VCP-203ENST00000448530 PSMC5P62195 406 aa22.13■■□□□ 1.13
VCP-203ENST00000448530 B3GNT9Q6UX72 402 aa22.13■■□□□ 1.13
VCP-203ENST00000448530 CRIPAKQ8N1N5 446 aa22.13■■□□□ 1.13
VCP-203ENST00000448530 LINC01465Q8N7H1 131 aa22.13■■□□□ 1.13
VCP-203ENST00000448530 NSUN3Q9H649 340 aaKnown RBP22.13■■□□□ 1.13
VCP-203ENST00000448530 UBE2ZQ9H832 354 aaPredicted RBP22.13■■□□□ 1.13
VCP-203ENST00000448530 MRPL42Q9Y6G3 142 aaKnown RBP22.13■■□□□ 1.13
VCP-203ENST00000448530 NCOR1O75376 2440 aa22.13■■□□□ 1.13
VCP-203ENST00000448530 BRWD1Q9NSI6 2320 aa22.13■■□□□ 1.13
VCP-203ENST00000448530 TBX3O15119 743 aa22.12■■□□□ 1.13
VCP-203ENST00000448530 SEC24BO95487 1268 aa22.12■■□□□ 1.13
VCP-203ENST00000448530 FDPSP14324 419 aaKnown RBP22.12■■□□□ 1.13
VCP-203ENST00000448530 ZSCAN20P17040 1043 aaPredicted RBP22.12■■□□□ 1.13
VCP-203ENST00000448530 EIF4BP23588 611 aaKnown RBP22.12■■□□□ 1.13
VCP-203ENST00000448530 PPP2R5CQ13362 524 aa22.12■■□□□ 1.13
VCP-203ENST00000448530 TARBP2Q15633 366 aaKnown RBP22.12■■□□□ 1.13
VCP-203ENST00000448530 NSUN7Q8NE18 718 aaKnown RBP22.12■■□□□ 1.13
VCP-203ENST00000448530 NLRP7Q8WX94 980 aa22.12■■□□□ 1.13
VCP-203ENST00000448530 ADAMTS10Q9H324 1103 aa22.12■■□□□ 1.13
VCP-203ENST00000448530 KCNMB3Q9NPA1 279 aa22.12■■□□□ 1.13
VCP-203ENST00000448530 C9IYK1 514 aa22.11■■□□□ 1.13
VCP-203ENST00000448530 LINC00271P0C7V0 271 aa22.11■■□□□ 1.13
VCP-203ENST00000448530 QARSP47897 775 aaKnown RBP22.11■■□□□ 1.13
VCP-203ENST00000448530 CDC42EP1Q00587 391 aa22.11■■□□□ 1.13
VCP-203ENST00000448530 NR5A1Q13285 461 aa22.11■■□□□ 1.13
VCP-203ENST00000448530 TCEAL5Q5H9L2 206 aa22.11■■□□□ 1.13
VCP-203ENST00000448530 SPOUT1Q5T280 376 aaKnown RBP22.11■■□□□ 1.13
VCP-203ENST00000448530 ZNF668Q96K58 619 aaPredicted RBP22.11■■□□□ 1.13
VCP-203ENST00000448530 JPH2Q9BR39 696 aaPredicted RBP22.11■■□□□ 1.13
VCP-203ENST00000448530 ATP6V0A4Q9HBG4 840 aa22.11■■□□□ 1.13
VCP-203ENST00000448530 VAV3Q9UKW4 847 aa22.11■■□□□ 1.13
VCP-203ENST00000448530 KIAA1671Q9BY89 1806 aa22.1■■□□□ 1.13
VCP-203ENST00000448530 TMEM150BA6NC51 233 aa22.1■■□□□ 1.13
VCP-203ENST00000448530 GRM6O15303 877 aa22.1■■□□□ 1.13
VCP-203ENST00000448530 KCNA5P22460 613 aa22.1■■□□□ 1.13
VCP-203ENST00000448530 GPC3P51654 580 aa22.1■■□□□ 1.13
VCP-203ENST00000448530 NAALADL2Q58DX5 795 aa22.1■■□□□ 1.13
VCP-203ENST00000448530 EP400NLQ6ZTU2 488 aa22.1■■□□□ 1.13
VCP-203ENST00000448530 SLFN12Q8IYM2 578 aa22.1■■□□□ 1.13
VCP-203ENST00000448530 P2RX5Q93086 422 aa22.1■■□□□ 1.13
VCP-203ENST00000448530 NECAB3Q96P71 396 aaPredicted RBP22.1■■□□□ 1.13
VCP-203ENST00000448530 TMEM161AQ9NX61 479 aa22.1■■□□□ 1.13
VCP-203ENST00000448530 SPTBN5Q9NRC6 3674 aaKnown RBP22.09■■□□□ 1.13
VCP-203ENST00000448530 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.09■■□□□ 1.13
VCP-203ENST00000448530 TBKBP1A7MCY6 615 aa22.09■■□□□ 1.13
VCP-203ENST00000448530 EML1O00423 815 aa22.09■■□□□ 1.13
VCP-203ENST00000448530 JAK2O60674 1132 aa22.09■■□□□ 1.13
VCP-203ENST00000448530 MMP1P03956 469 aa22.09■■□□□ 1.13
VCP-203ENST00000448530 P4HBP07237 508 aaKnown RBP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms