RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 TMX4Q9H1E5 349 aaPredicted RBP14.05□□□□□ -0.16
SHC1-210ENST00000448116 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.05□□□□□ -0.163e-6■■■■■ 103.2
SHC1-210ENST00000448116 FBXL5Q9UKA1 691 aa14.05□□□□□ -0.16
SHC1-210ENST00000448116 MYH7BA7E2Y1 1941 aa14.05□□□□□ -0.16
SHC1-210ENST00000448116 NRAPQ86VF7 1730 aa14.05□□□□□ -0.16
SHC1-210ENST00000448116 PPP1R37O75864 691 aa14.05□□□□□ -0.16
SHC1-210ENST00000448116 CFBP00751 764 aa14.05□□□□□ -0.16
SHC1-210ENST00000448116 SP8Q8IXZ3 490 aa14.05□□□□□ -0.16
SHC1-210ENST00000448116 LRRC57Q8N9N7 239 aa14.05□□□□□ -0.16
SHC1-210ENST00000448116 SCFD2Q8WU76 684 aa14.05□□□□□ -0.16
SHC1-210ENST00000448116 CRAMP1Q96RY5 1269 aa14.05□□□□□ -0.16
SHC1-210ENST00000448116 CYP3A7-CYP3A51PA0A087WV96 503 aa14.05□□□□□ -0.16
SHC1-210ENST00000448116 EVI5O60447 810 aa14.05□□□□□ -0.16
SHC1-210ENST00000448116 FGGP02679 453 aa14.05□□□□□ -0.16
SHC1-210ENST00000448116 TRIM49P0CI25 452 aa14.05□□□□□ -0.16
SHC1-210ENST00000448116 TRIM49CP0CI26 452 aa14.05□□□□□ -0.16
SHC1-210ENST00000448116 CYP3A7P24462 503 aa14.05□□□□□ -0.16
SHC1-210ENST00000448116 AP3B2Q13367 1082 aa14.05□□□□□ -0.16
SHC1-210ENST00000448116 LRRC45Q96CN5 670 aa14.05□□□□□ -0.16
SHC1-210ENST00000448116 EFCC1Q9HA90 598 aa14.05□□□□□ -0.16
SHC1-210ENST00000448116 ASTN1O14525 1302 aa14.04□□□□□ -0.16
SHC1-210ENST00000448116 PPP1R12BO60237 982 aaPredicted RBP14.04□□□□□ -0.16
SHC1-210ENST00000448116 HSPA9P38646 679 aaKnown RBP14.04□□□□□ -0.16
SHC1-210ENST00000448116 MDH1P40925 334 aaKnown RBP14.04□□□□□ -0.16
SHC1-210ENST00000448116 CALR3Q96L12 384 aaKnown RBP14.04□□□□□ -0.16
SHC1-210ENST00000448116 GOPCQ9HD26 462 aa14.04□□□□□ -0.16
SHC1-210ENST00000448116 AMFRQ9UKV5 643 aa14.04□□□□□ -0.16
SHC1-210ENST00000448116 A6NNZ2 444 aa14.04□□□□□ -0.16
SHC1-210ENST00000448116 HMGB1P1B2RPK0 211 aaPredicted RBP14.04□□□□□ -0.16
SHC1-210ENST00000448116 NDUFB10O96000 172 aa14.04□□□□□ -0.16
SHC1-210ENST00000448116 TMOD1P28289 359 aa14.04□□□□□ -0.16
SHC1-210ENST00000448116 GTF2A1P52655 376 aaPredicted RBP14.04□□□□□ -0.16
SHC1-210ENST00000448116 ZNF211Q13398 564 aaPredicted RBP14.04□□□□□ -0.16
SHC1-210ENST00000448116 TUBB8Q3ZCM7 444 aa14.04□□□□□ -0.16
SHC1-210ENST00000448116 MREGQ8N565 214 aa14.04□□□□□ -0.16
SHC1-210ENST00000448116 ACTRT1Q8TDG2 376 aa14.04□□□□□ -0.16
SHC1-210ENST00000448116 DCAF4Q8WV16 495 aa14.04□□□□□ -0.16
SHC1-210ENST00000448116 CCT8L2Q96SF2 557 aa14.04□□□□□ -0.16
SHC1-210ENST00000448116 EPN3Q9H201 632 aa14.04□□□□□ -0.16
SHC1-210ENST00000448116 SIX2Q9NPC8 291 aa14.04□□□□□ -0.16
SHC1-210ENST00000448116 DNAJC12Q9UKB3 198 aa14.04□□□□□ -0.16
SHC1-210ENST00000448116 SBF2Q86WG5 1849 aa14.04□□□□□ -0.16
SHC1-210ENST00000448116 LRRN2O75325 713 aa14.03□□□□□ -0.16
SHC1-210ENST00000448116 HOXA10P31260 410 aaPredicted RBP14.03□□□□□ -0.16
SHC1-210ENST00000448116 HDLBPQ00341 1268 aaKnown RBP14.03□□□□□ -0.16
SHC1-210ENST00000448116 IFFO1Q0D2I5 559 aa14.03□□□□□ -0.16
SHC1-210ENST00000448116 SF3A3Q12874 501 aaKnown RBP eCLIP14.03□□□□□ -0.162e-7■■■□□ 15.9
SHC1-210ENST00000448116 IFT88Q13099 833 aa14.03□□□□□ -0.16
SHC1-210ENST00000448116 DRAP1Q14919 205 aaPredicted RBP14.03□□□□□ -0.16
SHC1-210ENST00000448116 PTGISQ16647 500 aa14.03□□□□□ -0.16
SHC1-210ENST00000448116 RINT1Q6NUQ1 792 aa14.03□□□□□ -0.16
SHC1-210ENST00000448116 ZNF473Q8WTR7 871 aaKnown RBP14.03□□□□□ -0.16
SHC1-210ENST00000448116 KAT2BQ92831 832 aa14.03□□□□□ -0.16
SHC1-210ENST00000448116 LENG9Q96B70 501 aa14.03□□□□□ -0.16
SHC1-210ENST00000448116 DYDC2Q96IM9 177 aa14.03□□□□□ -0.16
SHC1-210ENST00000448116 TRIM51Q9BSJ1 452 aa14.03□□□□□ -0.16
SHC1-210ENST00000448116 TMEM59LQ9UK28 342 aa14.03□□□□□ -0.16
SHC1-210ENST00000448116 TMEM110-MUSTN1A8MSY1 372 aa14.03□□□□□ -0.16
SHC1-210ENST00000448116 BUB1BO60566 1050 aaPredicted RBP14.03□□□□□ -0.16
SHC1-210ENST00000448116 FERP16591 822 aa14.03□□□□□ -0.16
SHC1-210ENST00000448116 DHX9Q08211 1270 aaKnown RBP14.03□□□□□ -0.16
SHC1-210ENST00000448116 CUL1Q13616 776 aa14.03□□□□□ -0.16
SHC1-210ENST00000448116 SYDE2Q5VT97 1194 aa14.03□□□□□ -0.16
SHC1-210ENST00000448116 DPY19L2P1Q6NXN4 242 aa14.03□□□□□ -0.16
SHC1-210ENST00000448116 EPM2AIP1Q7L775 607 aaPredicted RBP14.03□□□□□ -0.16
SHC1-210ENST00000448116 NLRP14Q86W24 1093 aa14.03□□□□□ -0.16
SHC1-210ENST00000448116 ZC3H3Q8IXZ2 948 aaKnown RBP14.03□□□□□ -0.16
SHC1-210ENST00000448116 CCDC26Q8TAB7 109 aa14.03□□□□□ -0.16
SHC1-210ENST00000448116 NOVA2Q9UNW9 492 aaKnown RBP14.03□□□□□ -0.16
SHC1-210ENST00000448116 PSMC2P35998 433 aaKnown RBP14.03□□□□□ -0.16
SHC1-210ENST00000448116 USP8P40818 1118 aa14.03□□□□□ -0.16
SHC1-210ENST00000448116 UAP1Q16222 522 aaPredicted RBP14.03□□□□□ -0.16
SHC1-210ENST00000448116 ABCB5Q2M3G0 1257 aa14.03□□□□□ -0.16
SHC1-210ENST00000448116 SLC35G2Q8TBE7 412 aa14.03□□□□□ -0.16
SHC1-210ENST00000448116 CTNNBL1Q8WYA6 563 aaPredicted RBP14.03□□□□□ -0.16
SHC1-210ENST00000448116 FAM20AQ96MK3 541 aa14.03□□□□□ -0.16
SHC1-210ENST00000448116 TMBIM4Q9HC24 238 aa14.03□□□□□ -0.16
SHC1-210ENST00000448116 PKD2L1Q9P0L9 805 aa14.03□□□□□ -0.16
SHC1-210ENST00000448116 PI4KBQ9UBF8 816 aa14.03□□□□□ -0.16
SHC1-210ENST00000448116 NR2E1Q9Y466 385 aa14.03□□□□□ -0.16
SHC1-210ENST00000448116 TGFB1I1O43294 461 aa14.02□□□□□ -0.16
SHC1-210ENST00000448116 EYA4O95677 639 aa14.02□□□□□ -0.16
SHC1-210ENST00000448116 GH2P01242 217 aa14.02□□□□□ -0.16
SHC1-210ENST00000448116 TNFAIP3P21580 790 aa14.02□□□□□ -0.16
SHC1-210ENST00000448116 KRT71Q3SY84 523 aa14.02□□□□□ -0.16
SHC1-210ENST00000448116 ICE2Q659A1 982 aa14.02□□□□□ -0.16
SHC1-210ENST00000448116 HS2ST1Q7LGA3 356 aa14.02□□□□□ -0.16
SHC1-210ENST00000448116 SIAH1Q8IUQ4 282 aa14.02□□□□□ -0.16
SHC1-210ENST00000448116 SYCP3Q8IZU3 236 aa14.02□□□□□ -0.16
SHC1-210ENST00000448116 LNX1Q8TBB1 728 aaPredicted RBP14.02□□□□□ -0.16
SHC1-210ENST00000448116 NYAP2Q9P242 653 aa14.02□□□□□ -0.16
SHC1-210ENST00000448116 ATP8A1Q9Y2Q0 1164 aa14.02□□□□□ -0.16
SHC1-210ENST00000448116 UTP11Q9Y3A2 253 aaKnown RBP14.02□□□□□ -0.16
SHC1-210ENST00000448116 SMIM23A6NLE4 172 aa14.02□□□□□ -0.17
SHC1-210ENST00000448116 ADRA2BP18089 450 aa14.02□□□□□ -0.17
SHC1-210ENST00000448116 PRKCIP41743 596 aa14.02□□□□□ -0.17
SHC1-210ENST00000448116 ITGB3BPQ13352 177 aaPredicted RBP14.02□□□□□ -0.17
SHC1-210ENST00000448116 CCDC174Q6PII3 467 aa14.02□□□□□ -0.17
SHC1-210ENST00000448116 HHIPL2Q6UWX4 724 aa14.02□□□□□ -0.17
SHC1-210ENST00000448116 NT5DC3Q86UY8 548 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms